Frankliniella occidentalis (western flower thrips): 113210477
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Entry
113210477 CDS
T07591
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113210477
04131 Membrane trafficking [BR:
foc04131
]
113210477
03029 Mitochondrial biogenesis [BR:
foc03029
]
113210477
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113210477
Membrane trafficking [BR:
foc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113210477
Mitochondrial biogenesis [BR:
foc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113210477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EZ
HEAT_2
TOR1L1_N
GNC1_N
HEAT_ECM29
V-ATPase_H_C
Adaptin_N
TTI1
HEAT_EF3_N
UTP20
Motif
Other DBs
NCBI-GeneID:
113210477
NCBI-ProteinID:
XP_026284277
UniProt:
A0A6J1STT1
LinkDB
All DBs
Position
Unknown
AA seq
3031 aa
AA seq
DB search
MATLEKLMKSWDALKHLPVHITEEISPRRKEKIALCVTTADTFCSISGLKTGGVNIMVLS
FAVESLLQLCNDPDSDVRMTADESLNRIIRQAIMDSNVMKVQVELHKEIKRNGNARSLRA
ALWRFAYLSHMIRPQKGKPYVNNLMPCLMQISKRNEESVQETLATAMPQIFKALGLFTSD
KDVKELLKAFLQNLSSESAQVRRTAATCIVSICLNCRKPKVFLMETLNTLVDSVVPIKEN
QAVSEILGLLGCLRAVLPHFTNYDEEQTGQGELQGSFGVRRGHNRASYSIDYMIQVYELS
IYFSKHTDHNVVNASLELLHQLLTSPPTGLVSILLSPHGISRSQIVASPCEPSNIQRRSL
SQISVAGSIAPCDENSLLDLDSDLPTAMSDAVSAPLLEKWVQDGSGMSLETNKAISCTPK
ANVARLQLLDAADPCEPDLPPIPERDCVTSAGDVHSTDSSPDDVRETYLLECLEQEIEMN
KEITPPPSVSGISLSSPSPGAHRTEIKYQVCDIGSLTDGSIPLVYCARHLATSFLLTGHP
GYRMPDRNVRVSVKALALNCVAAIVKLHPNVFQLYLDKDPISPSRRSSTGGNSSQPLCEL
LLFTKHTDPQLRAICCALLAALVRSVLVQSGGNWQSWQRKADAKVAACLALPRLMQYLIQ
GLEDESSTTCRQTLVALSQCFSELLKSRDSQEIFPILPVLCRLAQNPYWLVKVKLLELVS
DLQYVVIHYVTGSSTFQDKIFHEVLLDLLKDDDNRVRHAAAEAIVRIIPNLFYPVDRHNV
NEVITAASDMSDAQLHKLLEDSEPLSSSTYGRSFQKIPRLDNLTPPFNAWNKAGPKAEEG
FSVQSALSRVVDTLSLLLLESSSKYLTMGCCETLSLLAERYSPATHMKSWNCIICTLSAP
KLSSKREFKRIFSDGSTGSSFSAASGLLQNVLSLLLTNPSTLELGAQQWLNTLTGNLFCG
VALANMHPVENPPPGVKLESNSHSNQLWSMFKDKQVSISAESLLLHVMRTLSIISHILED
SQPTASGNKPGLPSLSPIKRHGSSVGKTSTIPGDLSADVKSGRGMSPIKNIIHGEKEEKT
EERKSSKSSPFGSFVNNQHYVKLFELLRSSYTNYKTSLETDMCDKFVGLVSSTLKVLSQL
LEVMTLNEAGRIAEELLLYLRSTMSLSPAATVHCVSQLLKCVVGMNLVSFWDNFKSEDGP
LQQVPSVGNLNDKCSGYFSVSFQEPYRQLSQFLAAASATKSQNLETLHATILNKNLRHQS
DSKLACKMADTTFLASYIRLFEPMVIESLQQYTVTSDVQLQVKVLSLLTQLVQLRVNYCL
LDSEMVFIGFVQKQFEFIEEGQILNAEDLIMCIFHFMVLLSFEKHHSKSITSIPKVIQLC
DGLMASGQNPLTHCIPALLPVVEHGFISKASLSSGTIDAEELETQREVMVAMLLRLVEYH
QVMKLLSIVLVECRTWPEGEERWRRWSRQVCDAILGLLTCGRLKLDSCDAQKALHQLLLH
SLAPSVFMPVDPLLKVLFSPPPQSDSSIRSVIRWLGTILAVTLVLVAQGKEDATLARLEE
LEIVLPALFLRGNAVHLVSPDPLNVAAIATTPLTSSTPELTFARLVLRVIGLVGEKIDSI
VMDPASSPDLLKDCHYLEELLAHFLLVCIHMFQSGSHRKIGRAAVELVAGHATEDSLLLE
DANAVFLELASTCPLLMFLWCYLLTLLNYGNHAFWARVLPSIAKDSSKKDECKPCLTSNS
INVELVRTGAIIVYCDFMCENSCESEQLVWFLKSQMLNIVELSSEFPVQQLIAVLHRSPE
