Frankliniella occidentalis (western flower thrips): 113206223
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Entry
113206223 CDS
T07591
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113206223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113206223
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
Pre-60S particles
RNases
113206223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
Motif
Other DBs
NCBI-GeneID:
113206223
NCBI-ProteinID:
XP_026277990
UniProt:
A0A6J1SF89
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MLPSLGLFSSLECPFYNGGAGQCSRPYCHYRHAKKDPNAAAEPSDEIVGQIPTNEVLQAE
DDVKAGTSSEPVHKSRSSLYKAIVDAAPAYSPTPIAQLKSSHIPIPYTPTIPTRSSAVKK
SKPSSEYVPHYIGTSRPTYPPYCPSSISSLNSQSNTPGDPLKNPLYELYGPEGAQYSPND
VDPVGTGYSYSPGSTSYTPYSPEYVPSKVNYNPQFSPPDSQLSDDDDNVDLAAETAAQTN
GDPGGGENLIDLSELDNLELEFEDDLDNGNDTIMSEIDVKSGGDKELSLESNVMDTDSPV
EGAQNQRKSSSSQKAEKRRSSTTSSASDSKKHKSSHESTDKIKSETSKDKAHQSSSDKNG
HKDKKTSSSSKKSLSSSSSSNSKKNSSHSSSSKSSSSSLSKSSKTSSSTDVKKGHSSSDS
KSKTGSSTSSSSSSKHKEKHRDKERSKEKEKDRTHGKTKDKEKDKDRERIKDKNSKKSSR
RASDDKDKGDIQREKIEEEIRKLEVELDASLEDEDTIEQQCYEMFNEYSESLQNQPLPEK
TEDQRVTVNEEPVASASSKKRIAHQASQSYLQPNPQPVPTLAKKCSPYQVMRDRWELLKK
EKLQTLEAKRASLAVAPPLVPKAVAPTPYSLTNAPQASLPGSGSVSGKKRIAGVPNVAML
LKPPATSTSSSSTSGTSPNRFYNKTAQRVDEFGRLVKVRVAHAPNMDTPAMRKPVVNPSD
CRKFKVATRQANVNKLFQAYIDARFGDASHDMALESERNSTQGTESLGVYSHRIIQILKD
LRACAETSQNGPKMDGMSGIPNRVVSHNAMLAGKLGAKVSWSIQTGKKEDQPKPNLSLYE
QLQSYVLTKEKLQENGFPMPCGEKGCASIKPSSYRTVTQPSDPRQKICVRCLKPYAVNKR
GEQVKDEECFFHWGRKYKRYREVETKYSCCDSAGSGCSVSPYHVFEQDWEKSTGYMSTIS
KPWMESDPGVYALDCEMCYTTGGLELTRVTVIRDDLTVAYETLVKPGHKILDYNTRYSGI
TEEDLKDVTTNILQVQATLLGMFCDKTILIGHSLESDMKALKLIHPTVVDTSVVFPHKMG
PPQKRALRNLAADYLKKIIQNDVGGHDSKEDAVAALELMLWKLKEDEKTR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgctaccatcattgggtttattctcatcactggaatgccctttttacaacggaggtgca
gggcagtgttctcgcccctattgtcattacagacatgccaaaaaagatcccaatgctgct
gctgagccaagcgatgagattgtgggtcaaatacccaccaatgaagtactgcaggcggaa
gatgatgtcaaggctggtacaagcagcgaacctgtccacaagagcagatcctctttgtac
aaggctattgttgatgcagcaccagcatacagcccaactccaattgctcagttgaaatct
tcccatataccaataccttatactccaaccattcctacaagaagttccgcggtaaagaaa
agcaaacctagttcagaatatgtaccacattacataggtacaagtcgtccaacctatcct
ccgtactgcccatcatccattagcagcctaaattctcaaagtaatactcctggtgatcct
ctcaaaaacccactctatgaattatatggacctgaaggtgcacaatacagtcctaatgat
gttgatcctgttggaactggctactcgtattcccctggaagtacctcttatactccatat
tcaccagaatatgtaccttctaaagtaaactacaacccccagtttagtcccccagattct
caattatcagatgatgatgacaatgtagacttagctgcagagactgctgctcaaacaaat
ggagacccagggggtggagagaacctcatagacctctctgaacttgacaacctcgagttg
gagttcgaagatgatttagataatggaaatgatacaattatgagtgaaattgatgtgaaa
