Frankliniella occidentalis (western flower thrips): 113206633
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Entry
113206633 CDS
T07591
Name
(RefSeq) ATP-dependent RNA helicase vasa
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
foc03036
]
113206633
Enzymes [BR:
foc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113206633
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113206633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113206633
NCBI-ProteinID:
XP_026278573
UniProt:
A0A6J1SD08
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MADEWDDSPAPSGGAGRGFSNGFGDDDAWSPGGGDGDFGGGRGGRGGRGGRGGFGRRDDD
GEGGGFRGGRGGRGGRGGGRGGRREDGEDGGGGFRGRRRDDDGDNGGFQDADGEGGENGE
GGEEKPKPVTYIPPEIDDPDEMFAMGISSGINFNKYDKIAVNVSGENAPPPVATFEAANL
RALLLENVKRSGYVKPTPVQKYALPIVMAGRDLMASAQTGSGKTGGFLLPILNKLLQEPV
DLVTDGDHTEPQAVIVSPTRELTNQIFTEAKKFASGSVIKVCVAYGGAAVRHQADKVRAG
CHVLVATPGRLMDFVNRGRITFSSIRFVVLDEADRMLDMGFLPEMEKMMKHETMVPKGER
QTLMFSATFPEEVQTLARQFLQDYIFLAVGPVGGANDDVTQTILEVDRNKKRDTLLEMLT
SGELDKTMIFVETKRNADFLAAFLSGKDLPTTSIHGDREQREREEALRDFTRGSMKILVA
TAVAARGLDIKGVAHVINYDMPKSVDEFVHRIGRTGRVGNTGRATSFYDAANDSAIAGDL
AKILRDANQEVPSFLEGFSAAGGFSAGTSDIRGGGGTTHVLEKEEEEW
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaatgggacgattcgcctgctccttctggaggtgctggacgaggattttcc
aatggatttggcgatgatgatgcctggagccctggcggtggcgatggcgactttggaggt
ggccgcggcggccgtgggggccgcgggggccgaggaggattcggacgccgtgacgatgat
ggagaaggaggcggcttccgaggaggacgtgggggccgcggaggacgcggtggtggccgg
gggggccgacgagaggacggcgaagatggaggcggcggcttccgaggacgccgtcgtgac
gatgacggcgacaacggaggattccaggacgccgatggggaaggtggtgaaaatggtgag
ggcggggaggagaagccaaagcctgttacttacataccaccagagattgatgatcccgac
gaaatgtttgcaatgggcatatcttctggtatcaacttcaacaagtacgacaagattgct
gtcaatgtttctggggaaaatgctcctccgcctgtagctacatttgaagcagccaatctt
agagccctcctgttggaaaatgtgaagaggagcgggtatgtgaaacccacccctgttcag
aaatatgctttaccaattgtaatggctggtagagatttaatggcatctgcacaaaccgga
tcaggaaaaactggagggttcttgctccctattctcaataagcttcttcaggagcctgtg
gatttagtaactgatggtgatcatacagaacctcaagctgtcattgtgagccctaccagg
gagcttacaaatcaaatatttacagaggccaagaaatttgctagtggttccgttattaaa
gtttgtgttgcgtatggaggagctgctgtaaggcatcaggctgacaaagttcgggctggt
tgccatgttttagttgccacaccaggcaggttaatggattttgtgaacagaggaaggata
acattttcctctatcagatttgtagtgctagatgaagctgacagaatgctggatatggga
ttccttcccgaaatggagaagatgatgaagcacgaaacaatggtccctaagggtgagagg
caaacacttatgttttcggccacattcccagaggaggtacaaactcttgcaaggcaattt
ctgcaagactacatatttttggctgtgggccctgttggtggggccaacgatgatgttact
caaaccattttggaagtggaccgcaacaaaaagagggatacattgctcgaaatgttgacc
agtggagagctggataaaaccatgatttttgtggaaaccaaaagaaatgcagattttctt
gctgctttcttgtcgggtaaagatttgcccactacatctatccatggtgatagagaacag
agagagcgcgaagaggctctaagagattttactcgaggctcaatgaaaatccttgtggca
acagctgtagctgcgagaggacttgatatcaaaggagttgctcatgtcatcaattatgac
atgcctaaatcagtggatgaatttgtccatagaatcggaaggacaggacgagtggggaat
actggcagggctacttcattttacgatgctgcaaatgactcagccattgctggtgattta
gccaaaattttgagagacgccaatcaggaagttccttctttcctagaaggattctctgct
gctggtggcttttccgcagggaccagtgacattcgtggtggtggtggaaccacacatgta
cttgagaaggaggaagaagagtggtag
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