Frankliniella occidentalis (western flower thrips): 113211313
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Entry
113211313 CDS
T07591
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113211313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
foc03041
]
113211313
Spliceosome [BR:
foc03041
]
Complex B
Other components
Prp19-related factors
113211313
Complex C
113211313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_YTH1
zf-CCCH_2
RRM_occluded
Nup35_RRM_2
zf-CCCH
zf-CCCH_4
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
113211313
NCBI-ProteinID:
XP_026285437
UniProt:
A0A6J1SX37
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MATSKSTSTYNRQNWEDAEFPILCQTCLGDNPYIRMTKDKYGKECKICSRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALRIKDDLPRSEVNKEYYIQN
MDREGGKLDPTSATGAVGKSQAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGTNDPVADKLMRRADSMPKLEPPEDRSITTLYIGNLG
EKLGEKELRDHFYQYGEIRAITVVSRQQCAFVQFTQRQPAEIAAERTFNKLILGGRRLTI
KWGRSQGRQGGEGGEQGDGEDMLEPVPGLPGTLPPPPTDMRNNFFNLAAPAAAAAAAAAA
SSSDGMMQPMMIPPPPMVPMGRPPPGIVPPGPPPLMRPPPVAAAGATTPFYFPQVMRPPP
GVRPPHPPPMFPPGTAPMYPRSVTNPAPLAPPGTGTIHYPSQDPSRMGTAQLGSKD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccaaatccacaagcacttacaacagacaaaattgggaagatgcggaattc
ccaattctttgccagacctgtctgggtgacaacccctacattcggatgacaaaagacaag
tatgggaaggaatgcaaaatttgctctcgtccattcactgtattccgctggtgtcctggt
gccaggatgcgttttaagaagacagaagtttgccagacatgcagtcgtttaaagaatgtg
tgtcagacatgcttgcttgatttggagtatggattgcctattcaggtccgggatgccgct
ctccgcatcaaagatgaccttcctcggtcagaagtcaataaagaatactacattcagaat
atggacagagagggtggtaaattggatccaacttctgctactggtgcagtaggaaaatca
caagcagctagtgatctattaatgaagttggcacgtaccagcccatactacaaacgtaac
agaccacacatctgttcattttgggtcaaaggcgagtgtaaaagaggtgaagaatgtcca
tatcggcatgagaagccgactgatccagacgacccacttgcagatcaaaatattaaggac
aggtattatggtaccaatgatcctgttgctgacaagttgatgcgacgtgctgactcaatg
cccaaactggaacccccagaagacaggagcattaccactctttatattggtaatttagga
gaaaaactgggcgaaaaggagttgagggatcacttttaccagtatggtgaaatccgagcc
atcactgttgtcagtcgccagcagtgtgcatttgtgcaatttactcaacgtcaacctgca
gagattgcagctgaaaggactttcaacaaacttattcttggtggtagaaggctcaccatc
aaatggggccggtcacaaggtcgccagggaggtgagggcggtgagcagggcgacggtgag
gacatgttggagcctgtgccaggacttccgggcacgcttccgccgccaccaacagacatg
cgcaacaatttcttcaacctggctgctcccgcggccgctgcggctgccgccgccgctgcc
tcctcctccgatggcatgatgcagcctatgatgattccgccgcctccaatggtccccatg
ggccggccaccgccggggattgtacctccagggccgccgccgctcatgcggcccccgccc
gtcgcagcggcaggcgccacaacgccgttctacttccctcaggtcatgaggccacctcct
ggcgtacgcccgccccatccgccacccatgttcccgcctggaaccgcacccatgtacccc
aggtctgtgacgaaccctgcgccactggcgccaccaggaacaggtaccattcactaccct
tcgcaggatccttcgagaatgggaactgcgcagttgggcagcaaggattaa
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