Frankliniella occidentalis (western flower thrips): 113208867
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Entry
113208867 CDS
T07591
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04140
Autophagy - animal
foc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113208867
04148 Efferocytosis
113208867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113208867
Membrane trafficking [BR:
foc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113208867
Hops complex
113208867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
zf-RING_11
zf_RING_Vps8
zf-C3HC4
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_16
Glyco_hydro_81
zf-RING_Vps41
zf-C3H2C3
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
113208867
NCBI-ProteinID:
XP_026281884
UniProt:
A0A6J1SKS6
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MTSLFDQFEQPTSKSKSTMVPIRPEMSTTGFIHMKLEEETPIFVRQRVNFSPPDSITHLV
VSNNLLVLAMANQHLLRIDLQQPDKTEEVDISKTLSNQLRLSGLYLDPSGEHLLLPTVSR
QQGEIQPYCQLFYLNRRSTKVKQISKFRGSEVTSVAWSFNMTAESTTGPILLGTSKGAIF
EMEIKIDGDRIFGNSLEQYCKQVFDIGKQASNIPITGLEFHRIPGTETYFIIVTTLDRIY
EFVGSASNIEERPFLPQIFNNYLNKPEQFVSMASKLKYSKLQFYYPSGTSQPTQCAWLVE
QGLYCGEIDLSFSYDKVIAEQDLLHFPSTAPISFILTQFHALLMYADHIKGVSLLNHEVV
FEDVLNEPIGKLINITKDPLKGTVWAFTEKSVFKYKVTKEDRNVWQIYIEKGKFDLAKKY
CGNNPAFMDQVLVRQAEMFFENKQYDESAVHYAQTQSSFEEISLKFLKVRQMQALKLFLK
KKLDLLRPQDKTQITMIVIWVLELFLNQLGELRDKKLENSLDYIELQKEFDSFLKEKMVM
ECVKLNSEKVYSLIASHGDKANLVKLTSVNRDFEKVIRHHLYKGDYREALEVLKSQDRKE
LFYEFAPALMQAEPKQTVAALISQGRALKPVSLLPALIACDLRDPKAVDEAIYYLEFAVH
KLHANDHAIHNYLLMLYAKFQPTKLKKYLATQGEDVSTVHYDPHYALRLCREHKLNEACV
QLSALLGLWESAVDLALSENIQQAKDIASQPQYDTELQKKLWLKIAKHVVSEKNDIQQAM
EFLKQCPLVKIEDILPFFSDFVTIDHFKDAICTSLQVYNQRIKDLKDDMEEASKSAEIIR
DEIHSFRKRYTVVGSNDVCQECSLQLLLRPFYLFPCGHTFHSDCLLNELLPALPPGKRSK
LQEYRRQLASMSSKDDAISINSTSISARDQLKADIDAIVASECLYCGEMMIKSIDRPFVE
DDEYEQIMKEWE
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgactagtctgtttgatcagtttgaacagcctacatcaaaatcaaagtcaacaatggta
ccaatacggccagaaatgagtaccacgggttttattcacatgaagcttgaagaggagact
ccaatatttgtcagacagagagtcaacttttcacctcctgattctattactcatttagtt
gtgagcaataacctacttgttctagccatggcaaatcaacaccttctcagaattgacctt
cagcagcctgacaaaactgaagaagttgacatcagtaagactttgtccaaccagcttaga
ctctcaggattatatcttgatccatctggagaacacctcctcttacccacagtgtctcgc
caacaaggagagatacaaccttactgtcagctgttctacctgaacagacgttctaccaaa
gtcaaacagattagtaaatttcgaggatcagaggtaacatcagttgcatggagttttaat
atgacagccgaatctacaacaggaccaattctattaggcacatccaaaggagctattttt
gagatggagattaaaattgatggggacagaatttttggaaatagccttgagcaatactgt
aaacaggtctttgatattggcaagcaagcaagcaacatccctataactggcttagagttc
catcgaatacccggcactgagacttatttcatcattgtaactacccttgaccgaatttat
gagtttgtaggatctgcaagcaacattgaagaaagaccattccttcctcaaattttcaac
aattacctcaacaaaccagaacaatttgtaagcatggcatcaaagttgaaatattcaaag
ctgcaattttattacccctctggaacaagccaaccaacacagtgtgcatggctagttgag
caaggactgtactgtggagagattgatttgagcttcagttatgataaagttatagcagaa
caagacttgctccactttccatccacagcaccaatctcatttattcttactcaattccat
gccttgctcatgtatgctgatcacatcaaaggtgtatctctcctaaaccatgaagtggtt
tttgaagatgttttaaatgagcctattggaaagctcattaacattacaaaggacccactg
aagggtaccgtttgggcttttacagaaaaatctgtgtttaaatataaagtgacaaaagaa
gatcgaaatgtatggcaaatctacattgaaaagggaaaatttgatttggccaagaagtat
tgtggtaataaccctgcttttatggaccaagtacttgttcgtcaagcagaaatgtttttt
gagaacaaacagtatgatgaaagtgctgtacattatgctcaaactcaatcttcatttgaa
gaaatctcattaaaattcctcaaagtacggcaaatgcaagcccttaagcttttcttaaag
aagaaattagatttattgcgccctcaagataagactcaaattacaatgattgtgatatgg
gtgctggaattgtttttgaatcaattaggtgaactcagagacaaaaaactggaaaactca
cttgattatattgaacttcagaaagagtttgactcatttctgaaagagaaaatggttatg
gaatgtgtgaaacttaacagtgaaaaggtttatagcttgattgctagccatggagataaa
gctaaccttgttaagctgacaagtgtcaacagagattttgagaaagttatccgtcatcac
ttgtacaaaggcgactatcgagaggctcttgaagttttgaagtcccaggatagaaaagag
ctcttttatgaatttgctccagctcttatgcaagcagagccaaagcaaacagttgctgct
ctaatatcacagggtcgtgctcttaaacccgtcagtctattacctgcccttattgcctgt
gacttacgtgatccaaaagctgttgatgaagctatatattatcttgagtttgctgttcac
aagctgcatgctaatgatcatgctatacataattatcttctcatgctgtatgcaaagttc
caacccaccaaactgaagaaatatctggccactcaaggggaagatgtctctactgttcat
tatgatccacattatgcattgcggttgtgccgggaacacaaattaaatgaagcctgtgtt
cagttgtctgcactccttgggctatgggagtctgctgttgaccttgccctttcagaaaat
atccagcaagcaaaggacatagcttcccagcctcagtatgatacagagttgcagaagaag
ctttggttaaaaattgccaaacatgttgtcagtgaaaaaaatgacatccagcaagctatg
gaattcttgaaacaatgccctcttgttaaaatagaagacattttaccgttcttttcagat
tttgtaacaatcgatcattttaaggatgcaatttgcacatctttgcaggtatacaatcaa
agaatcaaggatctcaaggatgacatggaagaagcttccaagtcggctgaaattatcaga
gatgaaattcactcgttccgtaaaaggtatacagtagtgggaagtaatgatgtctgccaa
gaatgttctctgcagctattgctgagaccattttacctgtttccttgtggacacacattt
cattcagattgtctactgaacgagcttttacctgccttacctccaggaaaacgtagtaag
ctccaagagtaccgtcgacaacttgcttccatgtcctccaaagatgatgctatttcaatc
aattctaccagcatatcggctagagaccagcttaaagctgatattgatgcaattgtggca
tccgagtgtctctattgtggagaaatgatgatcaaatccattgatcggccttttgttgag
gatgatgaatatgaacaaataatgaaagaatgggaatag
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integrated database retrieval system
