Frankliniella occidentalis (western flower thrips): 113207427
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Entry
113207427 CDS
T07591
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113207427
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113207427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
113207427
NCBI-ProteinID:
XP_026279781
UniProt:
A0A6J1SMN0
LinkDB
All DBs
Position
Unknown
AA seq
2869 aa
AA seq
DB search
MPPKHKERNTIRFLPFADRIANVNVDVIHRIGHRNEESTEDDIDSYFYQAIEKWNDMNCS
QGWSEFRSEVKDVQTLAQLVLLRDRVVASLLNHLDRKDPLTVQSLLDVVVALARDLRQDF
YPYYPDFLSKIVSYLNCKEAEVLEWSFHCLAYLFKFLWRCMVRNIGPVLSSLLPLLSSKR
QKYIHYFAADSFAFLARKVKDQTAFLKLILSHLEEQPEDAEGCGRLVFSWLKGIKNQLHS
CAQNVLLIIMQSLGNDCLSPDTLHNLFSHTLSHLVVEIHPGGLTYLWDAIQVTLKQFYSA
WKSGKTEASDAIVRVLKVIHQLSNHCEAVHVTSPNTLVDLILSIYASPSQLPEIVLSELS
AITAILLMSPSVRLPQDRTVKLSSKVLAKSPPHIILAFVKQVLSWSALDTLVLPRLLEIV
ASGFISGGDDGLGLQILAQLVHFKVPSLSQSYEHTPNNFLLDFTSASQSAGCDALDISSK
FLAVLDTHGKMNPDDYLESFNEKIYALLVLPHVRPLNETKIQNILQKLLLFLCQDIKNTT
SILESYNERNNERLKAEKLLSKLLLLFVVSLEAVIRMNGANKDLSSVFSVDLLLETLLPP
SQLGCSQLCALRALNLYLRHVELTNIKDSGSFSLSIYENLKLNLTSPFHSVREITCRVMC
QLPLAPELHSMFGLCLEAENTAATITEYRDKLQYFQKLSFEATQPSLIRHSSYKVAPLYF
ILGSLYVNFQLLWEPLQLLVTSYASGMTPADFWPVFHGHLTLATEQRDFTPLHNVAHEVD
YDSTLVNDLHSSLNSVDDKPDHAHYRLLLWQATHSFPEVCEKKNRDIASYFLTFMEEEYY
RSNAEVASVWDIKKHNNEDIPMDENCEHTEAKEEESGDDDERGENEEDHDDENEDSTDAT
KQRKKKKSDLDPETNSDEKPSVRLLTRTLLAHLGLLSKMRAPLVMYREPELNRVYHDLLS
HKNPDIQKAALECVLTYKHKYLVPYSQHLFSLIDNKSFKNEVTKFRIDKDSGIIQEEHRP
QLIPIVMKLVYSKMVAKTGMRTGGKAGPAMRRALVFRFLAGCHEEEMLIFVKMAFRFFDK
YLNENVALMVESIQSNIDLEKVIPPRRLQSVVNLLAVVQERFGGLMGNRLLSLTLQLLTC
VGATVDGILQKRDEIHAGFLNILRGLRTSCIDVLTQFFDRFEAYPWTACEIDTVLRVFVS
PLVDRLPIEGVHSPTALMKLFVVWSQHPRYFILFGTHAQNSMSTNPLSAIMKLLLGPKTN
QTVCGSIMEILENLLTLKDHKQIDENDMEVDETHLEERAPRIQVSHVLSLNESEINNLNL
SQAVNLGSKLLFPHIRSILERFRIRLAANIKRGSGLNQQELLVLSYVSEFVRAPDTSATL
AQLILPILTRRISTPHEDEENVLKMMNTLNHLVKNVKDPHIYIRPIAALFSCVNGVAGRK
MLISLINTIAEATASLYKNLKEEMECLALVASNLNAYDKRWVEQPNFDTRLDAFKTIQTL
LDEGKLSVDLGVIVIHHCFYVIRSDKDMSLRDSASHCLRRVAPMLSLQFSSDEAACKFLV
DTTILSLIRNSINKDSSENLHSEGVLLLGVMARECGMLHPVLRDLNLLTNKLDVEVDFFE
NLEHLQLHRKTRAILKFCEVFLSLEKPPTTRTLTQFILPLVSQFISSEKYASKNSLVDAA
VKAISVVSRLLPWHQYEALLRYYLGRLRMSSLFQKQLVRIVMNILDAFHFDLSKAQVKKM
VDGQAPSSSQAVSVAKEKANDTSDFLSSDEGKLNGIEENGDHSVIADLEEEMDVEENKDD
EVEMETEENEPQQIKFAVERQIVLCPSAATRVIQTITHGLLPQLHRALIARTLIESVHKV
NKKQIRSTYHDRDAEEEEVVRVPMALAVVKLLQRLPKEMLVKNLPGVLIKLCTFLKSRLD
SVRRVTRETLQKVMISLGPSFLSTLLREMTALLTRGFEVHVLVFSIHSVLIALKEVFAAG
