Frankliniella occidentalis (western flower thrips): 113207952
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Entry
113207952 CDS
T07591
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113207952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
foc03036
]
113207952
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
113207952
REST complex
113207952
Heterochromatin formation proteins
Other heterochromatin formation proteins
113207952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
113207952
NCBI-ProteinID:
XP_026280513
UniProt:
A0A6J1SH26
LinkDB
All DBs
Position
Unknown
AA seq
1677 aa
AA seq
DB search
MKRRVEEAAKQEGSSSSSVSTGLSGRTSGPPGGPAIVYSGPVRQHHNRGITPPGLNTVSS
PSYLPASSINKNLSTLSSDRTVGSSAPSEVPMPAFSIAPSYSSTMPGATAIKTAVSGLQG
GTPAGPGLQTTLHTLQAPPQVLTQQQHVIQTHQPIRHKVHTGATTPPAVAAPPQQPSQQS
QQQFQKLKVEDALSYLDQVKFKFGNQPQVYNDFLDIMKEFKSQSIDTPGVIARVSDLFKG
HPELIVGFNTFLPPGYKIEVQQNDQGFAFQVSVSIPSPTASTTTVVHTPGGPITTSTHGH
TTLITPIGPPGSGASSNNIVVTPLLPPSTSVVTQGVPSVGVPTSTPPLQSGQPVSIGKPV
TIISSSGPLVSHHPTPMVATSNHNNPSVTSGPTAVPVLLSNSSAANPVSVSAGTTPHHAS
APVHHAYPQPSVVPTAPPPGSTVPHGVNSVSSTSGAQTSIPSHHNTHPTHAPHHLTTAGT
NLHHAGMAQAVSQAHQAVSQGLPHGETIPHSTQSQPVEFNHAINYVNKIKNRFQGQPDKY
KRFLEILHTYQKEQRNLKEGSTMSGNSGGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFL
PDATSHQSVIGTKVLTNDHHAVKKPTNLKLTYNSNSCSTSRERDGTTPTSGLVMMGTHAD
RVHSNINSASKFGNSGGVKRSPSFSSPTPNSSHHGHHQHIHSGSHGSHGASHGAHGTQSH
GPPPPKKHKACIRDVTLADAGKFGTLNDYAFFDNVRKALRSQEVYTNFLRCLQLFNEEVV
SKTELVQLVTPFLGKYPELFRRFKDFIGACEGNVNAPGVHGLVGGLGGSLGGNSLGVESI
PNNVARQDRPSGEHALEIDYSTCKRLGASYCALPKNYTQPKCTGRTTLCKEVLNDTWVSF
PTWSEDSTFVTSRKTQYEEYIYRCEDERFELDVVIETNAATIRVLEGVHKKLQRLSPEEV
AKFRLDDCLGGASPTIHQRALKRIYGDKAADIIDGLKKNPSVAVPVVLRRLKAKEEEWRE
AQKGFNKLWREQNEKYYLKSLDHQGINFKQNDVKQLRSKSLFNEIETLFDERHEQAEEGS
SETTTGPHLVLPYKDKTVLNDAAELLIHHVKRQTSIHKEDKQRIKQLLRHFLPDLFFHPR
QELSDDERDDAENDEDSDANASKTTPGADRRDGSNGAQDKKDEESEGDVKPPPHAVSQHP
DECYSLFFGNNNWYLFYRLHHILCERLTRMYDRAVALANEEAKYRVDRKESTAIALRLKP
KNEIDVEDYYPAFLDMVRNVLDGNMDSNAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQ
HLVSDDPCTECQEIFLSEQKRGGTAIGGPCSTAHLRTAAEVAYQRRAEQTLAEENCFKVL
IYKRDCKVTIELLDTESEEQEQQTSSEPSKWTNFVDRERRFSNSEETNNAETGNRVKEER
DVDGVLLRQRKAVFLARNVRRKKLGQTDVENEIKGIGPVAVPVPVSEGNDASESEKALID
RKKKEKLSSDGDEEMEVDEDVEASGGRRQSKQGKPKPVRLNHKLNIESDNLDGADELQCH
FNQNSYRMVYVINRDNYLYREQALPKARQSHPSVSTRLNNKFRSWHNQWAREHVSDSQQK
SNSDWLMGRGEGVVPNRTRVLTNNDISKPPYRIFNRYRVDRLVSESASSAAVPTAES
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcgagtggaggaggctgcaaagcaagagggtagcagcagtagtagtgttagt
actgggctgagtggaaggacaagcggcccacctggcgggccggccattgtttacagtgga
