Frankliniella occidentalis (western flower thrips): 113209230
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Entry
113209230 CDS
T07591
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113209230
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
90S particles
Other 90S particles
113209230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
HAT_Syf1_CNRKL1_C
TPR_19
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Suf
HAT_Syf1_M
ARM_TT21_N
OB_RRP5_4th
TPR_CcmH_CycH
TPR_16
ARM_TT21_5th
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
113209230
NCBI-ProteinID:
XP_026282435
UniProt:
A0A6J1SSY0
LinkDB
All DBs
Position
Unknown
AA seq
1555 aa
AA seq
DB search
MAIEEKAFPRGGAPVFSNTKKSNLFDQKKKKIKNKKKVKHQAVTGSDPKLISLDDLSYKT
LTEGMIVLGRVTEITDYYLHVSLPGLISGRVPVTQISEPYSQLLQSMSQSDDNIEALCPL
SELFYKGQLVLAQVWQIRKTSDNRHVITLSLDPRVLYTAWSHAAMAKKGLIITAAVKSKE
EHGYVMDCGVNGLRSFLKDDKVQSYCDTFNSGRPLAVGQLVRTVVVKGEPSPAASKVELS
ADPDDVCKHEINGSQPVDMQHIMPGMRFKLSVADSMRDGVMVNFMSSSGYLHRNHIPISS
SAKEAMPHLEHGSSIFGRVLYITPIVKHVFFSALPCVSDPLMEIPKPSPAETNFGIGDTV
NSAKVTGVSGKGIFLNLGKKNSKVRGFVPERRIGFNFKGKVEDDANSATMLQRLRDKYPL
GSTVRCRLIHYDSMIETYVCSMEKSVLNEKYLTFSDVQVSSVVPCVVDQIRDGGIVVRVG
MLNGFVPAAHSADVPLHQPAKKYNPGLRVTGRVLKVDLDKHKLIITLKNSLVTSQDPIIM
SCQSARKGTCYTGTVVAISSKGAIVSFFGDAKGFLENSEHCVPTGHKFFLGQLVRCYVLR
RNDNQLKLTLIPPSQSFKLDQAACKTVLVGQAYTLEVLSVENDGLQVKITDEGESYNATG
VIPIFQLSDNLDMCKLLLATFEIGTVLTNVWCFSNGKGKEPVVFSMRSSVTQFFKGTHGK
IASKKLLEAVCPGWILPCSVQKIHPSYLLLQVPLASVSGLVKVSRELVCEQDEDILSIGL
VEGQGIQAKVLKVIAEKNTLLLGCRKSELWDGELETCVLYLSKYLSDQERLQEYAKKAGS
PLGAFNVGGKVSGVVSEKTDWGFVLKLTNGARGEVTFFNAESDDLDVGTRVNGKILNIDF
LRGHVELSIRKEVCASIHERSSETGLFIDPDVQLRGPTLLVTPEFILIRLKGENKPCLAY
IPTYLYPHGKSILSAPEPFFGIDRKVIVKRCSNGIVICLPKEVVENRKKIIKQKEKIEKK
KTVKKERYFQIMAPEDIKKEDEDDELESAQRVLDTQNDIKIIDAEMDEISDQESVDVSDD
SDSDSPDNLEKKSDHEKENVTQNSSKLGKRKLSNVGQDLELSENSKVKKKKNKELSLNES
NDPEVEEVTIKKKRKDACLEALQDDGPSGLGPQAKKKKKKVIEVDLESIDDSACGDNLVS
SNGKKPTLENPGFMWDIDPTKFMEVLEPTKDNSSSDDDSDEDQNPKKKKSKKSAAERREA
TRLEEERLQKVERELLDPNRQLSSCDDFDRTVLANPDNSAIWLRYMAFHLQATEIEKARA
VAHRAIKSISYREEQEKLNVWLGLLNLENLYGTPDSLKTTLDQALQSNDPYKIRTHMVRL
YAENGKNRELESEVRLVVKKFKETPGMWLDIGTVLMTCGYIDKARTILQQALPHMRSKKE
SVDLVVQFALMEARNNNMEQAKALMDPILASYPKRLDVWIVYCDMLVRAKEIAEARELLE
RAVSQKMPSQKMKTLFTKYLQFEEVHGSTEGQEKVRKMAADYVKQVSGEDTKEDI
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggctattgaagaaaaagcttttcctcgtggtggggctcccgtattctcaaacactaag
