Frankliniella occidentalis (western flower thrips): 113211390
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Entry
113211390 CDS
T07591
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113211390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113211390
Membrane trafficking [BR:
foc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113211390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8
Beta-prop_EML_2
zf-RING_Vps41
Beta-prop_WDR5
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8_fungal
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_2
WDR55
Clathrin
Beta-prop_WDR3_1st
zf-RING_5
zf-rbx1
TPR_VPS8_2
Beta-prop_THOC3
Beta-prop_LRRK2
zf-C3H2C3
Beta-prop_IP5PC_F
Beta-prop_EML
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
113211390
NCBI-ProteinID:
XP_052128558
UniProt:
A0A9C6X3M9
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MADSVSVGSDIPENISIDTLNTELEELDDNEYDIPPVEHAPTLESILNDVDDRGSISEDE
VSGNHLIHPGEAFETWSMGSIGGRSRSSSERHSTTRSSSSRAPSNAIPVKAGSILRHVIL
KAISSQVVSASDRSDAGLPTCIAVQIMVAVGTSHGLVLVFDSSQTLRWCLDSQDKDQGSV
SALCFNYEVTRLLVGYARGHILMYDVKTGKLLRTMTDVHAPGTAVLHVKFTDNPNLALCS
DSGGSVFELTFKRTMGVRGCSSKCLFSGSRGEVCTIEPLLLDSVPGHPLHGTVLVAMATL
SKIIVVSIRPRMKVLFTFPLKAHPATLPLVSWQFVIIQVGEQSRVVDPVLAFARESTVHF
YQVTLDMASKIRLIPLQKLCVPYLLLSLHWLNPRTLATVDTLEQVHLIDVRSQIELEVVD
ISNAGLVYGSSHFKGLSTGGNVSKALALAGERACYNSLLSFGNQMVILGTRGLHVLGVRT
WKERLDHLIRQKNYLDALALALAFYQDRAKAVVGLKGPKCKRRALTRDKAIDILYKYIEY
GIGQAPSATEHLYREAVPACVLYSIELNEQDILFNQLWEVVSLYPVSKAIYLEALEPYLL
NEQLTEIPPQIVQDFVQHYCNNKKLLALEACVVHIPVTSLDFHQVMSICWEHGLYDAIIH
LYTKGMQDYVNPLQELLHVLQNAIATGRQLSNQQITLGNKLLVYISCCLAGRGYPYGDVP
PDLVQTVKQRVFQCVTCQHSLNAKDTEPVYPYLRVLLQFDTKEFLNVLALAFEEPEFTSE
LGLRRKQLVVDILLQLVVKEQGFSASQVGALLTFLARQLAQNGPSDRLHVDISLFERVVD
HLTEPGAVGSQKEEREQALLELMQAGGLSQFDPEDLLRKSEEAKFYRVEELLLLERGDVH
LVVDCYLQDHPRRMQVFQFLFSELSTSPEIDKSMHTLLLNTVEKKLKDLVAIDATQTGQL
IHQYLHPKLYEIIDKLNNDPSAQYAILQGLFLYYNQNLSREEPSPEPVLAEKYIELLCQH
CPENLCDFLQTNQWYRLDEALNTSKRFNQDEATALLLERSGDFLGAFSMLLNRLEPYIAK
LDAENTVSIQKINTITVELVRLSKKGSVALDVSTRQDNLWFPLLRSLLKAHIDHKTEIRP
LLQQVLNSMSPYVNLPEVIQIILQDPAYRGGTFGEIRDLMMGMLGNCWYEELLLQSTFRL
LSADLHMQLAKELAVNNKGFGPRASAAVRNSPICSYCRDSLATVGASEDEKAILFRCGHS
YHMRCIEEPPQCLKCVT
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctgtgtccgttgggagtgatattcccgaaaatatatctattgacacatta
aatactgagcttgaggagctcgatgataatgaatatgatataccccctgttgaacatgca
ccaactctggaaagtattcttaatgatgttgatgacagaggctctatcagtgaagatgaa
gtgtctgggaatcacctaattcatccaggagaagcttttgaaacctggtctatgggcagc
ataggcggacgaagtagaagttcttcagaacgccatagtacaactagatcctcatcatca
agagcccccagtaatgccattcctgtcaaagccggatctattcttcggcatgttattcta
aaggctatatcatctcaagtggtttctgcaagtgatcgctcagatgcaggtttgcccaca
tgtatagcagtgcagatcatggttgctgttggcacgtctcatgggcttgtccttgtgttt
gactcttcacaaactctgagatggtgtcttgatagccaggacaaagaccaaggctctgtt
tcagcattgtgttttaattatgaagttactaggttacttgttggttatgcaaggggccat
attcttatgtatgatgtaaaaacaggaaaactgttacgcacaatgacagatgtacacgca
cctgggacagcagtgctacatgtcaagttcacagacaatccaaatttagccctctgcagt
gatagtggtggatctgtatttgaactcacttttaaacgtaccatgggggtgagaggctgc
tcctccaaatgtttgttctcaggtagcaggggtgaagtgtgcaccattgaaccattgtta
