KEGG   Frankliniella occidentalis (western flower thrips): 113206637
Entry
113206637         CDS       T07591                                 
Name
(RefSeq) protein lingerer isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
foc  Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:foc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:foc04121]
    113206637
   03400 DNA repair and recombination proteins [BR:foc03400]
    113206637
Ubiquitin system [BR:foc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    113206637
DNA repair and recombination proteins [BR:foc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     113206637
SSDB
Motif
Pfam: UBAP2-Lig GIP1_N UBA_4 UBA_RAD5A HBS1_N DUF3474
Other DBs
NCBI-GeneID: 113206637
NCBI-ProteinID: XP_026278581
UniProt: A0A6J1SD18
LinkDB
Position
Unknown
AA seq 1239 aa
MSSVGRAASRGSKGGKGDHASAKAQKTDTKTETAKTTENPKAQPTPEQMRIARIIGEDYE
DPQLRDKIKQVMDATHKSEEEVATALHDCDNDLNRAVNMLIEGQISGEWETSSKKKKNRL
PSANSKPDAAAPRGISSADVESENWDDETPIKPAAQTDSQQRTRTQRGGGGGSGGGGGPP
RMRGRGAQDNRGWRGRENKENERNLEESRNAVGPSAGGEREPRDSFRRGGGGGGNRGGRM
SNGAGRGGGRGGSRTGPRSFPNRGGHDRGGAPFPRATSWNPDEDGADSKSNNFPSPEDWY
NEEYTGSLSDTKVFTPSNVSGEASANDPITSLTVNNSNSDSSPGVNSTNLNYAQSAAGTG
NMSAVQSQYLRQLPDGKPPSSNALTGAMSGLNSMTGPLANSTDSKTASRGITPSTPSSGI
TYSTYAASAANSAANAPAATSYPSTYSSVSASVPSVSSAADTNFSTSSVNSSFTTYPSGQ
TQPASYTATATSYSTVYGSHQEGATQASNTQALPPRSKTQRPRVPPPSKIPQSAVEMPGD
GVNSIGVLDVQFGALDFGTEAFDTNSSEPQSSPQSQPSQPQNQASPMAKYSTGASAGGGM
DTTSTPASQPSMDIDPFKTAGQKAAALTQTLQETLLHGSQSQQSQSNSQSQSNDLKSQQS
NFTQQSRGPGVGVVVPSPLDSLVKSDQSSGGNVSNVSASGAGAAGSLSYSTPSSNYQSSY
TNQKSVGSGYQSTGYNASSYPPQATSGVSSNSSNSYPTSYPSNASNQAYQNVQSVYGASN
SNASATGGSNSGSVGSTSGYTTSGTAGGYQNSYGTSTASAASTNKLTSVLTAAKDLPQYD
TTATSTSNLSGSLTSSNTGAPGLSVPNVSGSVNNSPSLGLPGTTSLPNANNTTSTKVTNS
SAKSVVQNMPPGVQPIIAAGTQYIMSQGGLPYFQQPVYSFEEQQIMPLRIPHMPGYYDIS
YQQAPTSLATGREGSLANVPYSMSDARFARTDNASPVPSSLSQQNATQAHQQPMMNATGF
PPGYAAYAYYGGSVLPANYQYGTPTAMYPQVAPATNAHGNSNSTQYPKPGSYGSSYGSGY
DGLSASQDYSKGGGSYAGGHSGAQTANKAGVGTNVPSTGSSATDIYNKTHTHAALSKVNS
YDKGFHSGTPPPFNLAGNQNTGMAPSGAFPTAMYIPPPIPQQHHHSTTLMQHPVHQQMDM
RNTSRRSESGNNSGQRSQSSSQSSKPGSKQVFSQNYWAN
NT seq 3720 nt   +upstreamnt  +downstreamnt
atgagctcagttggtcgagccgcatcccgtggctctaaaggcgggaagggggatcatgct
tctgcaaaggcccagaaaacagacaccaagacagaaactgctaagacaacggagaatcca
aaggcacagcctacacctgaacagatgcgcattgcaaggatcataggtgaggattatgaa
gatcctcaactcagggacaagattaagcaggtgatggatgccacccacaaaagtgaagag
gaagttgccacagctttacatgattgtgataatgatctgaatagagctgtcaatatgctc
attgaggggcaaatttctggagagtgggagacatcctccaaaaagaaaaagaatcgtcta
cccagtgctaattcgaagccagatgctgctgctcctcgtggaatcagcagcgctgatgtt
gaaagtgagaactgggatgacgagactccaatcaaacctgctgcccaaactgattcacag
caacgcacacggactcagagagggggaggtggtggtagtggtggtggtggcggcccacct
agaatgcgcgggcggggcgcacaggacaacaggggctggagaggcagggaaaacaaggaa
aacgagaggaatttggaagagagccgtaacgctgtgggcccttctgctggaggtgagcgg
gagccgcgagattcattccgtcgaggaggtggaggaggtggcaacagaggtggtcgtatg
agcaatggggcaggtagaggaggtggcagaggagggagcaggacaggcccacggtcattc
cccaatcggggtggacacgaccgagggggtgctccatttcccagagcaacatcctggaat