aaatcaaatttatttgatcaaaagaaaaagaagataaagaataagaaaaaagttaaacat
caggcagtcacagggtcagatcctaaattaatttcattggatgacttgtcatacaagact
ctcactgagggaatgatagtattaggacgagtaacagagatcaccgactattacctccat
gtttctttgcctggcttaatatcaggaagggttcctgtcacacaaatttcagaaccttac
tcgcaattgttgcagtccatgagccaaagtgacgacaatatagaggctctatgtcctctc
tctgagctattttataaaggtcagcttgttttggctcaagtatggcaaattcgcaaaacc
agtgataaccggcatgttatcactttaagtcttgatcctcgagtattgtatactgcttgg
tctcatgcagccatggcaaagaagggtcttataatcacagcggctgtcaaaagtaaagag
gaacatggatatgtaatggattgtggtgtaaatggtttaagaagtttccttaaagatgac
aaggttcaaagctattgtgacacatttaactctggaagacccctagctgttggtcagtta
gtgcgaactgttgttgtcaaaggggaaccatcaccagctgcttcaaaagttgaactctct
gctgaccctgatgacgtctgcaaacacgagattaacggttctcaaccggttgacatgcaa
catattatgcccggaatgaggtttaaattatctgttgctgattccatgcgtgatggggtg
atggttaatttcatgtcctcttctggttatcttcaccgtaatcatattccaatatctagt
tctgcaaaagaagccatgcctcacctagagcatggctcctcaatttttggacgtgtgctg
tacattacacctattgtaaagcatgtcttttttagtgctttaccttgcgtcagtgaccct
ctgatggaaattccgaaaccttctcctgctgaaactaattttgggattggtgacacagtt
aattctgctaaggttactggagtgagcgggaaaggaatttttctgaaccttggcaaaaag
aatagcaaggtccgtggtttcgtaccagagcgccgcattggttttaattttaagggtaag
gtagaagatgatgctaattcagcaacaatgttacaacgattgagggataagtatcctctt
ggaagcactgtgcgatgcagactgattcactatgatagcatgatagagacctatgtctgt
agtatggaaaaatcagttttgaatgagaagtacctgaccttttctgatgtacaagtcagt
tctgtagtgccatgtgtggtggaccaaattcgagatggaggaatagttgttagagttggc
atgttgaatggatttgtaccagcagctcactctgcagatgttccattacatcagccagca
aagaagtataatcctggtctcagggttacaggaagggttctgaaagtggatcttgataag
cataaattaataataaccctgaaaaactcacttgttactagccaagaccccattataatg
tcctgccagagtgctcgcaaagggacctgttatacaggcactgtagtggcaatatcatca
aagggtgccattgtgtctttctttggtgatgcgaaaggtttccttgaaaacagtgagcac
tgtgtccccacaggtcataagttcttccttggacaacttgtgagatgctatgtcctcaga
cgtaatgataatcaactgaaacttactcttattcctccaagtcaaagttttaaacttgac
caagctgcttgtaaaacggtgttggttggacaagcttacacccttgaagtcttatcagtt
gaaaatgatggtctccaagttaagataactgatgagggagagtcctataatgctactggt
gtcattcccatcttccagctgagcgataaccttgatatgtgcaaattacttcttgctact
tttgaaattggaactgtgttgacgaatgtttggtgcttcagcaatggtaaagggaaagaa
cctgtagtgttttcaatgaggtcctctgtaacccaatttttcaagggcactcacgggaaa
attgcttccaaaaagcttctagaggctgtctgtcctggttggattctaccatgctctgtt
caaaaaattcatccctcctaccttttactccaagtacctcttgcctcagtatcaggtttg
gtcaaagttagccgtgaactggtgtgtgagcaagatgaagatattttaagtattggttta
gtggaaggccaaggaattcaagcaaaagttctaaaagttattgctgaaaaaaacaccctt
