Frankliniella occidentalis (western flower thrips): 113210703
Help
Entry
113210703 CDS
T07591
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03015
mRNA surveillance pathway
foc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113210703
09123 Folding, sorting and degradation
03018 RNA degradation
113210703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113210703
03041 Spliceosome [BR:
foc03041
]
113210703
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113210703
mRNA cycle factors
Stress granule specific factors
113210703
Spliceosome [BR:
foc03041
]
Complex C
Other components
Complex C specific factors
113210703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RBD_DEAH11
RRM_10
RBD_RDR6
POP1_C
Motif
Other DBs
NCBI-GeneID:
113210703
NCBI-ProteinID:
XP_026284593
UniProt:
A0A6J1SUN9
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MNPSGQNYQMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS
AFGNILSCRVAQDETGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVFVGKFIPRKER
EKELGEKAKLYTNVYIKNFPEDFSEEALKDMFEKYGVITSHKVMSRDDGKSRGFGFVAFE
DPESAERAVDELNGKDMDGKPLFVGRAQKKMERQTELKRKFEQLKIERLNRYQGVNLYVK
NLDDTIDDDRLRKEFAPFGTITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRILV
TKPLYVALAQRKEDRKAHLASQYMQRVANMRIQQMGQQIFQPSGAGGYFVPTIPQPQRFY
GPAQMPMRPQPRWTTQPQVRPNAQAQQAAFPNMPGPYRGGPRPPSAQPGPGGMGRAMSAR
PITNQQAAGMAQGARGPMGSAPAVVPQSAQQAPAQAAQAAQRAGQFKYTANVRNPAQPGM
GPQQGAAQQAVHIQGQEPLTATMLAVANPDDQKQMLGERLFPLIQRMYPDLAGKITGMLL
EIDNSELLHMLEHHESLKAKVEEAVAVLQAHQAKQAIKKD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgagtggccaaaattatcaaatggcctcgctgtacgtcggggacttgcacccc
gacgttactgaggccatgttgtttgagaagttttcctctgctggaccggtgctttccatt
cgtgtctgtcgtgacatgatcacccgtcgatccctgggttacgcctatgtgaattttcaa
caaccggccgacgctgagcgagccctggataccatgaacttcgatgtactgaagggcaga
cccatccgtatcatgtggtctcaacgagatccgtctctgcgtaagtctggcgttggaaat
gtctttatcaagaaccttgacaagagtattgacaacaaggccatgtacgataccttttct
gcttttggtaacatcttgagctgtcgagttgcccaagacgagactggtgcctccaaaggc
tatggttttgttcactttgagactgaggaagccgctaataaatctattgacaaggtcaac
ggaatgttgctgaacggcaagaaggtcttcgttggcaagttcatcccccgcaaggagcgc
gaaaaggaattgggcgagaaggccaagctgtacaccaatgtgtacatcaagaacttccct
gaagatttctcagaggaagccctgaaagacatgtttgagaagtatggagttattactagc
cacaaagtcatgagccgcgatgatggtaaatctcgtggctttggatttgttgcctttgaa
gatcctgaaagtgctgagagagctgttgatgaactcaatggaaaagacatggatggcaag
cctctctttgttggccgcgcacagaagaaaatggagagacaaaccgaactgaaacgcaag
ttcgagcaactgaagattgaaaggctcaaccgctaccagggtgtgaatttgtatgtgaag
aaccttgacgacaccattgatgatgacagacttcgcaaggaatttgcgccatttggaaca
attaccagtgccaaggtcatgctggaggaggggcgttccaagggattcgggtttgtgtgt
ttctcctcacctgaggaggcaaccaaggctgtgactgagatgaatggtcgtattctggtg
accaagcccctctatgtggctcttgcccaaaggaaagaggaccgcaaggctcatttggct
tcccagtacatgcagcgcgttgccaacatgcgcatccagcagatgggtcagcaaatcttc
cagcccagcggtgcgggcggttatttcgtacctaccatccctcaacctcaacgcttctac
ggcccggcccagatgcccatgcgccctcaaccccgctggaccacccaacctcaagtccgc
cccaatgcccaagcccaacaagcagccttccccaacatgcctggcccttaccgcggcggc
ccccgccctccaagtgctcaacccggacccggcggcatgggccgagctatgtctgcccga
cccatcaccaaccagcaggcggccggcatggcccagggtgcccgcggccccatgggatcc
gcccccgctgttgtgccccagtcggcccaacaggcccccgcccaagctgcgcaggctgct
cagcgcgccggccagttcaagtacaccgccaacgtgcgtaaccctgcccaacctggcatg
ggccctcagcaaggtgccgcccagcaggctgtgcacatccagggccaggagcctctgacc
gccaccatgttggctgtggccaatcccgacgaccagaagcagatgcttggagagcgtctc
ttcccactcattcagcgcatgtatcctgacttagctggcaaaatcactggaatgttgctg
gaaattgataactcagagctacttcacatgctggagcaccatgaatccctgaaggccaag
gttgaagaagcagttgctgtccttcaggctcaccaggccaaacaggctatcaagaaagat
taa
DBGET
integrated database retrieval system
