KEGG   Frankliniella occidentalis (western flower thrips): 113210440
Entry
113210440         CDS       T07591                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113210440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:foc03019]
    113210440
Messenger RNA biogenesis [BR:foc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     113210440
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_TEP1_2nd CSTF1_dimer Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_SCAP Beta-prop_HPS5 Ge1_WD40 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st RMC1_N Beta-prop_NWD2_C PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Tricorn_2nd Beta-prop_IFT140_2nd Beta-prop_RSE1_2nd Beta-prop_WDR11_1st Cytochrom_D1 VID27 WDR54 DUF7099
Other DBs
NCBI-GeneID: 113210440
NCBI-ProteinID: XP_026284222
UniProt: A0A6J1STM5
LinkDB
Position
Unknown
AA seq 455 aa
MAANSGPLPSGPGIPTVPLPPPDTLETKNVVKNRELLYRLMVSQLFYDGNQKQALEVQSV
TNPDPPCPPSDRLFNLMMLGLEYEMQRKRKKEGLTASISPDSFLGPGLDLEFETEMHTNA
AEPAMYETAYVTSHKGPCRAGAFSPDAQMVATGSQDASIKILDVSRMLAKSAPEAGMESS
GPESQGHPVIRTLYDHVEEVTCLEFHPREPILASGSRDYTVKLFDYSKTSVKKAFRTITD
ADQVKCLSFHPGGDFIVVGTNHSVIRLYDVQTAQAFVCNIPSHQHTSGITTIKYSPDAKV
FASGSRDGSIKIWDGVSNRCVNTFIKAHGGAEVCSVTFTRNGKYLLSTGKDSLVKLWELN
TSRCLIAYTGAGTTGKQEHKTQAVFNHTEDFVMFPDEATTSLCAWNSRNASRKHLLSLGH
NGPVRHISHSPTTAAFLTCSDDFRARFWSRRAPNH
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggcagcaaactcaggtccgctaccttcgggacctggcattccaacagtgccattacct
cctcctgacactttagaaaccaaaaatgtagtaaaaaatagagaacttctttatcgcctc
atggtcagccagctcttttatgacggcaaccaaaagcaggctcttgaagtgcaatctgtc
accaatcctgatccgccatgtccacccagcgatcgtcttttcaatttgatgatgttaggt
ttggaatacgaaatgcaaaggaaacgaaaaaaggaaggcttaactgcctccattagccct
gatagtttccttggaccaggcctcgatttggagtttgagacagagatgcataccaatgca
gcagaaccagctatgtacgaaacagcttacgttacttcacataaaggtccttgtcgagca
ggtgcatttagtccagacgcgcagatggttgcaactggaagtcaagatgcatctatcaag
atccttgatgtaagcagaatgttggctaaatctgcgcctgaggctggtatggaatcctct
ggaccagaatctcagggacatcctgttataagaactctctatgatcatgtagaggaggtt
acttgccttgagtttcaccctcgtgaacctattcttgcatctggttctagagattatact
gtaaagctttttgactacagcaaaacctctgtaaagaaagcattccgcactattactgat
gcagatcaggtgaaatgtctatctttccatccagggggtgatttcattgttgttggcaca
aaccatagcgtgataaggttatatgatgtgcaaactgctcaagcttttgtttgtaacatc
ccgagtcatcaacatacatcaggaatcactaccataaaatattcccctgacgcaaaagtt
tttgcatctggtagccgtgatggaagcatcaagatttgggatggtgtttctaatagatgt
gtcaatacttttattaaagctcatggtggagcagaggtgtgttctgtcacatttactcgc
aatggcaagtacctactctcaactggaaaagattccttagtcaaattgtgggagttaaat
actagccggtgtttgattgcctatactggagccgggaccacaggcaagcaagaacacaaa
actcaggctgtctttaaccatacagaggattttgtcatgttccctgatgaagcaactact
tcactatgtgcctggaattccagaaatgcgtcccgcaagcacctcttatctctaggtcat
aacggccctgtaagacatatttcacattctcctacaactgcggcattcctcacttgctct
gatgattttcgagcaaggttctggtcccggagagcaccaaatcattga

DBGET integrated database retrieval system