Frankliniella occidentalis (western flower thrips): 113206944
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Entry
113206944 CDS
T07591
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113206944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113206944
03041 Spliceosome [BR:
foc03041
]
113206944
03036 Chromosome and associated proteins [BR:
foc03036
]
113206944
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113206944
Spliceosome [BR:
foc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
113206944
Complex B
113206944
Complex C
U2 SnRNP specific factors
113206944
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
113206944
TFTC complex
113206944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
GtgE
Motif
Other DBs
NCBI-GeneID:
113206944
NCBI-ProteinID:
XP_026279022
UniProt:
A0A6J1SD97
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MHLYNLTLQRATGITHAVHGNFSGSKVQEIVVSRGKSLELLRPDPNTGKVHTLLTVEVFG
VIRSLMSFRLTGGSKDYIVVGSDSGRIVILEYLPQKNVFDKAHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAVEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPTGEAANKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPVASAMCVMKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRALRNLVMVDELDSLSPILACQVADLANEDT
PQLYMLCGRGPRSTLRVLRHGLEVSEMAKSELPGNPSAVWTVKRRADEEFDAYIIVSFVN
ATLVLSIGETVEEVTESGFLGITPTLSCSALGDDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMPSDVICMALANVPVGEQ
RSRFLAVGLSDNTVRIISLDPSDCLSPLSMQALPAAAESLCIVEMGGGDRETRDREEADT
GGVQGTLYLNIGLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRIRMQGSEAVLAMS
SRSWLSYYYQNRFHLTPLSYESLEYAAGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQ
VSFPVEYTPRKFIIHPESSHLVMVETEHNAYTEETKKQRRIQMAEEMQEAAGEEEQDLAR
EMAEAFLNEDLPESLFGAPKAGPGMWASLIRILNPVEGRTICRVPFEQNEAAHSIALVRF
SNHPDQQFIVVGVSRDLQLNPRQYSAGYLLTYSVDVDCTSMELVHKTVLDEVPQALCPFQ
GKLLVGVGKMLRLYDMGKKKLLRKCENKHIPNLIVNIQAMGNRIFASDVQESVYLVRYKR
QENQLIIFADDTHPRWVTTSTVLDYDTVALADKFGNISVVRLTSSISDDVDEDPTGNKAL
WDRGLLNGASQKADFVVNYHVGEVCMSLQKATLIPGGSESLVYTTVSGTVGVLVPFTSHE
DQDFFQHLEMHMRSENSPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSIDPTKQKSIAED
LDRTANEVSKKLEDIRTRYAF
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgtacaatttaactttacaacgagccactggcattactcatgctgttcatggc
aactttagtggcagcaaagttcaagaaattgttgtttctcgtggaaaatccctagagttg
ttgaggcctgatccaaacactggcaaagtacacactcttttgacagtagaagttttcggt
gttattaggtcacttatgtcatttagattgactggtggctcaaaagactatattgtggtg
ggttctgattcgggaagaattgttatcttagaatatctccctcaaaaaaatgtgtttgac
aaggcccatcaagaaacttttggtaaaagtggatgtaggcggattgttcctggacaatac
ttggcaattgatccgaaaggacgagctgtcatgataggtgctgttgaaaagcagaaattg
gtttacattcttaacagagatgctgaggctcgactcactatctcttctcctcttgaagct
cacaaaagtaacacattagtctatcacatggttggagttgatgtaggttttgaaaatcca
atgtttgcctgtctggaaattgattatgaggaagctgactcagatccaactggggaagca
gcaaataaaacacagcaaacactcacattctatgaacttgatttaggactgaatcacgtt
gtcagaaaatatagtgaacctctagaagagcatgccaactttctgatatctgttcctgga
ggcaatgacggccctagtggtgttctcatttgttctgagaactacttaacttacaagaat
ttgggtgaccagcatgacatccgatgccctattcctcgccgtcggaatgatttagatgac