HSSLMLEAVKENFFPPNKAKPIIGLLKCLEGVHPSCRGSLLLLLAEHYVGHAHPAVARRA
AQLCTRQAEYLLTLPSAQVSEQLTREQLRDILHSFRHSCLDRKQSGLVSILNKLGSQCLA
LSPLESDQVRPLSPVSLQNLKLDKEWYLSQVRLRCSQASCTGVAVEESTHLLGRLDLEDA
VSVLSSPDTHLSILQLCFRHGTHQTLQASILLEHKRNIEDMLSPLYRASRMVLMQRVHHL
TELVPKDHQVFLPVGRPPTNAEQAYSQTLLKILANDLKIDSLFCIAAAVSSYVYSLDKLG
GVVPSEAAEDLVTFAILCLEAIHSQFSQSAERSTIKAERLRSDKKNKSLSVDTHDPPSAL
NFGRGTLISPMDKKFRAPQPHCLELGLACASRVLCEPTLGAILEHPKYSTRLASACSAIS
AIVHFATLGEPLPLISNDGLNEALSKPEALNIAHACHQISILVTWLEKHCFNRVCQNIPP
FLSAPIKKLIVQLSRTSPLNSYVLTPPEVWKHGWTVTLKGPYNTQVPPLPTEFLQDIDIL
RQFIFRVILLGWTSRQQFEETWMSLLSVLSADSSNENMPSEDVAIETEASSAVIEAITAL
LLQTLSLPTPGNPSVGQLMHCPRDISFQFTSNSPAGKLHAIQQILLWKEEGLHGKKHFSV
FDRPNLEHFVSLKRFRYGQVSVEYLQYALERSQDGVCKKQFSTSVIETFMKRYTALETSG
VDVNSCLYFLLDLCTQWTQPQLSGMSGSSRPLHEVLCSVLAVSDLFTEQSQWQWLLQTCL
ELTKSQPVEDDILQQYVILGQCKACAVLQPDIAVYDRIMRTLDMTLRSSFVPTVTASLHG
LIYMLQGCLLAERERDTEKPDGGDNDAILSGQEFPSSADPSLLETTRNVVILVAEYISKK
LVSNSNLSVNEEPNIILWSLAFHLLDNFSRCKIDALEQAVSIILPQAITFANPNSRISPT
LQRLILQGLERLVVSQSGALSVRTLDQITTLVVESIADPNPGVFFNYLQLLLSCMYMGHE
GQTMVSKTNTGISEIEKQLKPTDPEQLILAMEKTSALFDRIKKGYPQEVELVCSVLPNLL
TDFFPASEVLTKVVGEFLSQQQPHPRLLAGVVFQVFECAVAQSQLSLLQEWLVLSLSNFT
QTLPVPMATWCLTCFFISASCNPWLRALFPHVQSRIGRCEYEDRKLLCLSAADFYHQLTC
DIQKKKFLSTFQSAASKEPSSPYSEILSSLS
NT seq
9096 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctcgagaagctcatgaaatcatgggacgctttaaagcacttgcctgtccac
attaccgaagaaatctccccaagacgaaaagaaaaaatagccttatgtgttacaacagca
gacacattttgctccatatcagggctgaaaacaggaggtgtcaatataatggtgttaagt
tttgcagttgaatcattgttacaattgtgcaatgacccagactcagatgttcgcatgact
gctgatgagagtctcaaccggataatcaggcaagctattatggacagcaatgtaatgaaa
gtacaggtagaacttcacaaagaaatcaagcgtaatggaaatgctcgtagcttgagggct
gccctctggagatttgcgtacctcagtcacatgattaggccacaaaagggtaaaccatat
gtaaacaatttgatgccatgccttatgcagattagtaaaagaaacgaagaatctgtacaa
gaaactcttgccactgcaatgcctcaaatatttaaggcacttggtctttttacttctgac
aaagatgtgaaggaactcctgaaagcatttctccaaaatctgtcatcagaatcagcccaa
gttcggagaacagcagcaacttgtatagtgagcatatgtctgaattgccgcaaacctaaa
gtatttttaatggagactttaaatactcttgttgattctgtggttcctatcaaggaaaat
caagcagtttcagaaattcttggattgttaggctgcttaagagcagttttaccccatttt
actaattatgatgaggaacaaactgggcaaggcgaacttcaaggaagttttggtgttagg
agaggtcataatcgtgcttcatacagtatagattacatgattcaagtatatgaacttagc
atctatttctccaaacatactgatcataatgtagtcaatgcatctttggaactactgcat
caactccttacctcacctcctactggtcttgtgtcaattcttctttcgccacatggaatc
tctcggtcacaaattgtagcttctccttgtgaaccatctaacatacaacgccgttcccta
agtcagattagtgtggcaggttcaattgcaccttgcgatgaaaactctctattagatctt
gactcagatttaccaactgccatgtcagatgctgtatctgctcctttattagagaaatgg
gttcaagatgggtctggaatgtcactggaaacaaataaggccatttcttgtactccaaag
gcaaatgtggccaggctacaactcttagatgcagcagatccatgtgaacctgatttgccc