DIDESLPYIIEVCKLDLFGAAAEEKEEGKVASKLHEAKSIKSYNTLHVTAQFVSESHLTN
LLIPFKEIIQSAHSHKIVNKASECLRQIVSGLSENALVSASGLLIFAVGVASECIPALSL
KQRKHEKTLKQKEIEARRRPDCFIIKEAPKQRTGITSSDAARVAARMNAHLFVEFGLRLI
YFLLKHEKLKESGEDVRPLIDPVIPLFKSCLSSEHVKLSIISLQCLSWLLRIDLPSLRDN
IADITSSIFGLLHKFAAAGLSKGDNFDLVVAAFKAVAVLVRDVKYHTLSQEQLKALLLYA
EQDLSDANKHATAFALLKAILSRKLVVPEIHDVMDKVATLSITSDLPHVRVQARVVFHQF
LMDYPLGKKLEGHLSFYLSQLNYELQPGRESALEMVNSVITSFPVHVLSNHSGLFFLMLG
ARLVNDDAPECRKMVAQCINKMLGRLSKNDRDRLFNISLLWLRDKQVSHRRLAAQLCGIF
VVCEKETFRSHLSDLLPAVIAQFSYNATEEVNHEPGKFVRAPSKSFETPTIKSRHTEDLN
SEEICNETKKNISETEKMRDHHVYQTLQLVIKICNYCPSWLSDSEFSDHVYNLTEHTQAL
LAHPHEWVRLSAAQILTHILNSLDMESLANSVNEDSTTAVKTQDKSKLGFFVENATSKLR
SMILDHCAQFTPGVEVGQLLLLQVVKNLVIFADILKNTAGEEVVSGSSASNGTEMNERQK
PLSLMWLVKRMRRVVNMEVVHAPKSTAMRTMVLNWTAAVVVKLGADCIRPVLHHLLAPIV
REQSSDEPVPEGSPVANLRTLAKEVGSLIKKTVGHEYFIRTQTRLQTQITSVRAERKIKR
KHEAVAEPEKAAKRKIQKQARKKESNKRRQLKLRGKKFKGKREVSLEDD
NT seq
8610 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaacataaagaaaggaacaccattcggtttcttcctttcgctgaccgtatt
gcgaatgtgaacgtcgacgtcatccatcgaattggacacagaaatgaagaatctacagaa
gatgatattgactcatatttttaccaagctatagaaaaatggaatgatatgaactgttca
caaggatggagtgaatttcgttctgaagttaaagatgtacaaactctagcacaacttgtg
ctcctgcgtgatcgagttgttgcttcattattaaatcatctagacagaaaagatcctttg
acagtacagtcattgcttgatgtggttgttgctttggcaagagatctgagacaagatttc
tatccatattatccagacttcctctctaaaattgtgtcatacctcaattgtaaggaagct
gaagtgttagaatggtccttccattgtctagcttatctcttcaaatttttgtggcgttgt
atggttcggaatattggacctgtgctctcaagtttacttccacttttatcttctaaacgt
cagaaatacattcattattttgccgctgacagctttgcatttttggcccgcaaggtgaaa
gatcaaactgctttcttaaaactgatattatctcatttagaagaacagcctgaggatgcc
gaaggttgtggacgacttgtattctcatggctcaagggaatcaaaaaccagcttcatagt
tgtgctcaaaatgttcttctcattatcatgcagtccttgggaaatgattgcttgtctcct
gatactcttcataatctattttctcatacattgtctcaccttgttgtagaaattcaccct
ggtgggttgacatatttgtgggatgcaatacaggtaacgttgaagcaattctattctgca
tggaaatctggaaagactgaggcttctgatgccattgtcagggtcttgaaagtgattcac
cagttgagtaatcactgtgaagcagtccatgtgacgtctcccaacacattggtcgatctc
atattgtccatctatgctagcccatcccaattacccgaaattgttctttctgaactatca
gcaataacagctattttacttatgtcaccatcagtccgtttaccacaagaccgtactgtc
aaattaagctccaaggtccttgctaaatcaccaccccacatcattctggcttttgtcaaa
caagtcttgagctggagtgctcttgacacacttgttctgccacgtcttttggaaattgtt
gcttccggtttcatctctggtggtgatgatggcctaggtcttcaaattctagctcaactt
gtccattttaaagtaccctcactaagtcagagttatgaacatactccaaacaacttcctc
cttgattttacctcagcatcacaaagtgctggttgtgatgcactagacatctctagcaag
