Frankliniella occidentalis (western flower thrips): 113209010
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Entry
113209010 CDS
T07591
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03420
Nucleotide excision repair
foc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113209010
09124 Replication and repair
03420 Nucleotide excision repair
113209010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
foc04121
]
113209010
03400 DNA repair and recombination proteins [BR:
foc03400
]
113209010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
foc04147
]
113209010
Ubiquitin system [BR:
foc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
113209010
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
113209010
TCR (transcription coupled repair) factors
Cul4-CSA complex
113209010
Exosome [BR:
foc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113209010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HTH_34
HbrB
Motif
Other DBs
NCBI-GeneID:
113209010
NCBI-ProteinID:
XP_026282111
UniProt:
A0A6J1SUE0
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MSNHIRGRIVGREDSENSPVQKRTLLSAEYPGSKKLKLADEMTDTANQKRPNFSALSTSP
NGINKTASLVNTKPGAAKKLVIKNLKEKPKLPENYEEQTWEKLKEAVIAIQTSKSIRYSL
EELYQAVENMCNHKMASHLYLNLTTLAEQHVKANIQQFMAESMDRHFFLKKMNECWQSHC
RQMIMIRSIFLYLDRTYVLQNPTIHSIWDMGLEMFRHHIVMNTLVQTRCVDGLLMLIEKE
RQGDAVDTTLLKSLLRMLSDLQIYQEAFESKFLLATERLYAAEGQRLMQEHDVPEYLAHV
NKRLAEENERLLHYLDSSTKWALIHTVEKQLLTEHLTAVLQKGLDLLLEENRISDLCLLY
KLFTRVKTGLQELCTNFNAYIKKKGRTIVIDPEKDKTMVQELLDFKEKMDNIVSKCFQSN
EKFSNSLKEAFEQFINQRTNKPAELIAKFVDSKLRAGNKEASEEELERLLDKIMVLFRFI
HGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKD
INVAFRQYMSNARTAHLLNTIDLTVSILTMGYWPTYVAMDVTLPAEMVQYQNFFNRFYLG
KHSGRKLQWQPTLGHCLLKAEFPQGRKELQVSLFQALVLLLFNQADNITFEEIKAATNIE
DGELRRTLQSLACGKARVLQKTPRGREVENNDVFAYDSQFTNKLCRIKINQIQMKETNEE
QKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLISELYNILKFPVKPADLKKRIESLI
DRDYMERDKDTTNQYNYVT
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcacattaggggtcggattgtgggacgtgaggattcagaaaatagtccagtt
cagaagaggaccttgttaagcgctgagtatcctggcagcaagaagcttaagctggccgac
gaaatgacagacacggcaaatcagaagaggccgaacttttcagctctgagcacaagtccc
aatggtattaataaaactgcatctctagtaaataccaaaccgggcgctgcgaaaaagctt
gtcatcaaaaacttgaaagaaaaaccaaaacttccggaaaactatgaagagcagacttgg
gaaaaattgaaagaagctgtcattgccattcagacctcaaagtctatacgctacagtctg
gaagagctttatcaggctgttgaaaatatgtgcaaccacaaaatggcctctcatctttac
cttaatctcacaacattggctgaacaacatgttaaagctaacattcagcagttcatggca
gaatctatggatcgacacttcttcttaaaaaagatgaatgaatgttggcaatcacattgt
cgacagatgattatgattcgaagtatatttctttatctcgaccgaacttatgttctacaa
aatccaacaatacactcgatttgggacatgggtctggaaatgttcagacaccatattgtg
atgaacactcttgttcagactcgatgtgtcgatggcctcctcatgcttattgaaaaagaa
cggcaaggagatgcagttgatacaacgcttttaaaatccctcctgcgaatgctctctgat
ttacaaatatatcaagaggcatttgagtctaagtttcttttagccacagaacgtctatat
gctgctgagggtcagcgtttaatgcaagaacatgacgtacctgagtatttagcacatgtc
aacaaacgtcttgctgaagaaaatgaaagacttctgcactatctagactcatctacaaag
tgggctctcatacacactgtagagaagcaacttttaacagaacatttaaccgcagtgctg
caaaaaggactggatcttttacttgaagaaaacagaatatctgatctatgtttgctgtat
aagctcttcaccagagtaaaaactggtcttcaagaattatgtaccaacttcaatgcttac
attaagaaaaagggtcgtacgattgttattgatccggagaaagacaaaacaatggtccaa
gagctgcttgattttaaggaaaaaatggacaatattgtttctaaatgtttccaaagcaac
gaaaaattcagtaacagcttgaaagaggcatttgaacagtttattaatcaaagaactaat
aagcctgctgaacttattgccaaatttgttgattcaaaacttcgtgctggaaacaaggag
gcatcagaagaagaactggagcgtttgttggataaaattatggttctctttagatttatt
cacggcaaagatgtgtttgaagcattttacaaaaaggacctggcaaagagattattagtt
ggtaaatcggcttcagtggatgctgaaaaaagtatgctgagtaagctaaagcaagaatgt
ggtgggggcttcacttccaaactggaaggcatgtttaaagatatggaactaagcaaagat
attaatgttgctttcagacagtatatgtccaatgcacgtactgcacatttactgaacacc
atagatttgacagtaagcattcttaccatgggatattggcctacatatgttgccatggat
gtaactcttcctgccgaaatggtccagtaccaaaatttctttaatagattctatttagga
aagcattcaggcagaaagctgcaatggcaacctacattaggtcactgcttgctcaaggct
gaatttcctcagggtaggaaagagcttcaagtctctctcttccaggctcttgtactttta
cttttcaaccaagctgataatataacatttgaagagattaaagcagctactaatattgag
gatggagaattaaggcgaactcttcaatctctagcatgtggtaaggctagagttctgcaa
aagactcctcgaggtcgtgaggttgagaacaatgatgtgtttgcttatgattctcagttc
acaaataaactgtgccgcatcaaaattaatcaaattcaaatgaaagaaactaatgaagaa
cagaaagcaacagaggagagggtcttccaagacagacagtatcaaatcgatgctgctatt
gtaaggattatgaaaatgaggaaaaccttaagtcataaccttctgattagtgaactttat
aacatattgaagttccccgtaaagcctgctgatttgaagaaacgcattgaatccttgata
gaccgagactacatggagagggacaaagacacaacaaaccagtacaattatgttacctaa
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