Frankliniella occidentalis (western flower thrips): 113206432
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Entry
113206432 CDS
T07591
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113206432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113206432
Enzymes [BR:
foc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113206432
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113206432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
113206432
NCBI-ProteinID:
XP_026278308
UniProt:
A0A6J1SC92
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
MASSNNSLGVGRVFDPRKVTFTMFTSDDIRKMSTVTIRTPLTLNALGHPVPGGLYDSAMG
PMTDTSDPCKTCLKNIYGCPGHIGHIELPVPVTNPLFHKPVSVFMRLACLNCYRLQLPPA
IKWQIIAQIRLAEAGFMTEALEVENHCSIKEKKSLTAEVEDAMYKDMITSYIQTVTSRGN
SNIVPSDNKAAETVRNYNLNSLLRASCTEKKCMYCKGTLLKFILFRDRLNVRVDVAPKHQ
QNDESINPNSSINSNVSIADLSTAPGVKKARMQTLNPKEIRDHLRKLWANEKEFMGEVMP
VLKHHDIDHPIDIFFFDVIPVPPPNVRPVNFVRGVPCEHPQTGMYKKVVSDSVVLWNVIQ
LVQDASHSMTPEGKLLVQGVQGATPVEKLHFAWEELQSSADHLMDSEHGGVFDQRVQGLK
QVLEKKEGVIRMHMMGKRVNFAARSVITPDPNLNVDEIGFPEAFALKLYYPVPVTHWNVK
ELRQMVKNGPLVHPGAVMVEDEKGNISRLNENNPLQREAIAKRLLTPGDQSQIFNKGMKK
VYRHLINGDILLLNRQPTLHRPSIMAHKARILKGEKTLRMHYSNCKSYNADFDGDEMNAH
FPQSELARSEAYNLVNVCHQYLVPKDGTPLGGLIQDHMVSGVWLSIRGKFFSREDYCQLV
FQAIGDMAGNIKLLHPAIMKPMPLWSGKQVISTVLINTIPSGKPLINLTATAKIRANLWI
QETPRPWLAGGTPFGNSNNMSEAEVIIRQGELLSGVLDKTHYGATPYGLVHCMYELYGGQ
CSSRLLSSFAKLFMAFLQLMEGFTLGVEDILVVKKADKRRTEIIQECRKMGNTAAAAALG
LAPDTPPDVLTEKMEEAYCNPKRNFRGEIDSQFKSLLNPYTDDINKTCLPGGLLQKFPRN
NLQLMVQSGAKGSTVNTMQISGLLGQIELEGKRPPLMISGRSLPSFIPYDRQPRAGGFID
GRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLVKNLEGLSIQYDMTVRDSDG
SVVQFAYGEDGMDISKVQFLKPEQMSFLDDNHKVLHDTKLLSSLRDEDTSKDILKHKKKV
KKWKKVFGGRKTRRSTFLNYTVGMTDTFNVKKLSSKTGRKKGLAQLIDVFRETPLSDPEM
KPYVVNERAPDPVTSSYPAHSHLGAVTERLEEIIENYVKTRNKTSLSVDDSGFKDMLYLK
SMCSLAPAGDPVGLLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLKEILMTASKNI
STPSMEIPFRKDVSNLKVESESLKGKLTKITVADILEYVQVTESLVLSPVRAHQYIMRMQ
FLPFKFYKELFFTTPDAVLRHIEKYFLASLDFHIKKLIQASGRTTSIEDQVRKSAEKPKR
GKSKAPTQEEDDEDVDFSTAAKAGTGEGHESSDEEAQGDDDDATAASQRKKHQDSANYSD
ESDEESSDNDGKGFIHEEERNHQENEKNELMCLSKYTFIDEYYFDKKRKEWCVIKISISI
PSKKLNLSVLVQEVARLSAVSQVRGLKRAFLLNNPRDGLVLKTDGLNIIEMFKYSDLLDL
NKLYSNDIHAIADIYGIEAAVRVLVKEIQDVFKVYGITVDPRHLMLIADFMTFSGIFSPM
NRTGLDNNPSSLQKMSFEAPIGFLKKSLWLGKSDSLESPSSRICVGRPCRSGTGAFQLRH
QLN
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcaaacaacagcctgggggtcggaagagtgttcgaccctagaaaggttact
ttcaccatgtttacatcagatgatatacgcaagatgagtacggtgacaattaggacgccc
ctcacattaaacgctctgggacaccctgtgccgggtggtctctatgattcagccatgggt