tctggtggtgacaaagaactatcacttgaatcaaatgttatggacactgatagtccagtg
gaaggtgcacagaatcaaagaaaaagtagttcctctcagaaagcagaaaagcgcaggagt
agtaccaccagttctgccagtgattcaaagaaacataagtcttctcatgaaagtacagat
aaaatcaaaagtgaaacaagtaaggataaagctcatcaaagcagtagtgataaaaatgga
cacaaggataagaaaacatcctcatcgtcaaagaaaagtttgagctccagcagcagcagt
aacagtaaaaagaatagcagtcacagcagtagtagtaaaagttcatcatcatcattatca
aagtcatcaaaaacctcttcaagcactgatgtgaaaaaaggtcattcatcatcagattca
aaaagcaaaactggatcctcaacttcaagcagttccagttctaagcataaggagaaacat
cgtgacaaagaaagatccaaagaaaaggaaaaagataggacccatggaaaaactaaggat
aaagagaaggataaagatagagaaagaatcaaggacaaaaacagtaagaaatcttcacgt
cgagcatctgatgataaagacaagggagacattcagcgagaaaaaattgaggaagagatc
agaaagcttgaagttgaattagatgcttcacttgaagatgaggacacaatagaacaacaa
tgttatgagatgttcaatgaatattcagagtcattgcaaaatcagccgctccctgagaaa
acagaggatcaaagagtaactgttaatgaagaaccggttgcttctgcctcaagtaaaaag
agaatagcgcaccaagcatctcaatcttatttacaaccaaatcctcaacctgttcctacc
ctggctaaaaagtgttctccatatcaggtcatgagagatagatgggaattactgaaaaag
gaaaaattgcagactcttgaagctaaaagagcctctttagcagttgctcctccattagtt
ccaaaagctgttgcacctacgccatattccttaactaatgctccacaagcatccttgcct
ggttcaggctcagtgtcaggtaaaaagagaattgctggtgtaccaaatgttgccatgctt
cttaaaccaccagccacatccacaagttcatcttctacttcaggaacttctccaaatcga
ttttataacaagacagctcagcgtgtcgatgaatttggacgcctcgttaaagttcgggtg
gctcatgcaccaaacatggacacaccggccatgagaaaaccagttgtcaatcccagtgac
tgccgtaaattcaaagtggcaacaagacaggctaatgtgaacaaacttttccaagcatat
attgatgctagatttggtgatgcatcgcatgatatggctttagagtcagaaagaaatagc
actcaaggaactgaaagcctgggggtgtacagccaccggatcattcagatactgaaagat
ctcagagcatgtgctgaaacatctcaaaatgggccaaaaatggacggtatgtctggaata
cccaatcgagttgtttctcacaatgccatgctcgctggaaagctgggagctaaagtgtca
tggagtattcaaactggaaagaaagaagatcaacccaaaccaaatttaagtttatatgaa
caacttcaaagttatgtcttaactaaagagaaattacaagaaaatggcttccccatgcct
tgtggagagaaaggatgtgcctccattaagccaagttcataccgaactgttactcagcca
tctgatcctagacagaaaatttgtgtgcgttgtcttaagccttatgcagtaaataaacga
ggggagcaagttaaagacgaggagtgctttttccactggggtagaaaatataaacgttat
cgtgaagtggaaacaaaatactcctgctgtgatagtgctgggagtggatgctcagtgtca
ccctaccatgtatttgaacaagattgggagaagtccaccggatacatgtccactatatcg
aaaccttggatggagtctgatccaggagtgtatgcccttgattgtgaaatgtgttatacc
actggagggttggaactcactagagttacagtcatcagagatgacttgactgttgcttat
gaaactcttgttaaaccaggtcataagatccttgattacaatacaaggtacagtggtatt
actgaagaagatctaaaagacgtaacaacaaatatattacaggtacaagcaacactccta
ggaatgttctgtgataaaacaattcttattggtcatagtttagaatccgacatgaaagca
ttaaagttaatacacccaactgtagtggatacaagtgtggtttttccacacaaaatggga
ccccctcaaaaaagagctcttcgaaatcttgctgcagattacttaaaaaaaattattcaa
aacgatgtgggtggtcatgacagtaaggaagatgctgtggctgcacttgagctcatgctg
tggaagctgaaagaggatgagaagacaagatag
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