Frankliniella occidentalis (western flower thrips): 113205917
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Entry
113205917 CDS
T07591
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113205917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113205917
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113205917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
Suf
TPR_14
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
KIX_2
Motif
Other DBs
NCBI-GeneID:
113205917
NCBI-ProteinID:
XP_026277503
UniProt:
A0A6J1SA47
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MAEFVELRTEEMLPEVEQMERMLMFEKEELRTIAKKRKEFEYKIQRRTKNKEDYLRYIQY
EMDLLKLIRLRREKMGYQQKKANIDFTIGNRVNKLFKQAIFRFQDDVRLWLSYIKFCKQV
RFYSCVSRMLVRMLQVHSDKPQLWKLAAKWEFEESQSVENARQFLLRGLRAHPESRLLYA
EAFRMELHYAAKKRAELEEAKKKQQEGDLAVAGTSTKDSNESSAESKSSGVTFHGDVVPD
QVAEGRLAELIYESAMKKVDGVAFIIQLLDIAKEFSFTGKLQKKIVEDLLNKYPDEELTW
DTMARRELEGLTYSDPHNSNQSPLEPLLGVTADNSSIPLSPEGANTMEVDDDNSELNEKK
GKSNLTQRLRLCCEVYEAVVKKINTEKMWSLYLDTMLEANSDQAHLPCYKKKLLKHALQG
AHNAGKLQEKYYLHWIEMLQTAGKSKKARDVLKSGTERIPTSAELWQLRLRFHLSRDEEI
IAEEVFHSALENLGTDPESVLPLWKIQLQYCQTKSPAKTEALFEKGLNAAPNVATALRPL
YLEWLCLSRGIRDARAAYDKLCLQPPLSLDLHTKMAALESMQTTAIMKQVRKCHENASSQ
FGKDNADVWMDYVKFEMKRGEPKNISNIYLRAVRQLEPIQADIFIHEFSLVKTCMAAPQT
PDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatttgtggaactccgtacggaggaaatgctcccggaggtggagcagatggaa
cgtatgttaatgttcgaaaaagaagagttgagaaccatagcgaaaaagaggaaagagttt
gaatacaaaattcaaagacgcaccaaaaataaagaagattatttaagatatattcaatat
gaaatggatttgttgaaattgatacgtctaaggagagaaaaaatgggatatcaacagaag
aaagccaatatagacttcactattggaaacagagttaataaactttttaagcaggccata
ttccgttttcaagatgatgttcgtttgtggctctcttatattaaattttgtaaacaagtg
cgtttctatagctgtgtcagtcgaatgcttgttcgaatgttgcaagttcacagtgataaa
ccacaattgtggaaacttgctgcaaagtgggaattcgaagagagtcaatctgttgaaaat
gctcgtcagtttttactgagaggtttacgtgctcatccggagtctcgattgctatatgcg
gaagcattccgtatggaattacattatgctgccaaaaaaagagccgagctggaggaagca
aaaaagaagcagcaggaaggtgacttggctgttgctggaacaagtacaaaagattccaat
gaatccagtgctgaaagtaagagcagtggagtaaccttccatggagatgtggttcctgac
caggtggcagaaggtagattagctgagctgatttatgaatcagctatgaagaaggtagat
ggagttgctttcatcatacagttgttggatattgctaaagaatttagcttcactggaaaa
ttgcagaagaagattgttgaggatttattaaacaaatacccagatgaagaactgacctgg
gataccatggcaagaagagaacttgaaggcctgacttattcagacccacacaattcaaac
caatcgcctttagagccattacttggagttacagcggacaattcttccatccccctcagt
ccagagggagcaaacacaatggaagttgatgatgataattctgaacttaacgagaagaag
gggaaatcaaatttaacacaaaggctaagactttgctgtgaagtttatgaggcagttgta
aagaagatcaatactgaaaaaatgtggtcattatacctagacactatgctggaagcaaat
tctgaccaagctcatcttccttgttacaagaagaaacttttaaagcatgctctgcaaggt
gcccataatgctggaaaattgcaagaaaaatattatttacattggattgaaatgcttcag
actgctggcaagtccaaaaaggctagagatgttttaaagtcaggtacagagcggattcca
accagtgcagaattatggcaactacgattgcgttttcatctttctagagatgaagaaatt
attgcagaagaagtatttcattcagcacttgaaaacctaggaactgatccagagagtgtt
ttacccttatggaagatacagctgcagtactgtcaaactaaaagtccagctaaaacagag
gccctttttgaaaaaggtctcaatgctgctccaaatgtggccactgctttgcgacctctc
tacctagaatggctgtgcctgtcacgcggtattcgtgatgccagggctgcttacgacaag
ctgtgcttgcagcctccactaagtctcgaccttcacactaaaatggcagcccttgaatct
atgcagaccactgcaataatgaagcaagtgcgaaaatgtcatgaaaatgcttccagtcag
tttggcaaagataatgcagatgtgtggatggattacgtaaaatttgaaatgaaaagggga
gaacccaagaacatcagcaacatatatctcagagctgttcgccaattagaaccaatccag
gcagacatctttatccatgaattttctttagtgaaaacctgtatggcagccccgcagaca
cctgactcttaa
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