Frankliniella occidentalis (western flower thrips): 113206553
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Entry
113206553 CDS
T07591
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03013
Nucleocytoplasmic transport
foc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113206553
03015 mRNA surveillance pathway
113206553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113206553
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113206553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
GLTT
Motif
Other DBs
NCBI-GeneID:
113206553
NCBI-ProteinID:
XP_026278455
UniProt:
A0A6J1SGK1
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MSASEETVVADQQKEVDTSKDSEELSQCSNYDTPGKGSDADPDETAGENDHLSDYGEGDL
DGEGPNVQPLDSSDEERVPDDDDQLDDTVESDRESVTVDDEREEGDGQESSPSKEKKLDD
DEDRRNPQYIPKRGTFYEHDDRTADDMQETPSKESKIDSRDGKETGKESGRKVWKDREDR
WQHDLFQETDQAPKSREELLSVYGYDIRNEEAAPKARRRRRYGRGPNKYTRSWEDEEAYS
RPLSAFIVEKEAGENKKGPRKPRVLSRGGRGAGGGYRNSGNASGDGGDGNDVQKQEYPAL
SNSDDNGVKNGEESKVVSQPSFSSKVSGSVTSKTVAGTFNANPKEVVAPFGSQQKQQRGH
QQHASSNHQTSFRQEEDQRRGWRRDSNEDGDGAGGERGNIRGRGGRPSQARNRREDDREG
HRWSDHSQSNGQSRGRGGGRGGFRRGGPPPQGNQRQQREHDEENESDGGHRGYTEDVSRD
MGNLSISTTHPQSSSGGDYQRRPSNGNTNGTTDRRQSMPPRMQDNAGSRPKRYSSMRARN
VPETSPAQQPPVSAGYTPPTPHAYYQPGYGPAPVAGVPPGVPPGVAPMYQETPSMPAASP
GHQPAVAGPPVPTMPTTLPSTIPSTIQCFPQGLAPQGIPPQGLPPQGLPPQGLPPRGLPP
QGLPPQGLAQGSFIAPPPGPPAGLLPPGSFIPPVGGPAPSFVAATSPQGHVQGQYQQLAF
QPYQPIAMVSGVSQPQPAELYQPQGGITYYSTQNQIIPRAAPQPRVKAAIPILPPPERSS
YGGSMDEHGEIHEAVHEEIHSSSPPAEITVVSNDSNNPTS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcttcagaagaaactgttgtcgccgaccaacagaaagaggttgatacctcaaaa
gactcagaagagttgtcccagtgttcaaattatgacactccgggcaagggatccgatgca
gaccctgatgaaacagcgggcgaaaatgaccatctatctgactatggtgaaggagatctt
gatggtgagggcccaaatgtacaacccttggattcttcagatgaagaaagagttccagat
gacgatgaccaacttgatgacacagttgaaagtgaccgagaaagtgttactgttgatgat
gaaagggaggagggtgatggacaggaaagctctccatctaaggagaagaagctggatgat
gatgaagataggagaaatcctcagtacattcctaagcggggcacgttttacgaacatgac
gacagaactgctgatgacatgcaagaaacaccatctaaagaatccaagatagacagccgg
gatggtaaagaaactggtaaagagtctggtcgaaaagtgtggaaagatagggaagatcgg
tggcaacatgatctctttcaggaaacagatcaagcgcccaaatctcgtgaagagttatta
agtgtgtatggatatgacatccgaaatgaagaagctgctcctaaagccagaagacgacgc
agatatggccgaggtcctaataaatatactcgaagttgggaagatgaagaagcatacagt
agacccctgagtgcattcattgtagaaaaagaggcaggagaaaacaagaaagggccacgc
aagcccagagttctcagcagaggaggacggggggctggaggtggctatagaaacagtggc
aatgctagtggtgatggtggagatggcaatgatgttcagaaacaggaataccctgcgctc
tcaaattcagatgataatggggtgaagaatggtgaggaaagtaaggttgtttctcaacct
tcatttagcagcaaagtgtcaggaagtgtgacttcaaagactgttgctggcacatttaat
gctaatccaaaagaagttgttgcaccatttgggtcacagcagaagcagcaaagaggacat
caacagcatgcttcctcaaaccatcagacctcatttaggcaagaagaagatcaacgaaga
ggttggcgccgggactcaaatgaggatggggatggtgctggtggagaaagaggaaatatt
cgtggtagaggaggtagaccatctcaggcacggaacaggcgagaagatgacagagaaggg
cacagatggtctgaccattctcaatcaaatggtcaaagtagaggccgcggaggcggtagg
ggtggttttaggagaggagggcctcctcctcaaggaaatcaaaggcagcagagggagcat
gacgaggagaatgagagtgacggtggtcaccgtgggtacactgaagacgtcagtagagat
atgggcaatttaagtatttccacaacccacccacagtcttcttctggaggggattatcag
cgtcgcccgagtaatggaaacacgaatggtactacggacagaaggcaaagcatgcctcct
agaatgcaagataatgctggaagcagacctaagcgatactcgtctatgagagctcgcaat
gtgcctgaaactagtcctgctcaacagcctcctgtctcagcaggctacacacctccaact
ccccatgcctattaccaaccaggatatggacctgctccagttgctggtgtgcccccaggt
gtgcctccaggtgtagccccgatgtaccaggaaacaccttcaatgcctgctgcctcacca
gggcaccagcctgctgtggcaggcccgcctgtgccaaccatgcctaccactttgccaagt
accattcccagtacaatccagtgcttcccacagggtcttgctcctcagggtattccgccc
caaggtctcccacctcaaggtctcccacctcaaggtcttccacctcgtggtctcccacct
caaggcctcccacctcaaggcttagcccagggctctttcattgcgccacccccaggtccc
cctgccggccttctgcctcctggcagctttatcccaccagtgggcggacctgctccctct
tttgttgcggctacttcgcctcaaggccatgtccaaggacagtatcagcaattggctttc
cagccatatcagcctatagcaatggtgagtggcgttagccagcctcagcctgcagagttg
tatcaaccccaaggtggcataacatactactcaactcaaaaccaaattattcctcgagct
gctcctcagcctcgagtcaaagccgccatcccaatcttaccacctccagaacggtcatct
tacggaggatccatggacgaacatggtgaaattcatgaagcagtacatgaagaaattcat
tcttcatcccctccagctgaaattactgttgtctcaaatgacagtaataatccgacttct
taa
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