ccggagagaggcatgatctttgtgtgttctgcaacacataagacaaagtctatgttcttc
tttcttgctcaaactgagcaaggtgatatattcaaaattaccttagaaacagatgaggat
gttgtcactgaaatcaaactgaaatattttgacactgtgcctgttgcttctgcaatgtgt
gtcatgaaaaccggttttcttttcgttgcttctgagttcggaaatcactatttgtaccaa
attgcacatctcggagatgatgatgatgaaccagagtttagctctgctatgcctctggaa
gaaggagacacctttttctttgctcctcgcgcccttcgtaatttggttatggttgatgag
ttggactcattatccccaattctagcttgccaagttgctgatttagctaatgaggatacc
cctcagttgtacatgttgtgtggcagaggtccacgctctaccctgagagttttacggcat
ggtctggaagtttctgaaatggccaagtctgaacttccaggaaaccccagtgctgtttgg
actgtgaagagaagagctgatgaggaatttgatgcttacattattgtatctttcgtcaat
gctacattggttctatctattggtgaaactgtggaggaagtgactgaatctggtttcctt
ggtatcactcctactctctcatgttctgcccttggagatgatgccctagttcaggtatac
cctgatggtattcgacatatacgagcagacaaaagagtgaatgagtggaaagccccagga
aagaaaactattgtgaaatgcgctgttaaccaaagacaagttgtgattgctttgaccggt
ggagaacttgtttactttgagatggatcctaccggtcaactcaatgaatatactgaacgt
aaggaaatgcccagtgatgtcatctgtatggcactagctaatgttcctgttggagagcag
cgttctcgttttctggcagttggtctctctgacaacactgttcgcataatttcattggac
ccatctgactgtctgtctcctctcagtatgcaagccttgcctgcagccgctgagtcactt
tgtattgtggaaatgggtggtggtgacagagaaacaagagatcgtgaggaagcagacacg
ggtggtgtgcaaggcaccttgtacctaaacattggtctccaaaatggtgtcttgcttcgg
acagtactagatccagttactggtgatcttgctgataccagaacccgttatcttggttct
agaccagtgaaactgttccgcattcggatgcaaggaagtgaagcggttcttgccatgtcc
agtcgctcatggctgagctattactatcaaaaccgtttccacttgactcccctctcatat
gagtcactagaatatgctgctggtttctcatcagagcagtgccctgagggcattgttgct
atatcaacaaacacattacgaattttagccctagaaaagttgggtgctgttttcaaccag
gtttcatttcctgtggagtacacaccaagaaagttcatcattcatcctgaatcgtctcac
cttgtcatggttgagactgaacacaatgcatacactgaagaaaccaaaaagcaacgcaga
attcaaatggcagaggaaatgcaagaagcggctggtgaggaggaacaagacctggctaga
gaaatggcagaggcatttttaaacgaagatcttcctgaaagtctgtttggtgctccaaaa
gctgggccaggcatgtgggcttctctcataagaatactgaaccccgttgagggaagaaca
atctgtagagtgccatttgaacaaaatgaagccgcacacagcattgcgctggtgagattt
tctaaccaccctgatcagcaatttattgttgtgggagtttccagagatctgcagctaaat
cccaggcaatattctgctggctatctccttacatacagtgttgatgttgactgcacaagt
atggaattagtccataaaactgttcttgacgaagttccacaagcactttgtccattccaa
ggaaaactactcgttggagttggtaaaatgctccggttgtatgacatgggaaaaaagaaa
ttactccgaaagtgtgaaaacaagcacattcctaatttaattgtgaatattcaagctatg
ggcaacagaatatttgcatcagatgttcaggagagtgtgtacttagtgcgctacaaaaga
caagaaaatcaacttataatttttgctgatgacactcatcctcgctgggtcacaaccagc
actgttttggattatgatactgttgccttggctgacaagttcggcaacatatctgtggtt
cgactaacgagtagtattagtgatgatgtggatgaagatcccacaggtaacaaggctttg
tgggacagaggactgctaaatggtgcttcacaaaaagcagactttgttgttaactaccac
gttggagaagtatgcatgtcgttacagaaagctacattaattcctggtggcagtgagtct
ctggtttacaccactgtatctggaactgttggtgtcctcgttcctttcacttcacatgaa
gatcaggacttcttccagcaccttgaaatgcacatgcgttctgaaaactcacctctctgt
gggcgagaccacctttccttccgatcgtattacttcccagttaagaatgtcattgatgga
gatctctgtgaacaatttaattctattgaccccaccaaacagaagagcatagcagaagat
ttagacagaacagctaatgaagtttccaaaaaactggaagacataaggacaagatatgct
ttctga
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integrated database retrieval system