ccaattccagaaagggattgtgtaacttctgctggtgatgtacactccaccgactcctca
ccagatgatgttagagaaacttatttgcttgaatgtctagagcaggaaattgagatgaat
aaggaaatcactccacccccttctgtaagtggaatttcactatcaagtccatcaccaggt
gctcatcgaactgaaataaagtatcaggtgtgtgatattggatctttgacagatggctcc
attcctttagtttattgtgcacgccatcttgcaacctcctttctgttgactggtcacccg
ggctacagaatgcccgaccgcaatgttcgagttagtgttaaagcccttgctctcaattgt
gttgcggcaattgtaaaacttcatccgaatgtgttccaactttatttagacaaggatcct
atatctccttcacgtcgctcatcaacaggtgggaactcttcacagcccttgtgtgagctg
cttctgttcactaaacatacagacccccagctacgagcaatatgctgtgcacttctggca
gccttggtccgttcagttttggttcaatctgggggtaactggcaaagctggcaacgcaaa
gctgacgccaaggtagctgcttgcctggcccttccccggcttatgcagtatctcattcag
ggcttagaggatgagtcttcaactacatgccgtcaaactcttgtagctctatcgcaatgt
ttttctgagcttctcaagagtagggacagtcaggagattttcccaattttaccagttctc
tgtagactagcccaaaacccttattggcttgtaaaggtaaaactcttagagctagtcagt
gaccttcaatatgttgtgattcactatgtaactggttcatcaactttccaagacaaaatt
ttccatgaagtactgcttgacctcctgaaggatgatgacaatagagttcgtcacgctgct
gctgaagccattgtgagaatcattccaaatctcttttaccctgtggaccgtcataatgtt
aatgaagttataactgctgctagtgacatgagtgacgcacagcttcacaaattgttggag
gattcggaacctctatcatcatcaacttatggaagaagtttccaaaaaattcctcgtttg
gataatcttactccaccatttaatgcttggaataaagctggtcctaaggcagaagagggt
ttcagtgtacaatcagctctatcaagagttgttgatactctttcgcttttattactggag
tcatcatcaaaatatctgacaatgggatgctgtgaaacgctttctctattggcagagaga
tattctccagctacgcatatgaagagctggaattgtataatctgtactctttctgctcca
aaactaagttctaaacgtgaatttaagcgaatattcagtgatggttctactggaagcagc
ttttcagctgcaagtggtctgctgcaaaatgttttgtcacttttactgactaatccctcc
actcttgaactgggagcacaacagtggctgaatacccttacaggaaatttattttgtggt
gtagctttagcaaatatgcaccctgtagaaaacccacctcctggagtgaaattggaatct
aattctcattcaaatcaattatggtccatgtttaaggacaagcaggtcagcatttctgcg
gagtcacttctactccatgtaatgcgcacattaagtataatttcacatattcttgaggac
tctcaacccacagcatcaggcaataaacctggacttccctctctctctcccattaaacga
catggtagtagtgtaggaaaaacctcaacaattccaggtgatctgtcagcagatgttaag
agtgggcgaggaatgtcacccataaaaaatattattcacggtgaaaaggaagaaaaaact
gaggagagaaaaagcagtaagagttcgccatttggctcgtttgtaaacaatcagcattat
gtaaaactttttgagcttttacggtcatcttatacaaactacaagacatcccttgaaact
gatatgtgtgacaaatttgtgggactagtcagctcaactctcaaagttctttctcagctc
ttagaagtaatgactctcaatgaagcagggagaattgccgaagaacttttgttgtatttg
aggagtaccatgagcctgtcaccagctgctactgttcattgtgtcagtcagttgctcaaa
tgtgtggttggtatgaacttagtatctttttgggataattttaagtcagaagatggacct
cttcaacaagtacctagtgtagggaatcttaatgataaatgcagtggctatttttctgtg
agttttcaagagccgtacaggcaactcagtcaatttcttgctgctgcatctgctactaag
tcacaaaatttggagactttacatgctactatcttaaataaaaatcttcgccatcaaagt
gactccaaacttgcctgcaaaatggctgacacaactttccttgcatcatatattcgtctc
tttgagccaatggtcatagaatctcttcagcaatatactgttaccagtgatgtccagctg