cctatgacagacacaagtgatccatgtaaaacatgcttgaagaatatttatggatgccct
ggccatataggccacatagaacttcccgttccagtcactaatcctctattccacaagcct
gtttctgtatttatgaggctggcttgtttaaattgctatagacttcaacttccaccagcc
atcaagtggcaaattattgctcaaattcgtcttgccgaagctggatttatgacagaagca
ttagaagttgaaaaccattgctctattaaagagaagaagagtttgacggcagaggtagaa
gatgccatgtacaaggatatgatcacatcctacattcaaactgtcactagcagaggcaac
tcaaatattgtgcccagtgataacaaagctgcagaaacagtccgaaattataatttgaac
agcttgctcagagcctcttgcactgaaaagaagtgcatgtactgcaaaggtaccttatta
aaattcattttatttcgagatcgtctgaatgtgagagttgacgttgctcctaagcaccaa
cagaacgatgaaagcattaatcctaattcatctatcaactccaatgtatcaattgctgac
ttatccactgcaccaggagttaaaaaagccagaatgcaaactctcaacccaaaagaaatc
agagatcatcttcgtaagctatgggcaaatgagaaagaattcatgggagaagtaatgcca
gtactaaagcatcatgatattgaccatccaattgatatcttcttttttgacgtcatcccc
gtgccaccaccaaatgttcgcccagtaaattttgtcagaggtgtaccttgtgaacaccct
cagactggcatgtataagaaagttgtgtctgattcagtggttttatggaatgttatccaa
ttagtacaagatgcatcccattctatgacaccagaagggaagctccttgtgcaaggtgtt
cagggtgctacacctgttgaaaagctccattttgcatgggaagaacttcagtccagtgca
gatcacttaatggactcagaacatggtggtgtttttgatcaacgagttcaaggtttgaaa
caagtcttggaaaagaaggaaggtgttatccgtatgcatatgatgggaaagcgggttaac
tttgctgctcgatctgttataactcctgatcccaatctgaatgttgatgaaattgggttc
ccagaagcatttgctttgaaattgtactatcctgtcccagtcactcactggaatgttaaa
gagctacggcaaatggttaaaaatggacctctggttcatccaggtgctgtcatggtagag
gatgaaaaaggcaatattagcagattgaatgaaaataatccattgcagagagaggctatt
gctaaaagacttctcacaccaggagatcagtcccagatattcaataagggtatgaagaaa
gtttacagacaccttattaatggcgacattctattgctgaatcgacagcccactctacat
agacccagtataatggcccacaaagctcgaatccttaaaggtgagaagactttaagaatg
cactactccaactgtaagtcttataatgctgattttgatggtgatgaaatgaatgcccac
tttcctcaaagtgagctagcaagaagtgaagcttacaaccttgttaatgtctgccaccaa
tatcttgtaccaaaggatggcacaccccttggtggtttaatccaggatcacatggtttca
ggagtttggctttctattcgcggtaaattcttctctcgtgaagattactgtcagcttgtg
tttcaggcaattggtgacatggcaggcaatataaaacttctccatccggcaataatgaag
ccaatgccattgtggtctggtaaacaagttatttccacggtcctgatcaatactatacct
tctggcaagcctttgattaatttgactgctactgctaaaattcgggccaacttgtggata
caagaaactcctcgaccatggcttgctggtggcactccatttggtaattctaataatatg
tctgaagcggaagttatcatcagacagggagaactgttgagtggggttcttgacaagacc
cattatggtgccactccatatggtttagtgcactgtatgtatgaactctatggaggacaa
tgttccagccgattgcttagttcatttgctaaattattcatggcttttcttcagctaatg
gaaggatttactttgggggtagaagacattcttgttgtgaagaaggcagataaacgaaga
acagagattattcaagaatgccgtaaaatgggtaatactgcagctgctgccgccttaggt
ctagctccagacacaccacctgacgtcttgacggagaagatggaagaggcttactgcaat
cctaagaggaacttccgtggggaaattgacagtcaattcaaaagtttactgaacccctat
