Frankliniella occidentalis (western flower thrips): 113205880
Help
Entry
113205880 CDS
T07591
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113205880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113205880
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113205880
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113205880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
113205880
NCBI-ProteinID:
XP_026277442
UniProt:
A0A6J1S8R4
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MQNIKIRLASERVNTSLTFGEEGAPHLYTPGETITDNQRVMSGHGTYMDEENKEVLKASV
AGTVERVNQLICVRPIKCRYMGEIGDVVVGRITEVQQKRWKVETNARLDSVLLISSVNLP
GGELRRRSAEDEQMMRKYLQEGDLVSAEVQSVFSDGSLSLHTRSLKYGKLSQGVLVKVPP
SLILRRKNHFHNLLCGASVILGNNGLIWIYPTSPEDDSGVGGFTQNLEQVIDKEDRERIA
RLRNCILSISASKLMLFDSSIQYAFEESLNYSIKELLTPEVMLDVAFRTRHRLQAYKDS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacattaagataagacttgcctcggagcgagtgaatacctctctgactttcgga
gaggagggagctccgcatttatatacacctggagaaaccatcaccgacaaccaacgtgtt
atgagtggtcatggtacttacatggatgaagaaaataaagaggttctgaaagcctccgtt
gctggcacagttgaacgtgtcaaccaattgatttgtgttcgtcccatcaaatgccgttat
atgggggaaataggagatgttgttgtcggaagaataaccgaagttcaacagaagcgctgg
aaagttgaaacaaatgcacgccttgactcggtcctgttaatatcatctgtgaacttgcct
ggcggtgaattgagaagaagatctgctgaggatgaacagatgatgcggaaatatctacag
gaaggtgatcttgtcagtgcagaagtacagagcgtcttttcagatggttccctttcatta
catactaggagtttgaagtatggaaagctttctcaaggggtacttgtaaaagtaccacct
tctcttatcttgaggaggaaaaatcactttcacaatttactttgtggggccagtgttatt
cttggtaacaatggtcttatttggatttatcccactagtccagaggatgatagtggagtt
ggtggtttcacccagaatttagaacaggttattgacaaggaggatagagaaagaatagca
cggttacggaattgtattttgtcgatttctgcaagcaagctgatgttatttgattcctct
attcaatatgcctttgaagaatcattgaattactctatcaaagagttattaactcctgag
gtgatgttggatgttgcttttcgcacaagacataggctccaagcttacaaagactcttag
DBGET
integrated database retrieval system
