Frankliniella occidentalis (western flower thrips): 113211161
Help
Entry
113211161 CDS
T07591
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04140
Autophagy - animal
foc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113211161
04148 Efferocytosis
113211161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113211161
Membrane trafficking [BR:
foc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
113211161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_Prp19
zf-RING_Vps41
Beta-prop_HPS5
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
zf_RING_Vps8_fungal
Beta-prop_EML_2
TPR_7
TPR_PEP5_VPS11
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8
Beta-prop_CAF1B_HIR1
Vps39_1
Motif
Other DBs
NCBI-GeneID:
113211161
NCBI-ProteinID:
XP_026285245
UniProt:
A0A6J1T3L3
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MSSRGDTNDMANNTANESKTDESGEDSDDSEESEPKLKYIRMKNSLDNIFLKYAAKCISV
HPKFVCLGNNWGMVHLLDHLGNTVLEELRLHSTDVNQISIDSNGDFIASCSDDGRVFIQG
LYSSDNNQELRKENCKVKSVAIDPNYYKPGSGRRFITGDEQLVLYEKTFLTRLKSTVLCK
AQGLVHNIKWNGPFVAWADNLGVWVFDIEARRSLGLIKWPRNPEALPENYRCNICWKDSS
TFLVGWVDCVRICHIRKKTPHEIAIDRDKPDFIVDLVSAFETDFYISGIGPLDEQLVILG
YAKEPDEDGKAQRPVMYVVQPEANSFVELRYDSLSLRGYQHLKCNEYHLESLIEENNFFI
VSPKDVVVASPYDTDDRVQWLMEHSKFETAMEVVAQTEARQTRRYTFFQVGQAYLNHLLE
QREFQQAGELCQKILGTEKRLWESEVFKFARIHQLRAVSPYLPRGDYRLDSTIYEMVLYE
FLKLDAKGFLDVLKEWSPDLYNVKAVTAALCEHCVQNEADTILLEALAILYSHDKQYDKA
LAVYLKLKNTDLFQLIRKHNLYGVIHDMIEDLVKLDEEQAIALFLEKGDDTPDMKRFQNT
SVPAAPKLDKHLKKYLVDPGVVVAKLEKNPKYQYKYLDALDRRDAKGAGQKYHGLLVKLY
ADYARDKLLPLLHRSGHYPIQEALNICKERNYYSETVYLLGRIGNFKEALNLIMKELGDI
DQAINFCKEHHDIELWEDLISYSLSKADFITFLLQRIGTYVDPRILVQRIECGMEIPGLK
NSLVKLMRDYSLQVSVQEGCRKILSSDNFNLHDRLVKMQQRGIMVDDDQVCGKCNRSIIV
KDASRASNVVVFFCKHSFHGECAAEYCIICNAHKTKSPF
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcgtggagatacaaatgacatggcgaacaacactgcaaatgagtctaaaacc
gacgaaagtggagaagattcagatgactcagaagagtcagaacctaagttaaaatatatc
cgaatgaaaaactctctagataatatttttctcaaatatgctgccaagtgcatctctgtc
catcctaaatttgtgtgcttgggaaataactggggtatggttcatttgctagatcacttg
ggtaacacagtgcttgaagaacttcgcttacatagtactgacgtcaaccaaataagtatt
gatagcaatggagactttatcgctagctgctctgacgatgggagggtctttattcaaggc
ttatattcgtcagacaacaatcaggaattgagaaaagaaaattgtaaagtaaaatctgta
gccattgaccccaactattacaagcccggatctggtcggagatttattacaggtgatgaa
cagttagtgttgtatgagaagacctttcttacaagattaaagtcaactgtattgtgtaag
gctcaaggattagtgcacaacatcaagtggaatggcccatttgttgcatgggctgacaac
ttgggtgtttgggtctttgatatagaagccagacgttcattagggctaatcaaatggcca
agaaacccagaagctcttccggaaaactaccgttgcaacatatgttggaaagacagttcc
acttttttagtcggatgggttgattgtgtgcgtatctgccacatccggaagaagactccc
catgaaattgccattgatagagacaaacctgactttattgttgaccttgtgtcggcattt
gaaacagatttctatatatcaggcattggtcctttagatgaacaacttgttatattgggt
tatgctaaagaacctgatgaggatggtaaagcccaacgtcctgttatgtatgttgttcaa
cctgaagcaaacagctttgttgaactacgttatgactcactatctcttcgaggatatcag
cacctcaaatgcaatgaatatcacctagaaagtttgatagaagagaacaattttttcatt
gtgagtcccaaggatgtcgtcgttgccagtccatatgatactgatgacagagttcaatgg
ctaatggaacatagcaaatttgaaacagcaatggaagtagtagctcaaacagaagctcgg
caaactagaagatacacattttttcaagttggacaggcttatcttaaccatctcctggaa
caaagggaatttcagcaggctggtgaactttgtcaaaaaatccttggaactgaaaagaga
ttgtgggaaagtgaagtattcaaatttgctcgtattcaccagttacgagctgttagtcct
tacttacctcgtggtgactatcggcttgattctactatctatgaaatggttctttatgaa
ttcctaaagcttgatgcaaaaggattccttgatgttcttaaagagtggtcacctgatctc
tataatgttaaagcagttacagctgcattatgtgaacattgtgttcaaaatgaagctgat
acaattcttctggaagctcttgcaatactttatagtcacgacaagcagtacgacaaagca
ctggcagtatatttaaagcttaaaaatactgatttgtttcaactgattcgcaagcacaac
ctgtatggtgttattcatgatatgatagaagatttggtgaagttggacgaagagcaagcc
attgctttatttcttgaaaaaggtgatgatactccagacatgaaaaggttccagaataca
tcagttcctgctgcaccaaagcttgataagcatttaaaaaagtatcttgttgatcctggt
gttgttgttgccaaattagagaaaaatccaaagtatcaatacaaatatttagatgcattg
gacaggagagacgccaaaggggcagggcagaaataccacggattactcgttaaattatat
gcagactatgctcgggacaagttactccctctgcttcatcgatcggggcattatccaatt
caagaggctcttaacatatgcaaagaacgaaattattacagtgaaactgtgtacctttta
ggtcgtattggcaacttcaaagaggcactcaacctaataatgaaagagcttggtgatata
gatcaagcaatcaatttttgcaaagagcatcatgacattgaactttgggaagatctgata
agctattcactgtctaaagcagatttcattacattccttcttcagcgtattggcacatat
gtggatccccgcattttggttcagagaatagagtgtggaatggagattccaggtctgaaa
aattctctcgtaaagctgatgcgtgactatagtttgcaggtttctgtacaagaggggtgc
agaaaaattttgtcttctgacaactttaacttgcatgatagattagtaaagatgcagcag
cgaggaattatggttgatgatgaccaagtttgtggcaaatgtaaccgctccataattgtt
aaagatgcaagtcgagcaagtaatgtggtggtgtttttctgcaagcattcgtttcatggc
gagtgtgctgcagaatattgcatcatatgtaatgctcacaaaacaaagtcacctttttaa
DBGET
integrated database retrieval system
