Frankliniella occidentalis (western flower thrips): 113208155
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Entry
113208155 CDS
T07591
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04120
Ubiquitin mediated proteolysis
foc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113208155
04120 Ubiquitin mediated proteolysis
113208155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
foc04121
]
113208155
Enzymes [BR:
foc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113208155
Ubiquitin system [BR:
foc04121
]
Ubiquitin ligases (E3)
U-box type E3
113208155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
113208155
NCBI-ProteinID:
XP_026280818
UniProt:
A0A6J1SJA3
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MSELSQEEIRQKRLARLAALDTSSNASPSSSPGGVPTSPPSVAPSSSQLGPPLPGHNGAQ
QFSTTPGSSQNSSGNYSTSTPVLNTQKSDSSVSDTSLQMEVDCEKTSLSQVDVDSGFENM
EVDDSDSKKDITQRQRTVSSSAEVTEDIVLSTISRVLCVSWTDRTEATVFLPHTADAIKE
ARQEDPAMPVNVQDLISQVLMEVLDQFTTGENPLTYDRPESPVPMSSKEQPAERKEPSAL
HIVQTKASNGLNYLLDCYARVAVEERNQPKRSSTPPLKEVLADIRAQCVQLSSLLLQGIA
MEIVPQLPTPLLSPILNQSLPRGFLPELFSRTYTNDAVFSNIMTPVLRGLFVGMQSASIF
GNAHRVPIQALCDLLEIRCGPSGNIRPLCNLLTQQVNFLPEPVTQALGRELARTSFLGAF
MQVSVFAEDDPKVAEKFFSGNTSSDKTLNQTLQLELDTTRVCIQRVLLHIRIALAKLFHT
VLLNPSCREPMMNWLAAMVKHNERRAQLQTEESALAGDGFMLNLLSVLQLLAVKIKLEKV
DPLYAFHPATVVDISNATRLKFSSQDVTNWMGSLDASDIHTWQEPKFPTQCWFLTLHCHH
LALLPTCSKYQLRLRTLRELHKLVEEMTQTEAQWKDLPYAARNKDLIRRWKQQIKKLNRS
KACADTALLDEALIRRAMVFYTSVAEFLMGALTGWTAGGPPPSIPIPQEIPPLFAALPEW
YVEDIAEFLLFALQFSPAVAADAMEDSLICWLLVVVCAPHCIRNPYLVAKIVEVLFVVNP
GIQSRTETLHSRVMSHPIAIAHLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISIILKGM
WDSPIHMQAIKNESRSGKQFVKFINMLMNDTTFLLDESLESLKRIHEVQELMSDTTTWSQ
LSSQQQQTRQRQLSADERQCRSYLTLARETVDMFHYLTAGIQEPFLRPELVDRLSAMLNF
NLQQLCGPKCKNLKVRNPEKYGWEPRKVLSQLVDIYLHLDHNDFACALAADERSFRKELF
EDAAVRMERARIKTADDIKRFIALAERAHEISVQNMKREVDFNDAPEEFRDPLMDTLMED
PVQLPSGKVMDRPVIMRHLLNSSTDPFNRQPLSEDMLMPATELKERITLWKQEKMKTLS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagctgagccaggaggagatacgccaaaagcgcttggctcgattggcagctctt
gatacctcaagtaatgcctctccaagctcttccccaggaggagtacccacctctccacca
tctgtagcaccttcttccagtcaacttggacctccattgccaggtcataatggagctcaa
cagttttctacaactccaggatcttctcaaaattccagtggcaattacagtacttctaca
ccagttctcaatactcagaaaagtgattcatctgttagtgatacctcgcttcaaatggaa
gtggactgtgagaaaacaagtttatctcaagtagatgtggattctggattcgagaatatg
gaagtggatgattctgacagcaagaaggacatcactcaaagacaacgaactgtcagctcc
agtgctgaagtcacagaagacatagttctttccaccatctctagagtactctgtgtgtct
tggactgatcgtacagaagccactgttttcttgccacacactgctgatgccattaaagaa
gccaggcaagaagatcctgctatgccagttaatgttcaggatcttattagtcaagttctt
atggaggttttggatcagttcacaactggtgagaatccgctcacttatgaccgccctgaa
tcccctgtcccaatgtccagtaaagaacagccagctgagagaaaagaaccatcagcactt
cacattgttcagacaaaagccagtaatggtttaaattaccttttagattgctatgcaaga
