Frankliniella occidentalis (western flower thrips): 113211497
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Entry
113211497 CDS
T07591
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113211497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113211497
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113211497
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113211497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
113211497
NCBI-ProteinID:
XP_026285663
UniProt:
A0A6J1SXK8
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MDQETLVCVPGQRLSIADKNHLSGRGTYERLGYIYATLAGVVKIEKQDKASLIEVRSSNE
QSIVPAPGDIVTAKVTIVKQRFCKCIIKCIGDTVLSRPYRGILRKEDVRATEKDKVEMIK
CFRPGDIILARVLPMTEVHSYQLSTAEDELGVVIADSETGTSMVPISWTEMQCPKTHIKE
LRKVAKVIPERLGSHIVI
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagaaactctcgtttgtgttccaggacaacgcttgagcatcgctgacaagaat
catttatcaggccgagggacttacgaacgcttgggatacatctatgccacattagctgga
gttgtaaagatagaaaaacaagacaaggcatcgctaattgaagtacgtagcagtaatgaa
caaagtatagttcctgctccaggtgatatcgtcactgcaaaggtaaccattgtgaaacag
aggttttgtaaatgtatcataaagtgtataggtgatacagttctctctcggccataccgt
ggcattttacgtaaagaagatgtacgtgcaactgaaaaagataaagtggaaatgatcaaa
tgttttcgtccaggagatattattctggctcgagttttaccaatgacagaagtacattca
tatcaactgtccacagctgaagatgagttaggagttgtaatagctgatagtgaaaccgga
acttcaatggtacccatcagttggaccgagatgcagtgtcctaagacacacattaaggaa
ttaagaaaagttgccaaagttatacctgagagattaggttctcatattgtcatttag
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integrated database retrieval system