ttcttggctgtacttgatactcatgggaaaatgaacccagatgactacctggaatctttt
aatgaaaagatatacgccttacttgtcttacctcatgtgagacctcttaatgaaacaaaa
atccagaatattttacagaaactcttgctatttttatgccaagacattaaaaacacaaca
tcaattctggaaagttataatgagagaaacaatgagagactaaaagctgaaaaactactc
tcaaagttgttacttttatttgttgtttctcttgaagctgtcatcagaatgaatggtgca
aacaaagatctctcctcagttttttcagttgacttattgctggaaacattgcttccacca
tctcaacttggttgcagccaactatgtgcacttcgtgctttaaatctctacctacgtcat
gtagaactgacaaacattaaggattctggaagtttctctctctctatttatgagaatctg
aaattgaatctgacctcacccttccattcggttcgagagattacttgccgtgttatgtgc
cagctgcctttagcaccagagcttcactctatgtttggtttatgcctggaagctgaaaac
acagcagctacaattactgaatacagagacaaacttcaatattttcaaaagctttcattt
gaggccactcaaccatctctcattagacattctagctacaaagtggcacccctttatttt
attttgggttcactctatgtgaactttcaactactatgggaacccctccaactccttgtg
acctcatatgcttcaggcatgacacctgctgacttttggccagtctttcatgggcatttg
acactagctacagaacagcgtgattttacaccgttgcataatgttgcacatgaagttgat
tatgactctacattagtcaatgatttacactcctctctaaattcagttgatgacaaacct
gatcatgctcattatagacttctgctctggcaggctacccatagttttcctgaagtttgt
gagaaaaaaaatcgtgacattgctagttattttttgacatttatggaagaggaatactat
cgatctaatgctgaggtggcttctgtgtgggacattaagaagcacaataatgaagatatt
cccatggatgaaaattgtgaacatactgaagctaaagaagaagagagtggtgatgacgat
gaaagaggagagaatgaagaagatcatgatgatgaaaatgaagatagtactgatgcaaca
aaacagagaaaaaagaagaaatcagatttagacccagaaacaaattctgatgagaaaccc
tctgtccgtttgttaactaggactcttcttgcacatctggggctcttatcaaaaatgcgg
gctcctctcgtaatgtacagagaacctgagttgaacagagtatatcatgatttgctttcc
cataaaaacccagatatacagaaagcagctctagagtgtgttttaacatacaaacacaaa
tatcttgtcccatattctcaacatttgttttctctgattgataataaatcttttaaaaat
gaagttactaaatttagaatagacaaagattctggtattattcaggaagaacatagacct
caacttatacctatcgttatgaaattggtgtacagtaaaatggtggcaaagactggaatg
agaactggaggaaaggctggtccagcaatgagacgtgctcttgtatttagattcctagct
ggttgccatgaggaagaaatgttaatttttgtgaaaatggcgttccgattctttgacaaa
tatttgaatgaaaatgtggctctaatggttgaatcaattcagtctaatattgacctggaa
aaagttatacctcctcgtcgactccaaagtgtagtaaatctactggctgttgttcaagaa
aggtttggaggtttaatgggtaatcgtttgttgtctttaacactacaactactcacttgt
gttggagcaacagttgatggaattctccaaaagagggatgagattcatgctggtttcctt
aatattctgcgtggtctccgcacatcttgtatcgacgtgcttactcaattcttcgaccgg
tttgaggcatatccatggactgcctgtgaaatagacacagtcctgcgagtgtttgtttct
ccacttgttgaccgtcttcctattgaaggggtacacagtccaactgcgttaatgaagcta
tttgttgtttggagtcagcatccgagatattttattttgtttggaactcatgcacaaaat
tcaatgagcacaaatccactgtcagccattatgaagttattacttggacctaaaacaaac
caaacagtttgtggatctataatggaaatacttgaaaacttgttgactctgaaagaccat
