Frankliniella occidentalis (western flower thrips): 113212025
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Entry
113212025 CDS
T07591
Name
(RefSeq) uncharacterized protein LOC113212025
KO
K13126
polyadenylate-binding protein
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03015
mRNA surveillance pathway
foc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113212025
09123 Folding, sorting and degradation
03018 RNA degradation
113212025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113212025
03041 Spliceosome [BR:
foc03041
]
113212025
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113212025
mRNA cycle factors
Stress granule specific factors
113212025
Spliceosome [BR:
foc03041
]
Complex C
Other components
Complex C specific factors
113212025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBD_DEAH11
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113212025
NCBI-ProteinID:
XP_026286376
UniProt:
A0A6J1T000
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MDRRNWGYGGGGGGGGGGNYRADYGNNYRSDYNNYGGNYAGSHGGYNSYNNSYDNSYNSY
NNADHFTPPSNRGYGGRDGYGGYAPNGRFFPPAGPPGRMGGPATPPQRPAARGRVDWKKR
RRDNNASRETKSAAFLERKKRTLFLRNCPEKPEDALKEELKTLFAECGKVEQVTINKQEL
SCLPGPEKKVSIEVRIVMGTEEEAKKGLEKHGTVIEDRHLVVSRQESDFESWKTTVVCCL
NISLDVDDEDLWRFFDECGKIKNVKRVNATSGDGRLYGQVHFENEEEAQKALSLDGKELK
GKPVKLRMWASLKDRPGLGVVVLNLPYGITRKEALEFMDGCGDISNLKIDSAETTNRRAV
FVFWDADGVEKAILRDRQELNKQEVRVLPWDGQRLINPVYLADLPPAILEVDIWKVFQVC
GIIEHVHKEMKKNNIKAYIEFQDPESVVKAQTLDGILIKGSSVKVMADKDEWDNYPPAPT
AVSQAGTQNGQSEQNSASVKEEASEESKVEHSGEQSNAESDANVKEEHQDGEDEEHGEGQ
DEAHEAHDEALEAHDDAQGSECNPEGSQEEANETSADEVKQESEEVAEIQEGRSTRKRRA
ATATPLKTPPKTRRGR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaccggagaaactggggatatggtggtggtggcggcggcggaggaggaggaaactat
cgagctgactacggaaataattatagatctgactacaataactatggaggaaattatgct
ggtagtcatggtggctacaactcctacaataactcttacgacaattcttacaactcctat
aacaacgccgaccactttaccccaccatctaatcggggatatggaggaagggatggctat
ggaggctatgccccaaatggacgtttcttcccacctgctggaccaccagggagaatgggg
ggacccgctacgcctcctcaaaggccagctgcaagaggtagagtggactggaagaaaagg
aggcgtgacaataatgcctcgagagaaactaagagtgcagcatttctagagagaaagaag
cgcactctttttcttcgcaactgtccagagaagcctgaagatgccttaaaagaggaactt
aaaacattatttgcagagtgtggaaaagttgaacaggttacaataaataaacaagaactc
agctgcctccctggaccagaaaagaaagtctcaatagaggtgcgcatagttatgggaaca
gaagaggaagctaagaaaggcttggagaaacatggaacagtcattgaggatcgtcatctt
gttgtatctcggcaagagagtgattttgagtcttggaaaacgactgttgtctgttgcctc
aacatatctcttgatgttgatgatgaagatctgtggagattttttgatgaatgtggtaag
ataaagaatgtgaaaagagtaaatgccacaagtggggatggtcgtttgtatggtcaagtt
cattttgagaatgaggaagaagcccagaaagctcttagtttagatggcaaagagttgaaa
ggcaaacctgttaagttgagaatgtgggcatctcttaaggaccgtcctggtcttggtgtt
gtggttctcaatttaccttatggtattacaaggaaggaggcattggaatttatggatgga
tgtggtgatatttccaacctcaagattgactcagctgagacaaccaaccgcagagctgta
tttgtattttgggatgctgatggcgttgagaaagccattttacgtgaccgacaagagcta
aacaagcaagaagtgcgtgttttgccttgggatggccaacgactgattaatccagtgtat
ttggctgatcttcctccagcaattctggaagttgacatctggaaagtattccaagtctgt
ggaatcattgaacatgttcataaagaaatgaagaagaataacatcaaagcttatattgag
ttccaggatccagagagtgttgtcaaagctcaaaccctcgatggaattctgatcaaagga
tcatctgttaaagtaatggcagataaggatgagtgggataattatccaccagcgccaaca
gcagtctctcaagcaggaactcaaaatggtcaaagtgaacaaaattctgcttcagttaag
gaggaagcttctgaagaatctaaggtagagcattcaggagaacaatctaatgctgaatca
gatgcgaatgtaaaagaagaacatcaagatggagaagatgaggaacatggtgaaggccaa
gatgaagcacatgaggctcatgatgaagcactggaagctcatgatgatgcccaaggaagt
gaatgtaatcctgaaggttcacaagaggaagcaaatgaaacatctgctgatgaggtcaaa
caagagtcagaagaggttgctgaaattcaggaggggcgtagcactcgcaagcggagagct
gcgacagccaccccactgaaaactccacccaaaactcgacgagggcgataa
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