Frankliniella occidentalis (western flower thrips): 113206166
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Entry
113206166 CDS
T07591
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
foc03041
]
113206166
Spliceosome [BR:
foc03041
]
Common components
Common spliceosomal components
General mRNP proteins
113206166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
Nup35_RRM_2
RBD_DEAH11
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
113206166
NCBI-ProteinID:
XP_026277893
UniProt:
A0A6J1SB75
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MAEDFDVEAMLEAPYKKGEDGPITKISRENGTSESKSSGKSKRKSRSRSRDRKEREKKGD
RSRDRDRGRDTEKSGDRGGDRGGDRVSARGGDRGGDRGRDRDRKHRSRSRDGKHRSGSKE
RKHRSGSSGGSRERRRKRSLTPMLLPRRDRGNGKRKGLDRSPPAVLGKPDELTPEERDLR
TVFCMQLSQRIRARDLEEFFSSVGKVRDVRLIKCNKTRRFKGIAYVEFKDPESVPLAMGL
AGQKLLGVPIIVQPTQAEKNRAGNSMPNLQPKGQPGPMRLYVGSLHFNITEDMLRGIFEP
FGKIDNIQLIMDAETGRSKGYGFLTFHNSEDAKKALEQLNGFELAGRPMKVGNVTERTEN
AQGPSILDTDELDRTGIDLGATGRLQLMYKLAEGTGLQIPAPAAAALNLNTTTGVPIATA
QPAPPIATQCFMLANMFDPATETNPTWDIEIRDDVIDECNKHGGVLHVYVDKASPTGNVY
VKCPTIATAVAAVNSLHGRWFAGRMITAAYVPLVNYHNLFPDTINALQLLVPTRRGP
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacttcgacgttgaggcgatgctggaggcgccgtacaagaaaggagaagat
ggccccatcaccaaaatctcaagagaaaatgggacgtcggaaagcaagtcctcggggaaa
agcaaacgcaagagtcgcagccgatcgcgggacaggaaagagcgggaaaagaagggagac
agaagccgagacagagatcgtggccgagacacagaaaaaagtggggatcgtggaggggat
cgtggcggcgaccgtgtcagcgctcgtggtggggatcgcggcggggatcgcggcagggat
cgcgatcggaagcatcgcagccgtagccgggacggaaaacaccgcagcggcagcaaagag
cgcaagcatcgcagcggcagcagcggcggcagccgcgagcgtcgccgcaagcgctcgctg
accccaatgcttctgccccgaagagatcgggggaatggaaagcgtaaaggtttggatagg
agtcccccagctgtcctgggaaagccggacgaacttacaccagaagagcgtgatttgcga
acagtgttctgcatgcagttatcacaaagaatcagggcaagggaccttgaagaattcttt
tcatctgttggaaaggtccgagacgtcagacttatcaaatgtaataaaactaggcgcttt
aaaggcattgcatatgtggagttcaaggatccagaatctgttcccttagccatgggttta
gctggacagaaattgttgggtgtccctattattgttcaaccaactcaggctgaaaagaat
agagcaggaaattcaatgcccaatcttcaacctaaaggacaaccaggtccaatgaggtta
tatgttggctcattgcatttcaacatcactgaagatatgcttagaggtatttttgaacca
tttggaaaaattgacaacattcagctcataatggatgctgaaactggacgttcaaagggt
tatggatttttaactttccacaattcagaagatgcaaagaaggctctagaacaattaaac
ggttttgagcttgctggaagacctatgaaagttggaaatgttactgaaagaactgaaaac
gcgcaaggaccctccatacttgacacagacgaacttgatcgtactggtattgatcttggt
gctacaggacggttacagcttatgtataaacttgctgaaggaactggtcttcaaatccct
gcccccgcagctgctgcactaaacctgaatacaacaactggtgtaccaattgctacagct
cagcctgcaccccccatagcaactcagtgctttatgctggctaacatgtttgatccagca
acggaaaccaaccccacctgggatattgaaattagagacgatgttatagacgaatgtaac
aaacatggtggagttttacatgtttatgttgacaaggcctcacccactggcaatgtgtat
gttaagtgcccaaccattgctaccgctgttgctgctgttaattctcttcatgggagatgg
tttgcaggacgaatgattactgctgcatatgtacctttggtgaactaccacaatctcttc
cctgacacaatcaatgcgttgcagctattagtgcctacaagacgaggcccttga
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