Frankliniella occidentalis (western flower thrips): 113209231
Help
Entry
113209231 CDS
T07591
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113209231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113209231
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
113209231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
Motif
Other DBs
NCBI-GeneID:
113209231
NCBI-ProteinID:
XP_026282436
UniProt:
A0A6J1SVF5
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MALQIQPKEVKKPGPGMPGAGPSLASGSATTSQQPQVQEFSIRVPKNTKKKFHMMRFNST
LNVDFTTWKQIRMERENNAKEFKGFDEDMPKFGAGSEFGREAREEARRKKFGIVARKYKP
EDQPWILKSGGSKGKKFKGIREGGVSENAGYYVFMKAEDGIIEAYPLQEWYNFQPIQRYK
ALSAEEAEEEFGRRNKQQNFFSLMMRKRLRPDEDVDLDDPDEAKGKRKGGGGKKSKELKI
SDMEEWMDSDDESESDGDEEKDDDKEEKAEKKKKGKKEAEAKKKKKKKDSDDEAFEESDD
GDEEGREVDYISDSSVSVSDHDEKAKDEMKGVAEEDALRKLLTSDEDSEEEEKKKEGEEN
SDAEDKKEGEESKKDAAETKKAATEKDRSKKKKKKKREADSSETPSSKTASTSNDKKDKG
NDSMSDLSSDSEPEGSKKKDSKKDAKESNSGNSSRSASPALQPDGKRKATSDALAAVAAK
KAKLDNFASASASPYLAGASEAGITEDAVRRYLMRKPMTTTELLQKFKSKKTGLSSDQLV
NIMTQILKKINPVKQTIKGKMYLSIKAQGAPKPAEST
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggctctacaaattcagcccaaagaagtgaagaaacctgggccgggtatgccgggtgct
ggtccatcgttggcctcaggttctgctaccacatcccaacaacctcaggtgcaggagttt
tctattcgtgttccaaagaatactaagaaaaagttccatatgatgcgttttaattctaca
cttaatgttgacttcactacatggaagcagatccgaatggaacgggaaaacaatgctaag
gaatttaaagggtttgatgaagatatgccaaagttcggagctggtagtgaatttggtcgc
gaggcacgtgaggaggcgcggcgcaagaaatttggaattgtggcaaggaagtacaaacct
gaagatcaaccatggattttaaaatctggagggagcaaagggaaaaaatttaaaggtatt
cgtgaaggaggggtgtctgagaatgctggatattatgtttttatgaaagcggaggatgga
atcattgaagcgtatccattacaagagtggtacaattttcaacccattcaacgttacaaa
gcactttccgctgaagaagccgaggaagaatttggaagacgaaacaaacaacaaaacttt
ttctcgctcatgatgaggaaacgtttgcgtcctgatgaggatgtggaccttgatgaccca
gacgaagctaaaggaaaacgcaaggggggaggtggaaagaaatctaaagaattaaaaata
tcagacatggaggaatggatggattcagatgatgaatctgaatccgatggtgatgaagaa
aaagatgatgataaagaagaaaaggctgagaaaaagaaaaaaggaaagaaagaggcagaa
gcaaagaagaagaagaaaaagaaagattcagatgatgaggcttttgaagagagtgatgat
ggtgatgaggaaggcagagaagttgactatatatcagattcatcagtcagtgtttcagac
catgatgaaaaggctaaagatgaaatgaaaggtgttgctgaagaagatgccctgaggaaa
ctcttaacttctgatgaagattctgaagaagaggaaaagaagaaagagggagaagagaac
agtgatgccgaagataagaaggagggtgaagaaagcaagaaggatgcagctgaaaccaaa
aaggctgcaacagaaaaagaccgcagcaagaagaaaaagaaaaagaagcgtgaagcagat
agttctgaaaccccatccagcaagactgcatcgacttcaaatgataagaaagacaagggt
aatgattctatgagtgatttgagttcagattcagagcctgaaggaagtaagaagaaggat
tccaaaaaggacgcaaaagaatcaaatagtggaaatagctcaagatcagccagtcctgca
ctgcagccagatggtaaaaggaaagctactagtgatgccctagctgctgttgccgcaaag
aaagccaaattggacaactttgcttctgcttcagcttcaccgtatttagctggagcaagt
gaggccggtatcactgaagatgccgtgcggcgttatctgatgaggaaaccgatgacaacg
actgaacttctccagaagtttaaaagcaaaaagactggccttagctcagatcagcttgta
aatattatgactcaaattctcaagaaaatcaaccctgtgaagcaaactatcaagggcaag
atgtatctttcaattaaggcgcaaggtgcaccgaaacctgctgaaagcacttag
DBGET
integrated database retrieval system