cctgatgaagatggagcagactctaaatcaaacaatttcccttcccctgaagattggtac
aatgaggagtatacaggatctctctcggacactaaggtgttcactcccagcaatgtgagt
ggggaagcttctgcaaatgacccaattaccagccttacagtaaacaatagcaattcagat
tcctcacctggtgtcaattctacaaatctcaattatgcacagagtgcagctggaactgga
aacatgtcagcagtgcaatcacagtacctgaggcagttgcctgatggcaagccaccaagt
tctaatgctctgacaggagccatgagtggactgaattcaatgactggtccattggctaat
tccactgattccaagactgcatctcgtggcatcactccgtccacaccttccagtggcatt
acttacagcacctatgcagcaagtgctgcaaactcagctgctaatgcccctgctgctaca
agctaccccagcacttattcctctgttagtgcatctgtaccgtcagtatcatctgcggcg
gatactaacttcagtacatcatctgtcaactccagctttaccacttatccatcggggcaa
acccaacctgcctcatacacagcaactgcgacatcatacagcactgtgtatggatcgcat
caagagggagcaactcaggcttccaacacccaagcacttccaccaagaagcaagactcag
cggcctagagttccacctccctcaaagatcccacagagtgctgttgaaatgcctggagat
ggtgtcaacagtattggtgtgttggatgtccaatttggtgccttggactttggaactgag
gcctttgatacgaattcttcagagcctcagtcttcacctcagtcccaaccatcccagcct
caaaatcaagcttcacctatggctaaatattccactggggctagtgcaggtggtggcatg
gataccacttccacacctgcttctcaacccagcatggatattgaccctttcaaaacagct
ggtcaaaaggcagctgcattgacacagactttgcaggaaactctattacatgggtctcaa
tcgcagcagtctcagtcaaactctcagtctcaaagtaatgatctcaagtcccagcaaagc
aacttcactcaacagtcacgaggacctggtgtgggagttgtggttccctctcccctagat
agccttgtgaaaagtgatcaaagctcagggggaaatgtttctaatgtgagtgcaagtgga
gcaggagctgcaggatctctgtcgtactcgacacctagttccaactaccaatcaagttat
actaaccagaagagtgtaggaagtggataccaatcaactggatacaatgcctcaagctac
cctcctcaagcaacctctggggtttcctctaactcttcaaattcttaccctacaagctat
ccatcaaatgcttcaaaccaggcttaccagaatgtgcagtctgtttatggggcaagcaat
agcaatgcatcagcaacaggtggcagcaattctggatcagtaggctcaaccagtggttat
accacatcaggcactgctggtggctaccagaacagctatggcaccagtactgcctcagca
gccagcacaaacaagctcacctcagtactgactgctgccaaggaccttcctcagtatgac
acgactgccacttcaacgtcaaatctgagcggctctcttaccagcagcaacactggtgct
ccaggactttcggtgcccaatgtcagcggatctgtcaacaactctccatctcttggcttg
ccaggtacaacttctttgcctaatgccaataacactacttctaccaaagttacaaattcc
tctgcaaaaagtgttgtacaaaacatgccacctggggtgcaaccaatcattgcagcaggt
acgcagtacataatgagccaaggaggacttccgtatttccaacagcctgtgtatagcttt
gaagaacagcaaatcatgcctttgagaataccgcatatgcctgggtattatgatatcagc
tatcagcaagctccaaccagtttagctactggaagagaaggcagtctagctaatgttcca
tattcaatgtcagatgctaggtttgcacggactgataatgcttcaccagttccttcatct
ctttcacaacagaatgcaacccaggctcatcaacaacctatgatgaatgccactgggttc
ccaccaggctatgcagcttatgcatactatggtggatcagttctccctgcaaattaccag
tatggtactcccactgcaatgtaccctcaagtagcccctgcaactaatgcacatggcaac
tcaaactcaacgcagtaccccaagcctggaagttacggtagtagctacggctcgggctac
gatggcctgtctgcatcacaagactacagcaagggcggcggcagttatgctggtggtcat
tccggagcgcagactgccaacaaggccggtgtgggtaccaatgtcccatcaacagggtcg
tcagcaacagatatctacaataagactcacactcacgcggctctcagcaaggttaactcc
tatgataaaggttttcattctggcactccgcctcctttcaaccttgctggaaatcaaaat
actggtatggcacccagtggagcttttccaaccgctatgtatattccaccacctataccc
cagcaacatcatcactctaccactctaatgcaacatccagtgcatcaacagatggatatg
aggaatacttccagaagatctgaaagtggaaacaatagtggacagaggtcacagtcatct
tcacagtccagcaagcctggttcaaagcaagtcttctctcagaattattgggcaaattaa

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