aaacaaatagatgaaaatgacatggaagtggatgagactcatttggaagaaagagcaccc
cgcattcaagtttcccatgtcttgtcactgaatgaaagtgaaatcaataacttgaactta
tcacaagcagtgaacctaggaagcaaacttctgttcccccacataagaagtatactcgaa
agatttaggatacgacttgctgcaaatatcaagcgtggatctggcctgaaccaacaggag
ctgttggtactctcttacgtgtctgagtttgttagagcaccagacacgagtgctaccttg
gcacagctcattctccctatattgacaaggcgaatatctactcctcatgaagatgaggaa
aatgtgctgaaaatgatgaatactctcaatcatttggtgaagaatgtgaaggaccctcat
atatacatacggccaatagccgccttgttcagctgtgtcaatggtgtagcaggtcgaaaa
atgctcatatctttaatcaacactattgctgaggctactgcctctctgtataagaattta
aaagaggaaatggagtgtttagcacttgttgccagcaatctgaacgcatatgacaaacgt
tgggtggaacagcctaactttgatactagacttgatgccttcaaaacaattcagacattg
ttagatgaaggcaaactctctgttgatttgggggttattgttattcatcactgcttttat
gtcattcgttcggataaggacatgtcgctgcgtgactctgcttcacattgtctgcgacgc
gttgctcccatgctcagtcttcagttcagcagtgatgaagccgcctgtaaatttcttgtt
gatacaactattttatcccttattcgaaactctattaacaaagatagttcagagaaccta
cattctgagggtgtactgcttcttggagtaatggcaagggagtgtggtatgttacatcct
gttcttagagatctaaaccttctcactaataaattggatgttgaagtagatttctttgag
aatcttgaacatttacaactccacagaaaaactcgtgcaatactaaagttttgtgaagta
tttctgtcattagagaaaccacctactacaaggactttaactcagttcatcctacccttg
gtttctcagttcattagctcagagaaatatgctagcaaaaacagcttggttgatgctgct
gtgaaagccattagtgtagtttctcgattactaccatggcaccagtatgaagctcttctc
cgatattatttaggccgacttagaatgagttctttgttccaaaagcaacttgttcgaatt
gtcatgaatattttagatgctttccactttgatctatccaaagcacaagtgaaaaaaatg
gtagatggtcaagctccatctagttctcaagctgtcagtgtagccaaagaaaaggcaaac
gatacaagtgattttctatcctctgatgaaggcaaacttaatggaattgaagaaaatggt
gaccatagtgtgatcgctgatctagaagaagaaatggatgttgaagaaaacaaagatgat
gaagttgaaatggaaactgaggaaaatgaaccccaacaaattaaatttgctgttgagaga
cagatagttttatgcccctctgctgcaacccgtgtgattcaaacaattacacatggtctt
cttcctcagttgcatagagcacttattgccagaactctcattgaaagtgttcacaaggtc
aacaagaagcaaataagaagtacataccatgaccgagatgcagaggaggaagaagttgtc
agagtaccaatggcattagcagttgtaaaacttctgcaacggctacccaaggaaatgctt
gttaaaaatttaccgggggttttgataaagctgtgcacatttttgaaatcacgtcttgac
tctgtgcgacgtgtaacaagagagaccctacaaaaagtgatgatttccttgggtccctct
tttttaagtacacttctccgagaaatgacagctcttctcacaagaggatttgaagttcat
gtactggtgttctctattcattcagttttaatagcactcaaagaggtttttgcagcaggt
gacattgatgaaagccttccatatatcattgaagtttgcaagcttgatttgtttggtgct
gctgcagaagaaaaggaagaaggcaaggtagcgtccaaactccatgaagcaaagagtatc
aaaagctataatactcttcatgtaacagctcagtttgttagtgaaagtcatcttaccaat
ttattaattcctttcaaagaaattattcaatcagcccactcccacaagatagtaaacaaa
gcaagtgaatgtttacgtcaaattgtgtcaggcctttcagagaatgcactggtgtctgca
