Frankliniella occidentalis (western flower thrips): 113209753
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Entry
113209753 CDS
T07591
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113209753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
foc04121
]
113209753
Enzymes [BR:
foc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113209753
Ubiquitin system [BR:
foc04121
]
Ubiquitin ligases (E3)
HECT type E3
113209753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
113209753
NCBI-ProteinID:
XP_026283214
UniProt:
A0A6J1SPN1
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MSLDHGEETKEGDESMDTKPVEFSRVYCWGNTTNGELGLGGIEENQILCPRELSLSVQES
QCVQDIVCGDSHTLMLTAKGEVLSCGNNDHGQLGREQHRTRPELVTSLSDYSIQALACGG
CHSVAVTKWGQLFSWGSDSFGQLGLNSGSGDQWSAKTVKNLALSTVIQVACGQNHSLALT
NDGQLYSWGCNRFGQLGLGTTSEQERKPTLITSLAGIPIAIIACGSNHSFAVSKSGAVFG
WGKNTCGQLGLSDCSNRKYPAQLKSLRSIRVKFIACGEDFSVFLTRDGGVFTCGAGMHGQ
LGHGSHSNECLPRKVTELMGSTVTQVACGRRHTLALVPSRGRVYAFGLGGAGQLGNKSTG
NVSTPQVVIGPWLSPSGVSLVESAHECIIKRISSGGDHCFALVSLPHEQVRPDDFREYLP
NTQILTLLQKFIQECENCAADSQVDLELISYLETVFGSQACFNASFLLKNDEHYCCTSKH
PGVDIEEAESFFSNVGRLEHPTIKDIIMTCIVQRLIPSLVSSPPDVETLRIYLTLPMYHE
CENPKNYEKIHVPFAQAVSELKNEARKIVLMWWGAQSPDYFERLIRIYKNVVMYVIRLPV
VRESTVSQVIMRALEMLALLNRLNKDIGQKVPYNSFYLHDLQEVVDIQVDYVRWVAQIDP
SILLRFAPSLPPSSAVHFCNYPFVFNAEAKTLLLETDQSIQMHSAMQEATTDFLMNMLGG
INQYLVLNVSRENIVDDTIRELYQCDSKDLKKPLKIKFCGEEAEDAGGVRKEFFMLLLKE
ILDPAYGMFKSYEETNAIWFSEVTFEHEMMYYLIGLLCGLAIYNFTIINLPFPLALYKKL
LNEPVTLQDINDLSPTMAKSLQDILDYKDDDFEEVFGLSFQMSTEVFGEVKLFPLKPGGA
DIPVNLHNKTEYVDLYVDMLLNKMVEKHFKAFSQGFLKVCGGRVLELFHAAELMAVVIGN
ENYDWEELQRHAQYKNGYKEDDPTIRLFWEVFMELPLAEKKKFLMFLTGTDRIPLQGMKA
IKIIFQPTSDDKYLPVAHTCFNLLDLPRYGTKEKLRYKLLQAIQQNLGFSLV
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgatcatggagaagaaactaaggaaggagatgagagtatggataccaaacca
gttgaattttcacgtgtttactgctggggtaacacaaccaatggtgaacttggtctagga
ggaattgaagagaatcaaatattatgtcctcgagaattgtctttgtctgtgcaagaaagt
cagtgtgtacaagatattgtctgcggagatagccatactttgatgctgactgctaaaggt
gaagtcctttcttgtggtaacaacgatcatggacagcttggtagagagcagcatcgtaca
cgtcctgagctagtgacaagcctaagtgattactcaattcaagctctagcttgtggcggg
tgtcacagtgtcgctgttacgaagtggggccaactttttagttggggctccgattcattt
ggccagcttggtctcaactcaggctctggtgatcagtggagtgcaaagactgttaaaaat
ttagctctgtcaacagtaattcaagtagcttgtggtcagaaccattctttagctttaacc
aatgatggccaactgtactcctggggctgcaaccgttttggtcagctcggtttaggcaca
acatcagaacaagaaagaaaaccgactcttattacctcactagcaggcataccaatagca
attattgcctgtgggtctaatcatagctttgctgtctccaagtctggagcagtgttcgga
tggggtaaaaacacctgtggccagttgggtctctctgactgtagcaacagaaaataccca
