Frankliniella occidentalis (western flower thrips): 113207420
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Entry
113207420 CDS
T07591
Name
(RefSeq) protein cycle isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04711
Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04711 Circadian rhythm - fly
113207420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
foc03000
]
113207420
Transcription factors [BR:
foc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113207420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
bHLH_HIF1A
PAS_2
bHLH_NPAS4
bHLH_NCOA
bHLH_SAC51
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
113207420
NCBI-ProteinID:
XP_052129133
UniProt:
A0A9C6XS71
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MDQVLELPPQVDSAHSLSKKRKSSYHDGSDFDDDTEDGKSCRTDDKKQNHSEIEKRRRDK
MNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYTEGHYKPAFLSDQEL
KHLILQTAEGFLFVVGCDRGRILFVSESVSQVLNFSQGDLLGQSWFDILHPKDVAKVKEQ
LSASDLSPRERLIDAKTMLPVRTDMPAVGSRLCPGARRSFFCRMKRKLPVNVKEEADTTS
CSARRKKQHSAERKYSVIQCTGYLKSWAPEKMGLEESELVEGESGAGAGGACLSCLVAVG
RLQPMLSPPPRPRPGGRIPNTRPLQFTSRHAIDGKFLFVDQRATLALGFLPQELLGTSMY
EYYHPEDVHHLADSHKAALNSTEVVNTKVYWFRSKEGTYISIQSEWKAFKNPWTKDVEYI
IAKNSVIMTDGRHMDASASRHKVSGQARYQAGYDLFSQPGGRDGLQRDIQRIISWTHVEA
NKIGRKIADDALDSQRVRGNGDSSSNSTPSPSRPECSPVERKRSPSLAGDVGRPPGSGSE
SLASPQHEGKDIKALQLSVPFPGSPSSQVSPSLHGSGLQAAGGQGQGQDLDSLRDMRSQQ
SIGMSGGNADSADPSASIRNNVTLSSLAYPDQDCVCVLGMANDEDMMEMMPPVMPDSPGQ
GEGASNDGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPLP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggtcctggagctaccgccccaggtggactcagcgcacagcttgtcgaagaag
agaaagagctcataccatgacggcagcgactttgatgacgacacggaggatggcaagtcc
tgcaggaccgacgataagaagcagaatcacagtgagatcgaaaagcgtcgtcgtgacaag
atgaacacgtacatcacggagctgtccgccatggtgcccatgtgccacgccatgtcgcgc
aagctggacaagttgacggtgctgcgcatggccgtgcagcacctcaagaccatccgcggc
gccgtgcactcatacaccgagggccactacaagcccgccttcctctcggaccaggagctc
aaacatctcatccttcagacagctgaaggctttctctttgtagtgggatgtgaccgaggc
cggatcctgttcgtgtccgagtccgtgtcgcaggtgctcaacttctcccagggagacctc
cttggccagagctggttcgacatcctgcatccgaaggatgtcgccaaggtaaaggagcaa
ctgtccgcctctgacctcagccctcgcgagcggctcatcgatgccaaaaccatgcttccc
gtgcgcacggacatgccggccgtggggtcgcggctctgcccgggagcgcgtcgctccttc
ttctgccgcatgaagcgcaagctgcccgtcaacgtcaaggaggaggccgacactacctcg
tgttcggcgcggaggaagaagcagcacagtgccgagcgcaagtacagcgtgatccagtgc
acggggtacctcaagtcgtgggcgccggagaagatgggcctggaggagtccgagctggtg
gagggcgagagcggagcgggcgcgggcggcgcgtgcctgtcctgcctggtggccgtgggc
cgtctgcagcccatgctgtcgccgccaccgaggccgcggcccggaggccgcatccccaac
accaggccgctgcagttcacctcacggcacgccatcgacggcaagttcctcttcgtcgac
cagcgggcgacactcgctctcggcttcctcccgcaagagctcctgggcacgtccatgtac
gaatactaccacccggaggacgtgcaccacctcgccgactcgcacaaggcggccctcaac
agcaccgaggtggtcaacaccaaggtgtactggtttagaagtaaggaagggacctacatt
agtatacaaagcgaatggaaggcgtttaagaatccgtggaccaaagacgtagagtacatt
atagcgaaaaattctgtgatcatgacggacgggcggcacatggacgcgtcggcgtcccgg
cacaaagtcagcgggcaggcgcgctaccaggctggctacgacttgttctctcaacctggc
ggtcgggacggcctgcagcgagacatacaacgaatcatctcctggacgcacgtggaggcc
aacaagatcgggcggaagatcgcggacgatgcgctcgactcgcagagggtgcggggcaac
ggggactcgtcgtccaacagcacgccgtcgccctcccgaccggagtgcagtcccgtcgag
aggaagcggtcgcctagcctggccggtgacgtcggccggccgcctggctccggctcggag
tctctagccagcccccagcacgaggggaaggacatcaaggccctccagttgtcggtgccg
ttccccggcagcccctcgagtcaggtcagcccgtccctccacgggtcgggcctccaggca
gcgggcggccagggtcagggccaggacctcgacagcctgcgggacatgaggagccagcag
agcataggcatgagcggcggcaacgcggacagcgcggacccctcagcctccatacggaac
aacgtgacgctctccagcctcgcctaccccgaccaagactgtgtgtgtgttttaggaatg
gccaacgacgaggacatgatggagatgatgccgcccgtcatgccggactcccctggccag
ggcgagggcgcctccaacgatggcaacgacgaggctgccatggccgtcatcatgagcctc
ctggaggctgacgcggggctaggggggcccgtcgacttctctggccttccctggccccta
ccctaa
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integrated database retrieval system
