Frankliniella occidentalis (western flower thrips): 113205983
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Entry
113205983 CDS
T07591
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113205983
Enzymes [BR:
foc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113205983
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
Pre-60S particles
Helicases
113205983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Helicase_C_2
AAA_22
Beta-Casp
Motif
Other DBs
NCBI-GeneID:
113205983
NCBI-ProteinID:
XP_026277617
UniProt:
A0A6J1S981
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MKVKWEECKFKISKICLNTIAKFGFKTMTPVQAACIPLLLSNKDVAAEAVTGSGKTLAFI
IPAMELLMRREEKWKPLEVGVVVISPTRELASQIYEVLTPFLETHNKMKPNHKLQALLLL
GGNSVEADIALLRDKGANILIATPGRLEDILEHHTDVCLKPALKSLELLVLDEADRLLDL
GFERTLNTILAHLPRQRRTGLFSATQTKEIELLMRAGMRNPVQVTVREKAGSNEEVSTPA
SLSNHYAIIEPENKLAAIVGFLSSESSQNPDKPGKYMIFFATIACVNYFSTVLSSVLKNL
PVFCIHGKMKDARFKVFDKFRAADKGVLVCTDVMARGVDIPAVKWVLQCDVPKSASAFVH
RCGRTARSGLSGSAIIFLMPNEDSYVTFIQKNQKVTLHEKEVPLADSNEILNVARHLQKT
DRANLEKAQKAFVSYVQAYSKHECNILLRLKDVNLGLLATGFGLLQLPKMPELRKADTSG
FVPDVIDFNTIAFKDKQREAARQGKLTSYRETGVWPSKKNAKMSQKKSEPWAQSKARKEE
RKEKKNLRKKKKEELKAQGVAPTKKRKRGICAEDIKDIADDIALMKKLKKKKISEKEFDK
EFGLEQD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaaatgggaagaatgcaaatttaaaatcagcaaaatatgcttgaatactata
gctaagtttggttttaagaccatgacaccagtacaggccgcttgcattcccttactactc
tccaacaaggatgttgctgcagaagccgtaacagggagtggaaaaacacttgcattcatc
atacctgctatggaacttctaatgcgtcgagaagaaaaatggaaacctcttgaagttgga
gttgttgttatttcacctactcgcgagctggctagccagatatacgaggttttgacacct
ttcctagaaacacacaataaaatgaaacccaatcacaaactgcaggcattgcttctgctt
ggtggaaactctgttgaagctgatatagccctcctgagggataaaggagcaaatatatta
atagcgactcctggtagattagaagatattctcgaacatcacactgatgtatgtctcaaa
ccagcattaaaatccttggagcttctagtcttagatgaagcagatcgactactagacttg
ggttttgaacgtactttgaatactatcttggcacacctacctcgtcaaaggagaacaggt
cttttttctgctactcaaacaaaagaaatagagctcctgatgcgtgctggaatgcgaaat
ccagttcaagtaacagttcgagaaaaggcagggagcaatgaagaagtgtcaacacctgct
agccttagcaatcattatgcaattatagagccagaaaataagttagctgccatagtaggt
ttcctttcttctgaatcctctcaaaatccagacaagccaggaaaatacatgatttttttt
gcaaccattgcatgtgttaattatttctctacagttctgtcaagtgtactgaaaaacctt
cccgtattttgtatacatgggaagatgaaggatgctcgtttcaaagtttttgacaaattt
agagctgcagataaaggtgttttagtgtgcactgatgttatggctagaggggtagatatt
cctgctgtgaaatgggtacttcagtgtgatgtgcccaagtctgcatctgcatttgttcat
agatgtggacgtactgctcgttctggactatctggatctgctataatatttttaatgccc
aatgaagattcctatgtaacttttattcaaaaaaaccaaaaggttactcttcatgaaaaa
gaagttcccctcgctgactctaatgagatactaaacgttgcccgccacctgcagaaaaca
gacagagcaaatctagaaaaggctcagaaagcctttgtttcatatgtacaggcatatagt
aaacatgaatgtaatatacttcttcgtctgaaagatgttaacttaggcttattggcaact
ggttttggattacttcaactgccaaagatgccagaacttagaaaggctgacacctcaggc
tttgtcccagatgtcattgatttcaataccatagcattcaaagacaaacagcgagaagct
gcaagacagggtaaacttacttcctacagagaaactggagtgtggccatctaagaagaat
gcaaaaatgagtcagaaaaagtcagagccatgggctcagtccaaagctcgcaaagaagaa
cgaaaagaaaagaaaaatcttaggaagaaaaagaaggaagagttgaaggcgcaaggagta
gctcctacaaagaagaggaaaaggggaatctgtgctgaagatattaaggacattgctgat
gatattgctctaatgaagaaacttaaaaagaaaaaaatatctgaaaaagagtttgacaag
gagtttggactggaacaagattaa
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