acagatgatataaataaaacatgtcttcctgggggacttctacaaaagttccccagaaat
aatttgcagctgatggtgcagtcaggagcaaaaggatcgactgtgaatactatgcagatt
tctggattgcttggccaaatagaattagagggaaagcgtcctcccttaatgatatcagga
cgctcactgccaagtttcatcccctacgatagacaacctagagctggagggtttattgat
gggcgttttatgacaggaattcaaccccaggagttcttctttcactgtatggcaggccgt
gagggcttaattgatacagctgtgaaaactagtcggagtggatacttacagaggtgcctt
gtaaagaatcttgaaggcttaagtatacaatatgatatgacagttcgagacagtgacgga
agtgttgtccaatttgcatatggagaagatggcatggatatttctaaagtgcagtttttg
aagcctgagcagatgtctttcttggatgataaccacaaggtgttacacgacacaaaactt
ttatcatcattaagagatgaagatacatctaaggacattctcaaacataagaaaaaagtg
aaaaagtggaaaaaggtgtttggtggtagaaaaactagaagaagtaccttcctaaactac
acagttggtatgacagacacatttaatgtcaagaagttatccagtaaaactgggaggaag
aaaggcttggctcaattgattgatgtttttcgagagacacccctttcagaccctgaaatg
aagccatatgttgtaaatgaaagggctccagatcctgtcactagctcatacccagcgcat
tcacacttaggagctgtgactgaacgtttggaagaaataattgaaaactatgttaagaca
agaaacaagaccagcctctctgtagatgattctggatttaaggatatgctgtatctgaag
tcaatgtgttctttagctcctgcaggagatccagttggcctcctggcagctcagtctgtt
ggtgaaccttccacacaaatgactttaaatacattccactttgcaggtcgtggtgaaatg
aatgtaactcttggtattccacgacttaaggaaatcctaatgacagcatcaaaaaatatc
agcactccatcaatggagataccattcagaaaagatgtgtcaaacttgaaagttgaatct
gaaagtttgaaaggcaaacttactaagattactgtagctgacattttggaatatgttcaa
gttactgaatctttagtgctttctccagttcgagcacatcagtatattatgagaatgcag
tttcttcctttcaaattttacaaggaattgttctttacaactccagatgccgttttgaga
cacattgagaaatatttcttagcaagtcttgattttcatatcaagaaattgatccaggcc
tctggaagaactacctcaattgaagatcaggtgagaaaatcagctgagaaacccaagaga
ggaaagagcaaagctcccactcaagaagaagatgatgaagatgttgatttttctacagct
gctaaagcaggaactggtgaaggtcacgaaagttcagatgaagaagcacaaggagatgat
gatgatgcaactgctgcatctcaaagaaaaaagcatcaagattctgctaattatagtgat
gaatcagacgaggagagttctgataatgatggaaagggctttatccatgaggaagagaga
aaccatcaagaaaatgaaaaaaatgaactcatgtgtctcagcaagtatacatttattgat
gagtattactttgataagaaaagaaaagaatggtgtgtcataaaaattagcatatctata
ccaagtaagaaattgaacctttctgtgcttgttcaagaggttgcacgtctttctgcagta
agtcaagtacgaggtcttaagagagcttttcttctcaataacccacgtgatggtcttgta
ctgaagacggatggtctgaacataattgaaatgtttaaatactcagatttgcttgacctc
aacaagctttactcaaatgatattcatgccattgcagacatttatggtattgaagcagca
gttagagtgcttgtaaaagaaattcaggatgtgttcaaggtatatggtatcactgtggat
ccacgccatttaatgttgattgctgattttatgacattcagtggaatattttcacctatg
aatcggacaggcctggacaacaacccatcttctttacagaaaatgtcctttgaagcccca
ataggtttcctgaagaaatcgttatggttaggcaagagtgattctcttgaatcaccatca
agtagaatatgtgttgggagaccttgtagaagcgggacaggtgctttccagcttcgtcac
caactcaattag
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integrated database retrieval system
