KEGG   Frankliniella occidentalis (western flower thrips): 113209524
Entry
113209524         CDS       T07591                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03020  RNA polymerase
foc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113209524
  09124 Replication and repair
   03420 Nucleotide excision repair
    113209524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:foc03021]
    113209524
   03400 DNA repair and recombination proteins [BR:foc03400]
    113209524
Transcription machinery [BR:foc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113209524
  RNA polymerase III system
   RNA polymerase III
     113209524
  RNA polymerase I system
   RNA polymerase I
     113209524
DNA repair and recombination proteins [BR:foc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113209524
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1 FRG
Other DBs
NCBI-GeneID: 113209524
NCBI-ProteinID: XP_026282866
UniProt: A0A6J1SWN9
LinkDB
Position
Unknown
AA seq 210 aa
MDDEAECYKLWRVKKTVMQLCHDRGYLVTQDELDQTLEQFKEQYGDKPSEKRPSRADLIV
LVAHNDDPTDQMFVFFPEEPKIGIKTIKTYCQRMQEENIHRAMIVVQQGMTPSAKQSLVD
MAPKYILEQFLESELLINITEHELVPEHVVMTPEEKQELLSRYKLKENMLMRIQAGDPVA
RYYGLKRGQVVKIIRSSETAGRYISYRLVC
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaagctgagtgctacaaactatggcgtgtgaagaaaactgttatgcagcta
tgccatgatcgtggttatctagttactcaagatgaacttgaccaaactttagaacaattt
aaggaacagtacggtgataaaccaagtgaaaagagaccatcacgagctgatctcattgtg
ctggttgctcacaatgacgaccctacagaccaaatgtttgtattctttcctgaagaacct
aaaattggaattaaaacgatcaagacatattgccagcgtatgcaggaagaaaatattcac
agagccatgatagtagttcagcagggcatgacaccatcagctaagcagtctttggtggac
atggctccaaaatacattttggagcagtttttggaatcggaattgctaatcaacattact
gaacatgagctagttcctgaacatgtggttatgacacccgaagaaaagcaagaattactg
tccagatacaaactgaaggaaaacatgctgatgcgaattcaagcaggagatccagttgca
cggtattatggactgaagagaggacaggttgtcaaaattattcgatcgtcggaaactgct
ggccgttacatctcctacagacttgtttgctga

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