Frankliniella occidentalis (western flower thrips): 113208411
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Entry
113208411 CDS
T07591
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113208411
Enzymes [BR:
foc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113208411
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
Pre-60S particles
Helicases
113208411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
113208411
NCBI-ProteinID:
XP_026281159
UniProt:
A0A6J1SIT5
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MDTTKGTVDEVEGFSFPDEDGDDEKDFPVPKKTTQKGGGFQCLGLSFEVLKGIKKRGYKV
PTPIQRKTIPLVMSGRDVVAMARTGSGKTACFLIPLFEKLKIRSAKSGARALILSPTREL
AVQTLKFIRDLGRFTGLKSVVVLGGDSMENQFSAMHGNPDIIVATPGRFLHLCVEMDLKL
DSVQYVVFDEADRLFEMGFGEQMNDILARLPDSRQTLLFSATLPKLLVEFARAGLSDPVL
LRLDVESKLPELLKLVFVNCRPEDKDAALLVLLKQVIGWDVQCAIFVATKHHVEYVSMLL
HNSGISNTCVYSNLDPSARKINVAKFASRKVQALIVTDVAARGIDIPYLDNVINYNFPAK
AKLFIHRVGRCARAGRSGTAYSLVSTEELPYFLDLHLFLGRGIKEAKHTVHIKKEKQENE
TNNESDDVEDGVFGRIPQSLLEEELANLEILLRQFSDMESQKRVCKNAYSRYIQTRTGAS
TESVRRLKEIDFSDLGPHPVFKKVHAPLLEADKQAILGLMRQYRPKGTVFELGGNPISPM
YLAMKAKRDFHQTNIEKYQSKVEERLKMQDKGLSEPSKNLPSSTQDEIDDAFRTVINPAK
RRIYDAEVIRAKKMKKYQVDKEHYVPYTAPDKYSEEGLTVNFYKEASSAALDLTGDTEEM
MRNKKRQMKWDRKKKKMVQVNPDKKVSMIKTESGQWIPSTYKSGRYKEWQEKNKIQEQTN
DASEGEEEENEAERNTKPLNAHPNTHWGRHNQKVERKKRDVQLTSKDQILKKRLQREKEQ
KRIKMKQSKKGKKKRK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaccaaagggacagtggatgaagtggaagggttttcatttcctgatgaagat
ggagatgatgagaaggattttccagtgcccaaaaagactactcagaaaggtggtggattt
cagtgccttggacttagttttgaagtgctgaagggcattaaaaagaggggatacaaagtc
cccactcctattcaaagaaagacgattcccttggtaatgagtggtcgagatgttgttgcc
atggctcgaactggaagtggaaaaactgcttgttttctgatacctctttttgagaaatta
aagatccgatctgctaaatctggagcaagagctttaattctctcccccaccagagaactg
gcagttcagacactaaaatttattcgagatttgggcagatttactggcttgaaatctgta
gttgtcctaggaggtgactctatggaaaatcaattcagtgccatgcatggtaatcctgat
attatagttgctacccctggacgatttctacatttatgtgttgaaatggacttgaagttg
gattcagttcagtatgttgtatttgatgaggctgataggctctttgaaatgggctttggt
gaacagatgaatgacattttagccaggttacctgacagtagacagacacttctgttttct
gctacccttcctaaacttttagttgagtttgcaagggctggtctaagcgatcctgtgtta
ctacggttggacgtggaatcaaaattgccagagctcttaaaactagtatttgtgaactgc
agacctgaagacaaagatgctgcactcttagtgctactcaagcaagttattggttgggat
gtgcaatgtgccatttttgttgctacaaaacatcatgttgagtatgtcagcatgctttta
cacaactctggaatttccaatacttgtgtgtattcaaacttggatccctctgcaagaaag
atcaatgttgcaaaatttgccagcagaaaagtacaggctctaattgttactgatgttgct
gctcgaggtattgacattccctatctggataacgtaattaactacaattttcctgcaaaa
gctaaactcttcatccacagagttggaagatgtgctcgtgccggccgtagtggtactgcc
tattcactggtgtccacagaagaactaccatactttctagatctacatttattcttaggt
agaggtataaaggaagcaaagcacacagttcacatcaaaaaggaaaaacaggaaaatgaa
acaaataatgagagtgatgatgtagaggatggagtttttggtcgaatacctcaatctcta
cttgaagaagagctagcaaatcttgaaatacttcttcgtcagttttctgatatggaaagt
caaaaacgggtttgtaaaaatgcctactctcgttacatccaaacacgaacaggggcgtca
actgaaagtgtacgccgactgaaagaaattgattttagtgatttaggtcctcatccagtt
ttcaagaaagttcatgcaccacttttggaagcagataagcaagctatcctaggattgatg
agacaatatcggcctaaggggactgtttttgaactgggtggcaaccctatttcaccaatg
tatctagctatgaaagcaaaaagagactttcaccaaacaaacatagaaaaatatcaatcg
aaagttgaggaacgcttgaagatgcaagacaaaggtttatcagaaccaagtaaaaatttg
cctagcagcacccaggatgaaattgatgatgctttccgaactgtcataaatcctgccaaa
agaagaatctatgatgcagaagtcataagagctaagaagatgaagaagtaccaggtggac
aaagaacattatgttccatatacagctccagataaatactctgaagaagggcttacagtc
aatttctacaaggaggctagttctgcagcattagacctgacaggtgatactgaagaaatg
atgcgtaacaaaaagcgtcaaatgaagtgggaccgtaagaaaaagaagatggtgcaagtg
aatccggataagaaggtttcaatgataaaaacagaatcaggtcagtggattccatcaact
tacaagagtgggcgttacaaagagtggcaagaaaagaataagatacaagaacagacaaat
gatgcaagtgagggtgaggaggaagagaatgaagcagaaaggaatactaaacctcttaat
gcacatcccaacacacattggggcaggcacaaccaaaaggttgagcgtaagaagcgtgat
gttcagcttacatctaaggaccaaattttgaagaagagacttcaacgggaaaaagagcag
aagcgtataaaaatgaaacaatcaaagaagggcaagaaaaagaggaagtaa
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