cttttagggtgcaggaagagtgagctttgggacggagagctggagacttgtgtcttgtac
ctctcaaagtatctctctgatcaagagcgtctacaggaatatgctaagaaagcaggaagt
cctcttggagcttttaatgttgggggcaaagttagtggtgtggtatcagaaaaaactgat
tggggttttgtgttaaaacttacaaatggagcccgtggggaagttacatttttcaatgct
gaaagtgatgaccttgatgtaggaactagagtaaatggcaaaattcttaatattgatttt
ctgagagggcatgttgaattgtccatacgtaaagaagtttgtgcttctatccatgaaaga
tcatctgaaacaggacttttcattgatccagatgttcagcttcgaggtccaaccctcctt
gtaactcctgaatttattcttattcgactcaaaggagaaaacaagccttgtcttgcatat
attcctacatatctgtatcctcatggcaaatcaatcctcagtgcaccagagcccttcttt
ggtattgacaggaaagttattgtgaaaaggtgcagtaacggaatagttatttgtttacct
aaagaagtagttgagaacagaaagaagataattaaacaaaaggaaaagattgagaagaaa
aaaactgtgaagaaggaaagatactttcagataatggctccagaggacattaaaaaggaa
gatgaggatgatgagttagaatcagcccaaagagtcttggatacacaaaatgatattaaa
attattgatgctgaaatggatgaaataagtgatcaggaatctgttgatgtaagtgatgat
tctgacagtgactcccccgacaatttggaaaagaaatcagatcatgagaaagaaaatgtt
actcagaattcatcaaagttggggaagcgaaaactgtcaaatgttggtcaggatcttgaa
ttgtctgagaatagtaaagtgaagaaaaagaagaataaggaactaagcctgaatgaatca
aatgatcctgaagtagaagaagttacaattaagaaaaaaaggaaagatgcttgtcttgag
gctctccaagatgatggcccaagtgggctaggacctcaggctaagaagaaaaagaaaaaa
gttatagaggttgatcttgaaagcattgatgattctgcttgtggagacaatttagtgtcg
tcaaatggaaagaaacctacgttagaaaatcctggttttatgtgggatattgacccaaca
aaattcatggaggttttagaaccgacaaaagacaattctagcagtgatgatgattcagat
gaagatcaaaatccaaagaaaaagaaaagtaagaagtcagctgcagagcggagagaggct
accagacttgaagaagagagattacagaaagttgaaagagaactattggatcctaatcgt
cagttatcatcatgtgatgactttgataggacggttttggctaaccctgataactctgca
atttggctacgatatatggcatttcatcttcaggccaccgaaattgaaaaggctcgagct
gtcgctcacagagctattaagtcaatttcgtacagagaagaacaagaaaaattaaatgta
tggctaggtcttcttaatttagaaaatctgtatggtacgcccgacagtttgaagaccaca
cttgatcaagctctccagtcaaatgatccctacaagatacggacacacatggtcagatta
tatgcagaaaatggtaaaaatagagaattagagagtgaagttaggcttgttgtcaagaag
ttcaaggaaactccaggaatgtggcttgacataggcactgtccttatgacctgtggatat
attgataaagcaaggactattttgcaacaagccctaccacacatgaggagcaaaaaagag
tcagtagatcttgttgtgcaatttgccttgatggaagcccgaaataataatatggaacaa
gccaaggccctcatggatccaatattagcatcgtaccctaagagactggatgtgtggatc
gtctactgtgatatgcttgtaagagctaaagaaattgcagaagcgagagaactcttagaa
agggctgttagtcaaaagatgccatctcagaaaatgaaaaccctttttactaaatatctg
cagtttgaagaagttcatggctctacagaaggccaagaaaaagttcgaaaaatggctgct
gattatgttaagcaagtttcaggagaagatacaaaggaagatatttag
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integrated database retrieval system
