Frankliniella occidentalis (western flower thrips): 113212016
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Entry
113212016 CDS
T07591
Name
(RefSeq) RNA-binding protein Pasilla isoform X1
KO
K14944
RNA-binding protein Nova
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
foc03041
]
113212016
Spliceosome [BR:
foc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113212016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
113212016
NCBI-ProteinID:
XP_026286361
UniProt:
A0A6J1T6U6
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MWYAVQSKMAADSGMETCPSPDNPENKKRPWDGNDENGTTKRSHYGAGGSNDGMYHFKIL
VPSVAAGAIIGIGGETIGQLQKDTKARVKMSKAGDFYPGTAERVCLISGNAESIMEVLSF
IMEKIRDRPDFSKPTPNHTPIQNDSFDNKISQEREKQVKILVPNSTAGMIIGKGGSYIKQ
IKEESGSYVQISQKAKDVSLQERCITVIGELEQNQKACLMILQKVMEDSLSGTCLNVSYA
DIAGPVANFNPRGSPYAITAHTPSQPGTLQSGFNSTTSLNSIASGNALGNGINLSLNLSA
PNSATGSALTTQLLEHIKVTLRSSGYSDLATNEIISSMAVLARYGILGMGLGLAGTAPVQ
HRTAATGLPAGSYLGVPMDSTPAQVPSLASGRDTGVFGPIGTITGLGPAGGCASTPRNSV
KERFGDASDVGGFDMFLRNPAHSALSTSLNNNSFGLGTSGQSLEHSPTPADPKDGRKVDI
EIPELIVGAILGFGGRSLVEIQHLSGASIQISKKGQYAPGTRNRIVTISGLPNAIQTAQY
LIEQRVSEEEAKRARQNTIGGLLVN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtggtatgcagtgcaatccaagatggcggcggattcgggaatggagacgtgtccgtcc
ccagataatccggaaaacaagaaaagaccgtgggacggaaacgatgaaaatgggacgacg
aagagatcgcactacggcgcaggcggaagcaacgatggaatgtaccacttcaaaattctt
gtcccgagtgtggcagccggtgcaattattggcatcggtggtgaaaccattgggcagcta
cagaaggatacaaaggctcgtgtaaagatgtcaaaagcaggagatttttatccaggtact
gctgagcgagtttgcttaatttctggtaatgcagaatcaattatggaagttctttcattc
attatggaaaaaatcagagaccgacctgacttcagcaaacccacccctaaccacactcct
attcaaaatgattcatttgacaataaaatcagtcaagagagggagaaacaggtcaaaatt
ttagtcccaaacagtacagctggaatgatcattggaaaaggtggtagttacatcaaacaa
ataaaagaagaaagtggatcatatgtccagatatctcaaaaagcaaaagatgtatcctta
caagaacgttgtataactgttattggtgaacttgaacagaatcaaaaagcatgcttgatg
attcttcaaaaggttatggaagattctttgagtggaacttgcttgaatgtgagctatgct
gatattgcgggccctgttgcaaattttaacccccggggttctccctatgctatcactgca
cacacaccctcgcaaccgggtacattgcaatctggcttcaattccaccaccagcctaaat
tcaattgcctcaggtaatgcactaggaaatggcatcaacctaagtttaaatttaagtgcc
cccaactcagctacgggatcagctctaacaacccagttacttgaacacataaaggtcaca
ttgcgttctagtggatactctgacctagctaccaacgagatcatttcatctatggctgtt
ctggcacgctatggaattcttggtatgggactaggattagctggtactgctccggttcaa
catcgcacagctgccacaggcctgcctgctggcagttatcttggtgttccaatggactca
acgcctgctcaggtaccaagccttgcaagtggtcgagatactggagtctttggccccatt
ggaaccatcactggtcttggtcctgctggaggatgtgccagtacaccccgtaatagtgtt
aaagaaaggtttggagatgcaagtgatgtgggtggatttgacatgttccttcgtaaccct
gctcattccgccttgtcgacctcacttaacaataattcttttggacttggtaccagtggg
cagtctcttgaacacagtcctactccagcagatcccaaggatggaagaaaggttgatatt
gagattccagaattaattgtaggagccattcttggatttggaggcagatcactagtggaa
attcaacatctaagtggagcatcaatacagatctcaaagaaaggccagtatgctccaggt
acaagaaatcgaattgtaaccatttcaggcttgccaaatgccattcaaactgcgcagtac
ctcattgagcagcgagttagtgaagaggaagccaaacgcgcacgtcagaatacaattgga
ggattactagttaactaa
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