Frankliniella occidentalis (western flower thrips): 113206856
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Entry
113206856 CDS
T07591
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03082
ATP-dependent chromatin remodeling
foc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113206856
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113206856
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
foc01009
]
113206856
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113206856
03036 Chromosome and associated proteins [BR:
foc03036
]
113206856
Protein phosphatases and associated proteins [BR:
foc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113206856
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113206856
SWI/SNF complex
113206856
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113206856
PBAF complex
113206856
SWI/SNF complex
113206856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
113206856
NCBI-ProteinID:
XP_026278905
UniProt:
A0A6J1SHU3
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MAIRTYGDKPLSFQIEENGEYYCIGSEVGNYLRLFRGSLYKKYPGMFRRAISNDERKKLL
ELGKSDPLFDRLSQHCLASSVSLLKASEVEDIIEGNDEKYKAISVHSEPPAPREPKPKKS
VPWVPSVPNSSHLDAVPQATPINRNRVNLKKVRTFPLCFDDTDPGAIQENASQMETLVPI
RLDMEIEGQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPVTFIPAIAQAIRGQVDSFP
SDGTIVEEAPDQRVIVKLNIHVGNTSLVDQVEWDMSEKDNNPETFAMKLCAELGLGGEFV
TAIAYSIRGQLTWHQRTYAFSEAPLPTVEVPFRPPSESDQWAPFLETLTDAEMEKKIRDQ
DRNTRRMRRLANTTPGW
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccgaacgtacggcgacaagccgttgagcttccaaatcgaagaaaatggcgaa
tactactgtattgggtcggaggtgggcaactacctccggctcttcagaggttcactctac
aagaagtatcctgggatgtttagaagagccatcagcaacgacgagcggaaaaagctactt
gagctaggcaagagcgaccctctatttgacaggttgagtcaacactgtctggcatccagc
gtatctctattgaaagcttccgaagttgaagacattatagaaggcaatgatgaaaagtac
aaagcaatttcagttcattcagaacctcctgctccaagagaaccaaagcctaagaagagt
gtaccttgggttccctctgtaccgaacagttcacatttggatgctgtgcctcaagcaaca
ccaataaatcgcaatagagtgaatcttaaaaaagtccggacattccccctttgttttgat
gatactgatcctggtgctattcaagaaaatgccagtcaaatggaaactcttgttccaatt
cgtttagacatggaaattgagggacagaagttacgtgacacctttacatggaataaaaat
gaaagtctcataactccagaacagtttgcagaggtactctgtgatgaccttgatttaaac
ccagttacattcattcctgctattgctcaggctattcgtgggcaagtggacagcttcccc
agtgatgggaccattgttgaggaagctccagaccaacgggtcattgtgaagttaaatatt
catgttggcaacacttccctagttgatcaggttgaatgggacatgagtgaaaaggacaac
aaccctgaaacttttgcaatgaagttgtgtgctgagctagggcttggtggggaatttgtc
actgctatagcttacagtattaggggacagctcacatggcaccaacgaacttacgcattc
agtgaagcacctttgccaacagttgaggttccattcaggccaccatctgaatcagaccaa
tgggctccatttttggagacactcactgatgctgagatggagaaaaagatccgggatcag
gacagaaatacaagacgaatgcggcgtcttgcaaatactactcccggatggtga
DBGET
integrated database retrieval system
