Frankliniella occidentalis (western flower thrips): 113210259
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Entry
113210259 CDS
T07591
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113210259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foc03400
]
113210259
Enzymes [BR:
foc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
113210259
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
113210259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
113210259
NCBI-ProteinID:
XP_026283931
UniProt:
A0A6J1SZN8
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All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MFCAAFRRFVVWSKRFACGDRVIANFVLKFTEPIEFRSGGTLPVCSGTRFCAEFYSTRTV
QPILLINMSPRGKAKAKKNTEENGSEKRVRESRNVKAASYKDFSDSEDDKPVRRRKKDSD
SEVSLSEEEKPKKVVAKGRGRAAPRSKKQESESDEASEFNSDESSGGDSRKKKKKPARKP
VRSLRTPQRASYKDLSDSEDESNNEEEDDEESSEKEDKRAGGKRKRGSPPKKVGKKSKKN
ESSGSEDEELDEEEEEEVEDEEENEEDGEGKGKADKPSSKKKAVDETSSEPGNKSKGESE
KKVEKSSRPEHELSEEEDGDEEMEKEQPVKSDSKEVKDAGNDTKKRGRPPKNAAKVEEDE
DDDDAEEEEPLPKKAKAGEKALLNKTESNYASIDFSSEAKTKDGKPWNFKISSWNVAGLK
AWVKKNGMEYIKREDPDIICLQETKCSEKKLPPESKVEGYHAYWHSGEKEGYAGVAILSK
TKPLDVKFGIEKTELDNEGRVITAEYEKFYLVNVYVPNAGQGLKSLPRRLEWDPAFRAYL
KSLDEKKPVILCGDLNVAHNEIDLANPKTNTKSAGFTPQEREGMTELLKQGFVDTFRSLY
PDKTGAYSFWTYMSNARSRNVGWRLDYFITSERFVPQICDNVIRNEVFGSDHCPITLFAN
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcgcggcctttcgtcgttttgttgtttggagtaagcgcttcgcttgtggggat
cgcgttattgcgaatttcgttctaaagtttacggaacctattgaattccgttcgggtggt
acattgcccgtttgttcgggcacgagattttgcgcggaattctattctactcgcactgtg
caacccatcttactgatcaacatgtcaccaaggggcaaagcgaaggcaaaaaaaaacact
gaagaaaatggaagcgagaaacgcgttagagaatcaaggaatgtaaaagccgcttcgtac
aaagatttttccgattctgaagatgataagcctgttcgtaggaggaagaaagactcagat
tccgaggtatcactttctgaagaagagaaacctaagaaagtagttgctaaaggaagaggt
agggctgcaccacgatcgaaaaaacaggaatctgagtcagatgaggcatcggaattcaac
agtgatgaatcctctggaggggattcaaggaaaaagaagaagaaaccagccaggaaacca
gttaggtctctacgaactcctcaacgagcatcttataaagacctatcagattccgaagat
gagtctaataatgaagaggaggatgatgaagaatcatcagagaaggaagataaacgagct
ggaggcaagcggaagagaggtagtccaccaaagaaagtgggaaaaaagagcaagaaaaat
gaatcgtcaggatctgaagatgaagagctggatgaggaggaagaagaggaagtagaggat
gaagaggaaaatgaagaagatggggaaggaaagggaaaagccgataaaccctcctcaaag
aagaaagctgttgatgagacttctagtgaacctggcaataaatctaagggagaatcagag
aaaaaagttgaaaagtcttcaagaccagaacatgagttatcagaagaggaagatggtgat
gaggaaatggagaaggagcagccagtcaaatcagattcaaaagaagttaaagatgctgga
aatgatacgaaaaagagaggaaggccccctaagaatgctgcaaaggttgaggaagatgaa
gatgatgatgatgcggaggaggaagaaccactacccaaaaaagcgaaagctggggagaag
gccttattgaacaaaacggaaagtaactatgcttcaattgatttttcttccgaagcaaaa
acaaaagatggtaagccatggaattttaaaatatcatcttggaatgtggctggtctgaag
gcatgggtaaagaaaaatggaatggaatatattaaacgtgaagatcctgacatcatttgt
ctgcaagagacaaaatgctctgagaagaaactacccccagaatcaaaagtagaggggtac
catgcatattggcactcgggcgaaaaagagggatatgctggtgttgctatcctttctaaa
acaaaacccttggatgtcaaatttggcattgaaaagaccgaactcgataatgaaggtcgt
gtcatcacagctgaatacgagaagttttacctcgttaatgtttatgttccaaatgcaggt
caaggcttaaagtcccttccgaggcgtctagagtgggatccagctttccgtgcctatctg
aaaagcttggatgaaaagaaacctgttattttatgtggagatttgaatgtggctcataat
gaaatagatttagccaatcctaaaacaaacaccaaaagtgctggctttacacctcaagaa
agagaaggaatgacagaactgctgaagcaaggctttgttgatacttttagaagtttatat
cccgacaaaacaggtgcctacagtttttggacgtacatgagtaatgctcgttcgcggaat
gttggctggaggttggactacttcatcacctcggagagattcgtgccacaaatttgtgac
aatgtcattcggaatgaagtttttggaagtgaccattgtcccattaccttgtttgcaaat
gtgtaa
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