caagttaaagtgttgtctttactaactcagcttgtccagctaagagtgaattattgtcta
cttgattctgaaatggtattcattggatttgtgcaaaaacaatttgagttcattgaagag
ggacaaattctaaatgcagaagaccttataatgtgcatattccattttatggtattactc
tcctttgaaaagcatcattccaagtccataaccagtataccaaaagttatacagctatgc
gatgggttaatggcaagtggacaaaatcctctaacacactgtattcctgcacttctacca
gtagtagagcatggtttcatatccaaggcatctttaagctctggaactattgacgctgag
gagctggaaactcagagagaagtaatggtagccatgttgttaagactagttgaataccac
caggttatgaaacttcttagcatcgtccttgtagaatgcagaacttggccggagggtgaa
gagcgctggagacgctggtctcgtcaagtgtgcgatgctattttaggtttattaacatgt
ggccgattaaaattggactcttgtgatgcccaaaaggcactccatcagttattgttgcat
agcttagcaccgagtgttttcatgccagttgatccactgctgaaagttcttttttctcct
cccccacaatctgatagttcaatacgttcagtcattaggtggcttggaactattttggca
gtcacattagttcttgttgctcaaggaaaggaggatgctactcttgctaggcttgaggaa
cttgagattgtcctaccagctctgtttttacgaggaaatgctgttcacttagttagccct
gatcccttaaatgttgctgcgattgctacaacacccctaacatcaagcacacctgaactt
acctttgcaagattggttttaagagtaataggacttgttggagaaaagatagatagtatt
gttatggatcctgcttcatctcctgacttgcttaaagactgtcactaccttgaagagctc
ttagcacactttttgctggtttgcattcacatgtttcaatcaggaagccacagaaaaatt
ggtcgtgctgctgttgagttggtggcaggacatgctactgaagacagtcttcttttagag
gatgcaaatgcagtattccttgagcttgcatctacctgtcctctcttaatgtttttgtgg
tgctacttactgactcttttgaactatggcaatcatgcattttgggcaagagttcttcca
tcaatagctaaagactcctctaaaaaagatgaatgtaagccatgtcttacaagtaacagt
ataaatgtggaacttgttcgtacaggtgccataattgtttactgtgattttatgtgtgag
aactcttgtgaatctgagcaattagtttggtttttaaaaagccaaatgttgaatattgtt
gagctaagttcagagtttccagttcaacaattaattgccgtcttgcatcgaagccctgaa
cacagtagtttgatgctggaggctgtaaaagaaaatttcttccctccaaataaggctaaa
cccattataggtcttttgaagtgcttggagggtgtacatccctcatgtagggggtctcta
ttactcctgcttgcagaacattatgttggtcatgcacatcctgcagtggctcgacgagct
gctcaactgtgtactcgtcaggctgagtacttactcactctaccatcagctcaagttagt
gagcagctcacacgagaacagttacgtgatatcttacattcatttcgccattcttgtttg
gacagaaagcaaagtggtttggtcagtatcctgaacaagctaggatcacagtgtttggca
ttatcacctcttgaatcagatcaagttcgtcctctctcacctgtgtcattacagaacctt
aaattagacaaagaatggtatctcagtcaggtcagattaagatgtagtcaagcatcttgt
actggagtcgcagtagaagagtcaactcacctccttggtcgtctcgaccttgaagatgct
gtgtctgttctgagtagcccagacactcacctttccattttacaactttgctttcgtcat
ggtacccatcagaccctccaggcttctattcttttggaacataagagaaatattgaagac
atgttatctcctttataccgtgcttctagaatggtgctcatgcaaagggttcaccatctg
actgaacttgtacctaaagaccatcaggtatttctgcctgttggacgtcctccaacaaat
gcagaacaggcatattcacagactctgttgaaaattttggcaaatgatttgaaaattgac
tctttgttctgcatagcagcagctgtaagcagttatgtttattcgcttgataaactgggc
ggagttgtaccatcggaagctgctgaggatctcgtgacttttgcaattctatgtttagag
gcaatacacagtcagttttctcaaagtgctgagcgatctactatcaaggctgagaggtta
aggtcagataagaaaaataaatctttgtctgttgatacacatgatcctcctagtgctttg
aattttggaagaggaactcttatttcaccaatggataaaaaattccgtgcccctcagcct