gcccaactgaaaagtttacgctctataagagtgaaatttattgcctgtggggaagatttc
tcagtctttttgactcgcgatggtggtgtttttacctgtggtgctggtatgcatgggcaa
cttgggcatgggtcccactcaaatgaatgtcttcctaggaaggttacagaacttatggga
agcactgtaacccaggtggcatgtggcagaaggcacacgcttgctcttgttccatctcgt
gggcgcgtctatgcttttggccttggaggagctggtcagcttggcaataaaagcactgga
aacgtgtctacacctcaagttgtgataggcccatggcttagccctagtggggtgtcattg
gtagaatcagcccatgaatgtatcatcaagcgcatatcatctggaggagatcactgtttt
gctctggtttcacttccccacgaacaagtcagaccagatgatttccgggaatatttgccc
aacactcaaatactgacattgttgcagaaattcattcaagaatgtgaaaattgtgctgca
gactctcaagtagatttggagctcatctcttatcttgagacagtgtttgggagccaagcg
tgttttaatgcatcattcttattaaaaaatgatgagcattactgctgtacatccaaacat
cctggtgtcgatattgaagaggctgaatcattcttttccaatgttggaaggcttgagcat
cctacaattaaagatatcattatgacatgcattgtccaacgacttataccaagcctggtt
agttctcctcctgatgttgaaacactgagaatatatctcaccctaccaatgtatcatgaa
tgtgaaaatcccaaaaattatgagaagatccatgttccttttgctcaagctgtatctgaa
ttgaagaatgaagctcgtaaaattgtattaatgtggtggggagcacaatcaccagattac
tttgaacgcctcattcggatctataaaaatgttgtcatgtatgtgattcggcttccagtt
gtgagagagagcactgtaagccaagtaatcatgcgtgcccttgaaatgttagcattattg
aaccgccttaacaaagatattggccaaaaagtcccatacaactcgttttacttacatgat
ttgcaagaagttgttgatatccaagtggactatgtgcggtgggtggcacaaattgatccc
agtattttattgagatttgcaccttccctcccaccttccagtgcagtccatttctgcaac
tatccttttgtatttaatgctgaagctaaaactttattgcttgagactgatcagtcgatt
caaatgcattcagcaatgcaagaggccacaacagattttcttatgaacatgcttggtggt
ataaatcagtatcttgtgcttaatgtcagcagagaaaatatagttgatgatactattagg
gaactgtaccaatgtgatagcaaagatttgaagaaacccttgaaaataaagttttgtgga
gaagaagctgaagatgctggtggagttcgaaaagaattcttcatgttgcttttgaaggaa
atccttgacccagcatatggaatgttcaaatcatatgaagaaacaaatgccatttggttc
agtgaagttacatttgaacatgaaatgatgtattatctcattggacttctgtgtggtctt
gccatatacaacttcaccatcatcaatttgccttttcccttagccctctataagaaattg
ttaaatgaacctgttaccttacaggatataaatgacttatcacccactatggcaaagagt
cttcaagacattttggactacaaagatgatgactttgaggaagtatttggattgtctttt
cagatgtccacagaagtatttggcgaagtgaaattatttccattaaaacctggtggtgct
gacatacctgtcaaccttcataacaagactgagtatgtggacctctatgtagacatgctt
ctaaataaaatggtcgaaaagcattttaaggctttctcccaaggatttttgaaagtatgc
ggtggacgtgtcttggaacttttccatgctgcagaattgatggcagttgttataggcaat
gaaaattacgattgggaagagctacagcgtcatgctcagtacaaaaatggctacaaagaa
gatgaccccactattcgcctcttttgggaggttttcatggaactgccattagctgaaaag
aaaaagttcctcatgttcttaacgggaactgatcgcattcctctccagggtatgaaagca
atcaaaataatttttcagccaacctctgacgacaaatacctaccagtagcacacacttgt
ttcaaccttctagatttgccaagatatgggacaaaagaaaaactacgctataaattgctt
caggctattcaacaaaatcttgggttttcacttgtctaa
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