Frankliniella occidentalis (western flower thrips): 113210571
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Entry
113210571 CDS
T07591
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04140
Autophagy - animal
foc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113210571
04148 Efferocytosis
113210571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113210571
Membrane trafficking [BR:
foc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113210571
Hops complex
113210571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
113210571
NCBI-ProteinID:
XP_026284415
UniProt:
A0A6J1SYI8
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MSVLLTADWCSVGRDEYYRKFEVYKWEDSFSMENVIMTSCSYGGPFAVRRDPKKLVQVQG
SGKPSVAIYTAAGAFVSSILLTKSVIEVGWSTTEDLLCIEDDGSVLRYDIFGNHQHTFSM
CDEARVTKVIEAKVFTCAGGTGVAILTSSYRFFLVNSVKEPKTRPMPEIPGLNAPPSSWG
VIVEDRQTKILVAKERELYLLSHNDSRPVPVVLEFSDRLSSVVEMAVSVDNRQIGLFTDK
GRLWIGSSDLRSKYCEIDTSHAYRPLQLAWCGSDGVLGVWDGTLLLVTKNGDTLTYPCDS
KVHVVAEIDCARVISSSSHEILQSVPSVVQKILRINSVDPGLYLLEASRQFQRRNHTADE
YIRLVKDNLPLAVENCIEAAGYEFSHDNQKMFIRAAQFGKGFVPDLDPENYVRMCRVLRV
LNAVRDHKVSLPITNTQLRKMNIVGLLERLIRRRHYYMAIQICKHLKLPPAEGSSRILAE
WAFYKVAQAKQDREQVAREIASKLGKAPGISYKDIALRANNCGHKHLAIRLMDYEPRARE
QVPLLLDLGEEVPALLKAMESGDTDLIYSVLLRMHAKMPLADFYLKIRNYPLAQSLYIKY
SYENNNKELHDIHDQESNYNAQAALHLKDAYLPKNSGTREASLAAARQSYKNARNDFLAG
ACDEQLRLLKIQRTLEDKFGREFFGQSLHDTVEILLTLKEVKVAESLRNEFKIPDRRYWW
LRILAHARNGEWKQLENFSKEKKSPIGYEPFVDVCFERNEREEAQKYMSRVRDDLKVKYY
VKIGMLKQAAQTAFDQKDTQALIAVQSKCGSAEQNVIEQINTFLTQLSSRK
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcctactaactgctgactggtgctccgtgggaagagatgagtattatcgcaaa
tttgaagtctacaaatgggaggatagctttagcatggaaaatgtaatcatgacatcatgc
tcttatggtggaccatttgctgtacgtcgagaccccaagaaacttgtccaagttcaaggc
agcggaaagcccagtgtagcaatttacactgctgctggtgcttttgtctcctctatcttg
ttaacaaaatctgttatcgaagttggatggtccactactgaggacctactctgcattgaa
gatgatgggtctgttttgagatatgacatttttggcaaccaccaacacacattttccatg
tgtgatgaagcaagagtcacaaaagtaatagaagccaaggtgtttacctgtgctggtgga
actggtgtagcaatattaacgtcatcctatagattttttcttgtgaatagtgtcaaagaa
ccaaaaactcgaccaatgcctgaaattccaggacttaatgcaccccccagcagttgggga
gttattgttgaagataggcagacaaaaattttggttgccaaagaaagagagctttatttg
ttatcacacaatgatagccgtcctgtgcctgttgtattggaattttctgatcgattgagt
tctgttgttgaaatggcagtttccgtggacaatcgtcagattggtctctttactgacaaa
ggtagattgtggattggttcatctgacttacggtcgaagtattgtgaaattgacacatcc
catgcttatagaccactgcaactagcatggtgtggctctgatggagttcttggtgtctgg
gatggaactcttctccttgttacaaaaaatggtgatacactgacatacccatgtgactca
aaagtgcatgtggtggcagaaattgattgtgcacgtgttatttcgagctcttctcatgag
attttgcagtcggttccatcagtagttcaaaagatcctgcgaatcaatagtgttgaccca
ggtttatatcttctggaggcatcacggcagtttcagcgccgaaatcacaccgcggatgaa
tatattcgtcttgttaaagacaatttgccattggctgttgaaaattgtatcgaagctgct
ggatatgaattttcacatgacaatcaaaagatgttcataagggctgctcagttcgggaaa
ggttttgttcctgatttagatccagaaaattatgttaggatgtgccgtgttcttcgtgtt
ctgaatgctgtccgtgatcacaaagtcagtcttcctatcaccaatacacagctaaggaaa
atgaatattgttggattacttgaaagacttattcgcagaagacattactatatggcaatt
caaatttgcaaacatttaaaactgccacctgctgaaggttcaagccgtatattagcagaa
tgggctttctataaggttgcacaagcaaaacaggaccgagaacaagtagcaagagaaatt
gcaagcaaacttggtaaagctcctggaatttcctacaaagacattgctctgagagctaat
aattgtggccacaaacatctggctattcggttgatggactatgaacctcgagccagagaa
caagtccccttgctccttgatctaggagaggaggttcctgccttactgaaagctatggaa
agtggagacactgatttaatatattcagtgcttcttagaatgcatgctaagatgccactg
gccgatttttatctgaaaattcggaactacccattggctcagtccctttacatcaaatac
agttatgagaacaataacaaagaacttcatgatattcatgaccaagaatcaaattataat
gcgcaagctgctctccatctcaaggatgcctatctacctaagaattctgggactcgagag
gcatcattagcagcagcacgtcagagctataaaaatgctagaaatgattttctggcaggt
gcttgtgatgagcaacttcgacttctaaagattcaaaggactttagaagataaatttggc
agggaattttttggacagtcacttcatgatacagttgaaatacttctgactttgaaagag
gtgaaagttgctgaaagtttacgcaatgagtttaaaattcctgatcgtaggtattggtgg
ttacgcatattagcccatgcccgcaacggagagtggaaacagcttgaaaacttttccaaa
gagaagaagtctccaattggatatgagccttttgttgatgtctgctttgaacgaaatgaa
agagaagaagcacagaagtatatgagcagagtgcgagatgatctaaaagtgaaatactat
gtaaagattggaatgttgaaacaggctgctcagactgcttttgaccagaaagatacccaa
gctcttattgccgtccaatcaaagtgtgggtccgcagaacagaatgtcattgaacaaatt
aacacattcctcactcaattaagcagtagaaaatag
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