Frankliniella occidentalis (western flower thrips): 113209242
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Entry
113209242 CDS
T07591
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113209242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113209242
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113209242
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113209242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Spectrin_Anc-1
DUF2730
Motif
Other DBs
NCBI-GeneID:
113209242
NCBI-ProteinID:
XP_052122536
UniProt:
A0A9C6WV78
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MAASRKLQGEIDRCHKKVAEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QLKVWIASPDIKDKGPLVDDRKLIETQMERFKIVERETKTKAYSKEGLGAAQKLDPAQKE
REEISCWLVNSIDALNIQLDQFESEIESLLAGKKKRLDKDKQDRMDELKGKLEKHRFHIR
KLETLLRMLDNTAVEVGQIRKIKDDVEYYIEASQDPDFEENEFIYDDIIGLDEIELSGVG
LPSSATTDSNNSNDTGGTPTSTRSGGSPPTSPLQNLNHSSESPTPDAEKKKKDDQMAKVS
PVKPTAVRASQQNSLINSTGIIPPIKPVMVTPSKTSTGVAHSTPNNSSPSSLMNHSVGNF
AAVAAANSHPAPPTTPTASTNSNNISSSKSTHSTENGTIPVSSPHSQPPSLMPAIGSSNS
QQVPSLLHHPVPQQSLVDTRPVSSSNNSSSNVSSTSTSNPPPHLQLASAGSTPPPAVSSS
NQMSSVVGSKQTRMQGMVNSVDHHQYNNTTVNCSSPPSPVSSSASPLPAVGPVSAAIAAA
SSAGSISLVSPSPVTSAPTFGLGTSSVTALLSSTPVQQQTPQSQPISQPQLALQLQSQSQ
PQHQQPQAQQQQQQQQQQQQPTQQQQQPPTLNGPNVGDVAGLSSLKSIAQQAIDRAGLEV
PPPETSRSLLESKMMMPVTTEAHIPPLLGVAPLGPVPLQKEHQRQFQKLEAAYYHMPLPS
DSEKLRSYLARNPCPAPPYYPQVPLPDTDSLEFYQRLGNETLFFIFYYMEGTKAQYLAAK
ALKKQSWRFHTKLMHWYQRHEEPRVINDEYEQGSYIFFDFEKWIQRRREGFTFEYKYLED
RDLN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttcaagaaagcttcaaggagaaatagacaggtgtcataagaaagttgcagag
ggtgtggaaacatttgaagacatttggcagaaggtccacaatgccacaaacagtaaccag
aaggagaaatatgaggctgatctcaagaaggagattaaaaagttgcagagattacgggat
cagctcaaggtttggattgcatccccggatatcaaggataaagggcccttggttgatgac
cgaaagttaatagaaactcaaatggagaggtttaaaatagttgagcgggaaacaaaaacc
aaagcttactccaaagagggcctcggagcagcacaaaaactggatccagcacagaaagaa
cgcgaggagatcagctgctggctagtcaattccatcgacgcgctcaatattcagttggac
caatttgagtctgaaatcgagtccctccttgcgggaaagaaaaagaggttagataaagac
aagcaagatcgtatggatgagcttaaaggaaaattagagaaacaccggttccacatccga
aaacttgaaacattgttacgaatgttagataacactgctgtagaagttgggcagataaga
aaaatcaaggatgacgtggagtattacattgaagcatctcaagacccagactttgaagaa
aatgaatttatatatgatgacattattggcttagatgagatagaactatctggtgttggt
cttccttcatctgcaacaacagatagtaataacagcaacgacacaggtggtactcccaca
tcaacgagatcaggtggttcaccacccacttcacctcttcaaaatctcaaccattccagt
gagagccctaccccagatgccgaaaagaagaagaaagacgatcaaatggccaaagttagt
cctgtaaaaccaactgcagtgagagccagccagcaaaattccctcataaactctacaggg
attatccctcctattaaacctgttatggttactcctagcaagacatctactggagtagct
cactccacacctaacaatagctctccaagctcattaatgaaccattctgttggcaatttt
gctgctgtagcagctgccaatagtcaccctgcaccacctacaaccccaacagcttctact
aattcaaacaatatttccagcagtaaatcaactcatagtacagaaaatggcaccatacct
gtatcatcaccacacagccagcctccaagtttaatgcctgctattggatcatcgaatagc
caacaagttccatcgttacttcaccatcctgttcctcaacaatctttggttgacaccaga
cctgtgagcagtagtaacaacagtagcagcaatgttagcagtacaagcacaagcaaccca
cctccacacttacaactagcctcagcaggctcaacaccacctcctgctgtgtcctctagt
aaccaaatgtcatctgttgttggcagtaaacagacgcgaatgcagggaatggttaactct
gtagatcatcatcagtacaataatactaccgtaaattgctcgtcacccccatctccagtg
agcagttcggcatcaccactgccagcagtaggaccagtttctgctgctatagctgcagca
tcgtcggcgggttccatatctctggtctccccttcacctgtgacatctgcccctacgttt
ggcttgggcacgtcatctgttacagcattactatcatcaaccccagtgcaacaacaaaca
ccccaatctcaaccaatatcccagccccagttggcacttcaactccaatctcaatcccag
ccgcagcatcagcagccacaggcacagcaacaacaacaacagcagcagcaacagcagcaa
ccgactcaacagcagcagcaacccccaacattaaatggaccaaatgtaggagatgttgct
ggactgtcgtccctgaaaagtattgcccagcaagctattgatagagcaggtcttgaagtt
ccacctcctgagacaagtagaagtttgttggagtcaaagatgatgatgcctgtaacaaca
gaagctcacatacctcctttactgggagtagcacctttaggacctgttccattacaaaag
gagcatcagcgccaattccaaaagcttgaagctgcctattaccatatgcctttaccatca
gattcagaaaaattgcggtcctaccttgcaagaaatccttgtccagcaccaccgtattat
ccccaggttcccttgcctgacacagactccttagagttctaccaacgtttgggcaatgaa
accctttttttcatattctattatatggaggggaccaaggcacagtacctagcagccaag
gccctcaaaaagcaaagctggagattccacacaaagttaatgcattggtatcagcgccat
gaggagccaagagttataaatgatgaatatgagcagggctcttacatattcttcgacttt
gagaagtggatccagcgtagaagagaaggattcacttttgaatacaagtacttagaagac
agggacctgaactga
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