gttgctgtggaggaaaggaatcagcctaagcggagcagcacaccacccttaaaggaagtt
cttgcagacataagagcacaatgtgttcagttgtcttctctgctcctccaaggcatagct
atggaaattgtgcctcaactaccaactccactcttatctcctattttgaatcaatctctt
ccacgaggattcttacctgaactgttttctcggacatacacgaatgatgcagtgttttcc
aatataatgactcctgttttaagaggtttgtttgtaggcatgcaatctgcctcaattttt
ggtaacgcccacagagtacctattcaagctctatgtgatctccttgaaatacgttgtggt
ccttctggcaatatcaggcctctctgcaatttactcactcagcaggttaacttcctgcca
gaacctgtcactcaagctctgggaagagaattagctagaacatccttccttggtgctttc
atgcaagtttcagtctttgctgaagatgacccaaaagtggcagagaagtttttctcggga
aacacaagctcagacaaaacattgaatcagactttacaactagagctggacaccacaagg
gtttgtattcagagagtattgttgcacataaggatagctttggcaaaattatttcataca
gtccttttaaacccaagctgtcgagaaccaatgatgaactggcttgcagcaatggttaaa
cataatgaaagaagggctcaacttcaaactgaggaaagtgcattagcgggtgatggcttt
atgctcaatttgctctctgtcctccagctcctagctgttaagattaaattagaaaaagtt
gatcctctgtatgcttttcatcctgccactgttgttgacatatcaaatgctactagatta
aaattcagcagtcaggatgttactaattggatgggaagtctagatgcttctgatatccat
acttggcaagaacctaaatttccaactcagtgttggtttttgactttacattgccaccat
ttagctcttctaccaacttgtagcaaatatcaactaagattacgaactctgcgtgaactc
cataaactggttgaagaaatgacacaaacagaggctcagtggaaagaccttccttatgct
gcgcggaacaaagatttaattcgccgctggaagcaacagattaagaaactaaaccgaagc
aaggcttgtgctgacacagcccttttggatgaagctcttattcgccgtgccatggtgttt
tatacttcagtggctgaatttttaatgggtgctctcactggatggacagcaggcgggcca
ccaccaagtataccaatacctcaagaaattccacctctttttgccgccttacctgagtgg
tatgtggaagacattgctgaatttttgttgtttgcactgcaattttcccctgcagtcgct
gctgacgctatggaagactcattgatctgttggcttctggtggttgtttgtgcacctcat
tgcattcgcaacccttacctggtggccaaaatagttgaggttctgtttgtagtaaatcct
ggtatacaatctcgaactgaaactttacattctcgtgtcatgtctcatcccattgctatt
gcacatctaccctcttacctgatgaaattttatactgatgttgaaacaactggatctagc
tctgaattttatgacaaatttaccattcgttaccacattagtatcattttaaagggtatg
tgggacagtccaattcatatgcaagctatcaagaatgaatctcgctctggcaaacagttt
gttaaatttattaacatgcttatgaatgatacaactttcctgcttgatgaaagccttgaa
tctttaaagcggattcatgaagtacaggaacttatgtcggataccactacatggagccaa
ctttcaagtcagcaacaacaaaccagacaaagacagctttctgctgatgaacggcaatgc
agatcatacttgacccttgcccgtgagactgttgacatgttccactacctgactgctggc
atacaagaacccttcctgaggcctgaactggtagatagattgtcagccatgcttaatttc
aatcttcaacaactttgtggtcccaagtgtaaaaatctgaaagttcgtaatcccgagaaa
tatggttgggaaccacgcaaagtcctaagccagctggtagatatttatctccaccttgat
cacaatgattttgcttgtgctcttgcagcagatgagcgctcattccgcaaggaattattt
gaagatgcagctgttagaatggaacgtgctcgcatcaaaactgcagatgatattaagaga
tttattgcccttgctgaacgcgctcatgagatttctgtccagaatatgaaacgagaagta
gacttcaatgatgcaccagaggaatttagagatcctctaatggacactttaatggaagat
cctgttcaactgccctctgggaaagtaatggaccgacctgtcatcatgcgccatttatta
aattcctctactgacccctttaaccgtcaaccactctcagaggatatgttgatgccagca
actgagctcaaggaaagaattaccttatggaagcaagaaaaaatgaaaacactctcataa
DBGET
integrated database retrieval system