ccggttcgccaacatcataatcgtggcataactccgccaggcctcaacacggtttcctca
ccgagttatctccctgcatcaagtattaataaaaatttgtccacgttatcctcggatcgt
acagtgggctcttcagcaccaagtgaggtgcccatgccagcgttttctatagcccccagc
tactcttcaacaatgccaggcgctacagcaattaaaactgcagtcagtgggctgcaaggt
ggcacacctgctggccctggtttgcagacaactcttcataccctgcaagcacccccgcag
gttttgacacaacagcaacatgtcatccaaacacaccagcctattaggcacaaggtgcat
actggagcgaccactccccctgcagttgctgcaccccctcagcaaccatcccagcaatct
cagcaacagttccaaaagctgaaagtggaggatgcactgtcctacttggaccaggtcaag
tttaaatttggaaaccaaccacaggtgtacaatgattttttggatatcatgaaggagttt
aaatcacaaagcattgatacgcctggagttatagcaagggtgtcagatcttttcaagggc
caccctgaacttattgttggtttcaacacatttttgcccccggggtacaaaattgaagtt
cagcaaaatgaccagggatttgctttccaagtgtccgtcagcattcccagtcccactgcc
tccaccacaacagtggttcatactcctggtggtcctatcaccacaagcacacatggtcac
accaccctcatcactccaattgggcctccaggctcaggtgcaagtagcaacaacattgtg
gttacccccttgttaccaccatccacctctgttgtcactcaaggtgtgccttctgttggt
gttccaacaagcactcctcctcttcagtctggtcagcctgtttctattggcaaaccagtc
accattatcagctcaagtggaccactggtcagtcatcatccaactcccatggttgctacc
agtaaccacaacaacccaagtgtgacatcagggccgacagcagtgcctgtcctccttagc
aattcttcagctgctaaccctgtgtcagtgtctgctggtactacaccccaccatgcatcc
gcaccagtccatcatgcttatccccaaccatcagtggtaccaactgcaccacctccaggc
agcactgtgccacatggtgtgaacagtgtgtcttccactagcggagctcaaacttcaata
ccaagtcaccacaatactcatccaactcatgcaccacaccaccttacaacagcagggaca
aatctgcatcatgcaggcatggctcaggctgtttcacaggcccatcaggctgtgtcgcag
ggtctgcctcatggtgaaacgattccccattcgacccagagtcaaccagtggagttcaat
catgccataaactatgtgaacaaaattaagaaccgcttccaaggtcaacctgacaagtac
aaacgctttttggaaattttgcacacatatcagaaagagcaaaggaatttgaaagaaggt
tctactatgagtggtaacagtggtggtgctaaacatctcactgaagcagaggtgtattct
caagtggctaaactttttgaaaatcaggaggatttgctagcagagtttgggcagttcttg
cctgatgctacaagccatcaaagtgtaattggaaccaaggttctcactaacgatcatcat
gctgttaagaaaccaactaatttgaagctgacctataacagcaactcctgttcaacaagt
agggagcgtgatggtacaactcctacttcaggtcttgtcatgatgggcactcacgcggat
cgcgtccacagtaatataaattcggcttcaaagtttggaaacagtggtggtgtgaagagg
tcaccttctttctcatctccgacccccaattcgtctcaccatggtcatcatcagcatatt
cacagtggaagtcacggtagtcatggtgcctctcatggagcacatggaactcagtcacat
ggtccaccaccccctaaaaagcacaaagcctgcattagagatgttactcttgcagatgct
gggaaattcggtaccttaaatgattatgctttctttgacaatgttagaaaagctctccga
agccaagaagtttacaccaatttccttcgttgcttacaattatttaatgaagaggttgtc
tcaaaaactgagctagttcagcttgtaactccatttcttgggaagtaccccgaactgttc
agaagattcaaagatttcattggagcctgtgaaggaaatgtcaatgcaccaggtgtgcat
ggtttggttggcgggcttggaggcagccttggtggaaattctttaggggttgaaagtatc
cccaacaatgttgcacggcaggatagaccgtctggagaacatgcactggaaattgactat
