KEGG   Frankliniella occidentalis (western flower thrips): 113210844
Entry
113210844         CDS       T07591                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03013  Nucleocytoplasmic transport
foc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113210844
  09122 Translation
   03013 Nucleocytoplasmic transport
    113210844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:foc03019]
    113210844
   03041 Spliceosome [BR:foc03041]
    113210844
Messenger RNA biogenesis [BR:foc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113210844
Spliceosome [BR:foc03041]
 Complex C
  Other components
   EJC/TREX
    113210844
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113210844
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_EML RMC1_N eIF2A Beta-prop_WDR36-Utp21_1st DSE1_N Tricorn_2nd Beta-prop_HPS5 Beta-prop_SCAP WD40_MABP1-WDR62_1st PAC11 CFAP251_N NBCH_WD40 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_TEP1_C TRM82_WD ASA1 Beta-prop_DCAF12 Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_Nup120_160 PD40 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 113210844
NCBI-ProteinID: XP_026284799
UniProt: A0A6J1SU46
LinkDB
Position
Unknown
AA seq 322 aa
MSSFGSEIERLRQHFKSHSKVKEYQAHSAKVHSVGWSCDGRRLASGSFDKTVSIFTFDRE
RLGKDFTFRGHSGSVDQLCWHASNPDLLATASGDKSARIWDARTQKCAATINTKGENINI
TWAPDGQTIAVGNKEDLVTFIDARTHKVKSEQQFDFEVNEISWNKTSDLFFLTNGQGCIY
ILGYPELELQHVLKAHPGTCICIEFDPTGRYFATGSADTLVSLWDVEELACLRTFSRLDW
PVRTITFSHDGKLLASASEDLLIDIGEVETGLKVCDIPVEAATFTVAWHPSQYLLAFACD
DKDTYDRKHDAGILKVYGFSSD
NT seq 969 nt   +upstreamnt  +downstreamnt
atgagttcgtttggaagtgaaattgaacggcttcgtcagcattttaaatcccacagtaaa
gtaaaggagtaccaggcacattccgcgaaagttcattcggtcggatggagctgcgatggg
cgaagactcgcctcaggttcctttgacaaaacagtgtccatctttactttcgacagggag
cgactgggtaaggatttcacattccgtggccatagtgggagtgttgatcaactttgttgg
catgcttcaaatcccgaccttcttgctactgccagtggagataaaagtgccagaatttgg
gatgccagaacccagaagtgtgctgcaaccatcaacaccaaaggagagaatatcaatata
acttgggcacctgatggtcaaacaatagctgttggtaacaaggaagacttggtaacattt
attgatgctcgtactcacaaagtaaaatccgaacagcaattcgactttgaagtcaacgaa
atatcctggaataaaacaagtgacctgtttttcttaactaatggtcaaggatgtatttat
atattaggctaccccgaattagaattacagcatgtattgaaagctcatcctggaacttgt
atatgcattgaatttgaccccacaggaagatattttgccacaggctctgctgacacatta
gtgtctttgtgggatgttgaagaacttgcttgtttaagaacgttctctaggttggattgg
cctgtgagaacaataacatttagccatgatggaaaactgcttgcttcagcatcggaggac
ttattgattgatattggtgaggttgaaacaggtcttaaggtttgtgacataccagtagag
gccgctacattcactgttgcttggcatccgagtcaataccttttagcttttgcttgtgac
gacaaggatacctatgataggaaacatgatgcaggaatactgaaagtatatggattttcc
tctgattga

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