cactgtttggagctaggcttagcgtgtgcaagtcgggtgctctgtgaacctactcttggt
gctatattagagcatccaaagtattccacccggcttgcctctgcctgttctgcaatttct
gctattgttcactttgccacgctaggggagccacttcctcttatatccaatgatggatta
aatgaagctctttcaaaaccagaagctctaaatattgcacatgcttgtcatcaaatatcg
attcttgtcacatggcttgagaaacattgttttaaccgtgtatgccaaaatattccacct
tttctgtctgccccaattaaaaaactaattgttcaactatcaaggacatctcctttgaat
tcatatgtattgaccccccctgaagtatggaaacatggttggactgtcactcttaaaggc
ccttataacactcaagttcctcccttacccactgagtttttgcaagacattgatattctc
cgacagttcatatttagagtgattttgttaggctggacaagccgacagcagtttgaagag
acatggatgtctttattgagtgtattaagtgctgattcaagcaatgaaaatatgccgtct
gaagatgtagcaattgaaactgaagctagcagtgccgttatagaggcaattactgctctc
ctgctccagaccttatcattgcctacacctggtaatcccagtgttggtcagcttatgcac
tgtcccagagatatttcttttcagttcacttccaacagtccggctgggaaacttcatgct
attcagcagatccttctttggaaagaggaaggacttcatggcaagaaacatttctctgta
tttgatcggcccaacctagaacactttgtttctctaaagcggtttcgctatgggcaggtt
tctgtcgagtatctccagtatgctctagagagatctcaggacggtgtatgtaaaaagcaa
ttttctacttcagtcattgaaacatttatgaagaggtatacagctttagaaaccagtgga
gtagatgtcaattcttgtttatactttcttttggatttgtgtactcaatggactcaacct
cagctttcaggcatgtctggttctagtcgccctttacatgaagttttatgttcagtctta
gcagtttctgatttgttcactgaacagtcacaatggcaatggctacttcagacatgttta
gaactgacaaaaagtcagcctgtagaggatgatatattgcagcaatatgttattttaggt
caatgtaaagcctgtgctgttctccagcctgacattgctgtttatgatcgcatcatgcgc
acacttgacatgactctccgttcaagttttgtacctactgtaacagcctcacttcatggg
ctgatttacatgctgcaaggctgtctactggctgaacgagaaagagacactgagaaacct
gatggaggagacaatgatgcaattctgagtggacaagagtttccgtcttctgctgatcca
agtctgcttgagactactcgcaatgttgttatattagtagcagaatatattagcaaaaaa
ctagtgtctaattctaatttgagtgtgaatgaggagccaaacattattctttggtccttg
gcttttcatctattggataacttcagtcgatgtaagatcgatgcactagaacaagctgtt
tcaattattttacctcaagcaataacttttgctaatccgaatagtaggatatcaccgacc
cttcagcgtttaattctgcagggtcttgagagattggttgtctcacaatcaggggcactc
tcagtccgtaccctagatcagattacaactttggttgtagaaagcattgctgatcctaat
cctggagtgtttttcaattatttgcaacttctgttgtcttgcatgtatatggggcatgaa
ggacaaactatggtgagcaaaactaatactggaattagcgaaattgagaaacaattaaaa
cccaccgaccctgaacaacttattttggctatggagaaaacatcagctctttttgacaga
attaaaaaaggttatccccaagaagtggaattagtgtgttctgttctgcccaacctctta
actgacttcttcccagcctcagaagtattaaccaaagtagttggtgaatttctttcgcag
cagcaacctcatccaagacttctggcaggtgttgtttttcaggtttttgagtgtgctgtg
gcccagtcacagcttagccttttacaagagtggcttgttttgtcactatcaaattttaca
cagactctgccagttcctatggcaacttggtgcctcacctgttttttcataagtgcatcc
tgtaacccttggctacgagcacttttcccccatgtgcagtctcggattggacgatgtgaa
tatgaagatcgaaaacttctttgtctttctgctgctgacttttaccatcagctgacctgt
gatatccaaaagaaaaaatttctgtctacattccagtcagctgctagtaaggaacccagc
tccccatattcagaaattctctccagtttgagctag
DBGET
integrated database retrieval system