tcaacttgcaagagacttggtgccagctattgtgctctaccgaaaaattatacccaaccc
aaatgcactggcagaacaacactgtgtaaggaagttctcaatgacacatgggtgtccttc
cctacttggtctgaagactctacttttgtgacatcccgcaaaacacaatatgaagaatac
atttatcgatgtgaagatgaaagatttgaattggatgttgtcattgagacaaatgcagca
accattcgagttcttgaaggggtgcataaaaaattacagaggctctcacctgaagaagtt
gccaagtttagattagatgactgccttggaggagcttctcccacaattcatcagagagca
ctgaaaagaatatatggagacaaggctgctgacattattgatggcctgaagaaaaatcca
tctgtagctgtgcctgtcgttttaagaaggttaaaggctaaagaagaggagtggagagaa
gcccagaagggtttcaacaagctgtggagggagcaaaatgaaaagtactacttgaaatca
ttagaccaccagggtattaatttcaaacaaaatgatgttaagcaacttcgttctaagagt
ttattcaatgaaatagaaacattatttgatgaacgtcacgagcaggctgaagaagggagc
agtgaaacaacaactggtcctcacctagtgcttccatataaggataaaacagtcttaaat
gatgctgcagagctacttattcaccatgttaagaggcagacaagtatacacaaagaggac
aaacaaagaataaagcaactgttgcgtcatttcctacctgatttattcttccatcctcga
caagagctgagtgatgatgagagagatgatgctgagaatgatgaagacagtgatgccaat
gcgtccaagactacacctggtgctgaccgaagagatgggtctaatggagctcaagataag
aaggacgaagagagcgaaggagatgtgaaacccccgcctcatgcagtatcacagcatcct
gatgaatgctactccctcttctttggtaataacaactggtacttgttctaccggttgcac
cacatcctttgtgagcgccttactcgtatgtatgatcgagcggttgctttagctaatgaa
gaggcaaaatatagagttgacaggaaggagtcaacagcaattgccctgagattaaagccc
aaaaatgaaattgatgttgaagattattacccagcattcctggatatggttcgcaatgtg
ttagatggtaatatggatagcaatgcttatgaagacacacttcgagaaatgtttggaata
catgcatatatagcatttactttagacaaggttgtcacctatgctgtgagacagttacaa
catctggtatcagatgatccatgcactgagtgtcaagaaattttcttatcggagcaaaaa
agaggaggtactgccattggtggaccctgtagtactgctcatctgagaacagcagcagag
gtagcttatcaaagaagagctgaacaaacacttgccgaagaaaactgctttaaagtttta
atttataagcgagactgcaaggttaccattgagcttcttgataccgagtcagaagaacag
gaacagcagacttcatccgagccgtctaagtggacaaacttcgtagatagggaacgccgc
ttttcaaattctgaagaaactaacaatgctgaaactgggaacagagtaaaagaagaaaga
gatgttgatggtgtgctccttagacaacgcaaggcagtattccttgctcgtaatgtcaga
agaaagaagcttggtcaaactgatgtagaaaacgaaataaagggaattggtcctgtagct
gtacctgtacccgtatccgaggggaatgatgcttctgaatcagaaaaggcattaattgat
cggaaaaagaaagagaagttaagttctgatggtgatgaagaaatggaggttgatgaagat
gttgaagcaagtggtgggagaagacagtcaaagcagggaaagcccaagcctgtacgcctc
aaccataagttaaacattgagagtgataatttggatggagcagatgaattacagtgtcac
ttcaatcagaactcataccgtatggtttatgtgataaatagagataactacttgtaccgg
gagcaggctcttcccaaagcaagacagtctcatccatctgtgtctacaaggctgaataac
aagttccggtcatggcacaaccagtgggccagagaacatgtcagtgattcccaacagaaa
tcaaacagtgattggttgatggggcggggtgaaggtgttgtgccaaataggacacgagtt
ttaaccaacaatgacatcagcaagcctccttatagaattttcaacagatatagggtggat
aggctagttagtgaaagtgcttcatcagctgctgttcctactgctgagtcatga
DBGET
integrated database retrieval system