tctggccttcttatatttgctgttggtgttgccagtgaatgtattcctgctttatcactt
aagcagcggaagcatgagaaaactcttaagcagaaagaaattgaagctcgccgccgtcca
gactgttttattattaaggaagctccaaagcaacgcactggtattaccagctccgatgct
gctagagtagctgcacgaatgaatgctcacttatttgtagagtttggtttaagattgatt
tactttctcctgaagcacgaaaaactaaaggagagtggagaagatgtacggccacttatt
gatccagtgataccactttttaagtcatgtttatcatctgaacacgtcaaattgagcatc
atctcactccaatgtcttagttggctgttgcgcattgacctgcctagcttaagagataat
atagccgatataacttcctcaatatttggtttactgcataaatttgctgctgctggattg
agtaaaggggacaattttgatcttgttgtagctgcatttaaagctgttgctgtccttgtt
agagatgtaaaataccacactctaagccaagaacagttgaaagccttgttgctgtatgct
gaacaagatttatccgacgcaaataagcatgccacagcatttgctctcttgaaggcaatc
ctctcaagaaaattggttgtccctgaaattcatgatgttatggataaagttgcaactttg
agcatcacgtctgatcttcctcatgtgagagttcaagccagagtagttttccaccaattt
ctgatggactatcctcttggtaaaaagctagagggacatctctctttttatttgtcacag
ttgaactacgaacttcaacctggtcgagagtcagctttggagatggtgaactcggtgata
acttctttccctgttcatgttctatcaaatcattctggactgtttttccttatgctggga
gccaggcttgtaaatgatgatgctccagagtgtcgtaaaatggtggcacagtgtatcaac
aaaatgcttggacgtttaagtaagaatgatcgtgatcgtttgtttaacataagccttctg
tggctcagggataagcaagtatcccatcgtcgacttgctgctcaactctgcggtatattt
gttgtttgtgaaaaagaaacatttagaagtcatttgtctgatcttctacctgctgtcatt
gcacagttttcttacaatgcaactgaagaggtcaatcatgaaccaggaaaatttgtcaga
gcaccaagcaagtcttttgaaactccaaccatcaaatcaagacacacagaagatctcaac
agtgaagaaatttgtaatgagaccaagaagaatatatctgaaactgaaaagatgagagat
catcatgtttatcaaacattgcaactagttatcaaaatatgtaattattgcccttcatgg
ctttctgactcagagttcagtgaccatgtgtataatttaactgaacatacacaggccttg
ttggcacatcctcatgagtgggtaagattatcagcagctcaaattcttacccacatctta
aattctcttgacatggagtcacttgctaattctgtcaatgaagacagtaccacagctgtg
aaaactcaagataaatcaaagttaggattctttgtagaaaatgcaacctcaaaacttcga
tcaatgattctggatcactgtgctcaatttactccaggtgtagaagttgggcaactgttg
ctgttgcaagttgttaaaaatcttgttatatttgctgacattttaaaaaatacagctgga
gaggaagtggtttcaggttcaagtgcctcaaatggaactgaaatgaatgagagacaaaaa
ccactctcattaatgtggcttgtgaaaagaatgagaagggttgtcaatatggaagttgtt
catgctccaaagtcaactgctatgcgaaccatggttttaaactggactgctgctgtagtt
gtaaaattaggtgcagattgtataaggcctgtgctgcaccatctgcttgctcccattgtt
cgcgaacaatccagtgacgagcctgtccctgaaggaagtcctgtagcaaatttacgaact
cttgccaaagaagtaggcagtctaattaaaaagacagttggtcatgagtactttattaga
actcagacccggttacagactcagatcacatcagtccgtgcagaacgcaagattaaacgc
aaacatgaggcggtggctgaaccagaaaaagcagcaaaacgaaagattcaaaagcaggca
aggaaaaaagaatcgaacaaacggcgtcaattgaagctgcgaggtaagaaattcaaaggc
aaaagagaggtttctcttgaagatgactaa
DBGET
integrated database retrieval system