cttgattctgtacctggccatcctttgcatggtacagttcttgtagctatggctacactt
tcaaagataattgttgttagtatccgtccaagaatgaaggtgttgtttaccttcccactc
aaggcacatccagctactttacccctagtatcgtggcagtttgtcattattcaagttggt
gaacaatcaagagttgttgatcctgttcttgcatttgctagggaatctactgttcatttt
tatcaggttactttagatatggcaagtaaaatcaggttgattcctctccaaaaactatgt
gttccatacttgcttctgtctttacattggttgaatccaaggactttagcgactgtagac
acactagagcaagttcatcttatagatgttcgatctcaaattgagctagaggttgtagat
atatctaatgctggattagtatatggatcgagtcactttaagggcttgtctactggtggc
aatgttagcaaagcattggctctcgctggagagcgagcatgttataattcactactcagt
tttggtaatcagatggtcattctgggtactagaggtcttcatgttttaggagttcgcacc
tggaaagagcggttggatcatttgatacgacagaaaaactacctggatgctttggcatta
gccttggctttttatcaagacagagctaaagctgtggtcggattgaaaggacccaaatgc
aaacgcagggctctcactcgtgataaggctatcgatattctctataaatatatcgagtat
ggtattggtcaggcacccagtgccactgagcatctgtaccgtgaagcagtacctgcttgt
gtattgtacagcattgaattgaatgagcaagatatactctttaaccaactttgggaggtt
gtctcactttatcctgtttcaaaagctatttatttagaagcgttggagccctacttatta
aacgaacaacttacagaaataccaccacaaattgttcaggactttgttcagcactattgt
aataataaaaaacttttggctcttgaggcatgtgttgtgcatatccctgtgacatcccta
gactttcatcaagtgatgtctatatgttgggaacatggcttgtatgatgctatcatacat
ctttacaccaaaggaatgcaagattatgttaaccctttgcaagaacttttgcatgttcta
cagaatgcaattgctacggggaggcagctttcaaatcaacaaataactttaggaaataaa
cttttagtttatataagctgctgcttggctggaagaggctacccctatggggatgttcca
ccagacttggtgcaaactgtgaaacaaagggtctttcagtgtgtcacttgtcagcatagc
ttaaatgccaaagatactgaaccagtctacccctatttaagggtcctactccagtttgac
accaaggagttcttgaatgtgttagctctggcctttgaagaaccagaattcacatctgag
cttggtctacgaagaaaacaattagttgtagacattctccttcaactggtggtgaaggag
caaggatttagtgcaagccaggttggagctttactgacctttttagctcgccagttggct
caaaatggaccctctgatcgattgcatgtagatatttctttatttgagcgggttgtcgat
catctgacagagcctggggctgtgggttcccagaaagaagagagggaacaagctcttctt
gaactcatgcaggctggaggtttgagtcaatttgatccagaagatctgctgaggaaatca
gaggaagcaaagttttaccgtgtagaagaacttttgctactagagcgaggagatgttcat
ttagtagtagattgctaccttcaagatcatccaaggcgcatgcaagtgttccaattttta
ttttctgagttgtctacctcccccgagattgataaaagcatgcacactttgctgctgaac
acagttgagaaaaaactaaaggatctagttgctattgatgctacacaaaccggccagttg
atccatcagtatttgcatcctaaactttatgaaattattgacaagctcaataatgatccc
tcagcacagtatgctatacttcaaggcctatttctgtattacaaccagaatcttagtcga
gaggagccttcgccagagccagttcttgcggaaaagtatattgagttattatgtcaacac
tgtccagagaatctatgtgacttccttcagacaaatcagtggtatcgacttgatgaagca
ttgaatacatcaaaaagattcaatcaagatgaagcaactgctcttttattggagagatca
ggtgactttttgggagccttttctatgctcttgaatcggttggaaccatatatagcaaag
ttggatgctgaaaatacagtgtcaattcaaaagataaacacaataactgttgagttagtg
cgacttagcaagaaaggatccgttgcattggatgtttcaaccaggcaagacaatctatgg
tttcctttgttgagaagtttgcttaaagcacacatagatcataaaacagaaatacgacct
ctacttcagcaagttttgaacagtatgagcccttatgtgaatttaccagaagtaatacaa
attattcttcaagacccagcatatcgtggtgggacttttggtgaaatccgagatctgatg
atggggatgctgggtaactgttggtatgaagagttgctacttcagtccacatttcgacta
ctgagtgctgatttgcatatgcagttagcaaaagaactcgcagtcaacaataaagggttc
ggcccgagagcttcggcagctgttcgtaattcccctatttgcagttattgtcgtgactct
ttagcaactgttggggctagtgaggatgagaaagccattcttttcaggtgtggtcactcc
taccatatgaggtgtatagaggaacctccacagtgcctgaaatgtgttacttga
DBGET
integrated database retrieval system
