KEGG   Frankliniella occidentalis (western flower thrips): 113208718
Entry
113208718         CDS       T07591                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113208718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:foc03400]
    113208718
Enzymes [BR:foc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     113208718
DNA repair and recombination proteins [BR:foc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     113208718
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT BRCT_2 RNA_ligase DUF3802 FMP23
Other DBs
NCBI-GeneID: 113208718
NCBI-ProteinID: XP_026281642
UniProt: A0A6J1SL29
LinkDB
Position
Unknown
AA seq 921 aa
MSSEELPGPVAPPDRLFAADRPKNGRAKCKRCKEPVEAGKLRIAKIVPNAFSASGGWAKQ
WFHPACLWEAFSKQRPSTKKIEDPEGDIEGWEDLIQEDMDEIVAYLRSTGANPPSPRATR
KEGDATPKAKKPRAKKEVKEAKPVTPPPPPPPSKDDYFRAFRKLCVDLSAEPSYLAKTAL
VTKVFTEGTDGGGFKGDLEVWTRLLLPMVEKRIYNLQSKQLVKLFSKIFETDEDAMLEDL
TQGDVAETIKIFFDQSKSFKPTGKSNILIAEVDEFLEKLATMTREEEQSYHLKQVAKKCT
SNDLKMIIRLVKHDLRINAGPKHILAAIHPDAYAAFQTSRDLRAVVRKALLDKGQPSSAS
SSGASASGASGSGSFSISISLLTPVLPMLAEACKSVEQAMKKCPNGMYSEIKYDGERVQV
HKQGDEFKYYSRALKPVLAHKVNHFKQYIPDAFPSGEDLILDSEILLIDNKTGKPLPFGS
LGVHKQSAFQDANVCLFVFDCMFYNGESLLHKTMKQRRKILEKVMVEIPNRILFSEQKEI
HRPEDLTAMMEKVFRLGLEGLVLKDLQGPYEPGKRHWLKVKKDYLFGGAMADTADLVVLG
AFYGTGQKGGMMSIFLMGCYDPATRRWCTVTKVHGGHDDETLARLQTELKMVKIHKDPGK
IPDWLKANKQMYPDFVAVDPKDTQVWEITGAEFTQTEVHTADGISVRFPRVTRIRDDKTW
EQATSLPELRALFKKSKETADFSLSAMAGASGSMSSSSASPSKTTSPRKASPQKTSPRKT
TTKEAQKRPRSDSNSPERAKKSGPSKPLPDVFLGITMRAPPFMDRDSEFNLRRYIVAYGG
NLIARHSKELAVFTLHSSDETFSGVSDEGLDVDVEWVWDCIRKGELLPAQRYTTYGYRGG
YKGYRGRTPDSDESNGLMDFY
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgtcgtcggaggagctgccggggccggtcgcgcccccggaccgcctgttcgcggccgac
cggcccaagaacgggcgcgccaagtgcaagcgttgcaaggagccggtggaggcgggcaag
ctgcgcatcgccaagatcgtgcccaacgccttcagcgcctcgggcggctgggccaagcag
tggttccacccggcctgcctgtgggaggccttctccaagcagcggcccagcaccaagaag
atcgaggacccggagggcgacatcgagggctgggaggacctcatccaggaggacatggac
gagatcgtcgcctacctcaggagcacgggcgccaacccgccgtcgccgcgggcgacgcgc
aaggagggcgacgctaccccgaaagcgaagaagccgcgggccaagaaggaggtcaaggag
gcaaagccggtgaccccgccgccgccaccgccgccgagcaaggacgactacttcagggcc
ttccgcaaactctgcgtcgacctgagcgcagagcccagctacctcgccaagacggcgctc
gtcaccaaagtgttcaccgaggggaccgacggcggtggcttcaagggcgacctggaggtg
tggacgcgcctgctgctgcccatggtggaaaagcgcatctacaacctgcagagcaagcag
ctcgtcaagctcttcagcaagatcttcgaaacggacgaagacgccatgctggaggacctg
acgcagggcgacgtcgccgagaccatcaagatcttcttcgaccagtcaaagtcgttcaag
ccgaccggcaagagcaacatcctgatcgccgaggtggacgagtttctcgagaagctggcg
actatgactcgcgaggaggagcagtcctaccacctcaagcaggtggccaagaagtgtacg
tcaaacgacctgaagatgatcatccgcctcgtgaaacacgacctccggatcaacgcgggg
cccaagcacatcctggccgccatccacccggacgcgtacgcggccttccagacctcccgg
gacctccgcgccgtggtgcggaaggccttgctcgacaaggggcagccgtcgtcggcgtcg
tcgtcgggcgcctccgcctccggcgcctcgggctcgggctccttcagcatctccatcagc
ctcttgacgcccgtcctgcccatgctggccgaggcgtgcaagtcggtggagcaggccatg
aagaagtgccccaacggcatgtactccgagatcaagtacgacggcgagcgcgtgcaggtg
cacaagcaaggcgacgagttcaagtactactcgcgagcgctcaagcccgtgctcgcgcac
aaggtgaaccacttcaagcagtacatccctgacgcgttccccagtggcgaggacctgatc
ctggacagcgagatcctcctcatcgacaacaagacgggcaagccccttcccttcggctca
cttggggtgcacaagcaatccgcttttcaagacgcgaatgtttgccttttcgtcttcgac
tgtatgttttacaacggggagtccctcttgcacaagaccatgaagcagaggcgaaaaatc
ctggaaaaagtgatggtggagataccgaatcgaatcttgttttcagagcagaaagaaatc
caccgccccgaggacttgacggccatgatggagaaggtgttccgcctggggctggaggga
ctggtgctcaaggacctgcagggcccgtacgagccgggcaagcgccactggctcaaggtg
aagaaggactacctcttcggcggcgccatggccgacacggccgacctggtggtgctcgga
gcgttctacggcacgggccagaagggcggcatgatgtccatcttcctcatgggctgctac
gacccggcgacgcgccgctggtgcaccgtgaccaaggtccacggcggccacgacgacgag
acgctggcgcggctgcagacggagctcaagatggtcaagatacacaaggacccgggcaag
atcccggactggctcaaggccaacaagcagatgtacccggacttcgtggccgtcgacccc
aaggacacgcaggtgtgggagatcacgggcgccgagttcacgcagaccgaggtgcacacg
gcggacggcatctcggtgcgcttccctcgcgtcacgcgcatccgcgacgacaagacctgg
gagcaggccacctcgctgccggagctcagggcactgttcaagaagtctaaggagacggcc
gacttctccctttccgcgatggcaggtgccagcggtagcatgagtagcagtagcgcgtcg
ccgtccaagaccacgtcgccgaggaaggcctcgccgcaaaagacgtcgccgaggaagaca
acgacgaaggaggcgcagaagcggccgcggtcggactcgaactcaccggaaagggcaaag
aagtcggggccttccaagccgctgcccgacgtgttcctggggatcaccatgagggcaccg
cccttcatggatcgtgactccgagttcaatctacggagatacatcgtcgcgtacggcggc
aatctcatcgcgcgtcactcgaaagagttggccgtgttcaccctccattcgtctgacgag
actttctccggcgtgagcgacgagggcctcgacgtggacgtcgagtgggtgtgggactgc
atccggaagggggagctcctgcccgcgcagcgctacaccacctacggctaccgcgggggc
tacaagggctaccggggccggaccccggactcggacgagtccaacgggctcatggacttc
tactga

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