Frankliniella occidentalis (western flower thrips): 113212245
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Entry
113212245 CDS
T07591
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113212245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113212245
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113212245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
G-alpha
Motif
Other DBs
NCBI-GeneID:
113212245
NCBI-ProteinID:
XP_052124286
UniProt:
A0A9C6TXN1
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MARHRNVRSMNYADEYDGYDDVYGHSVEDDYSISPSDAKYVFDRNTEKAQMSAFLAGDED
IAEDDEDAEEGGTECPKRRDSDTLGLRTRNLSELDEARLRSCLDEIRDVIGDSMSEASLA
DIILSNDFDVAKSLDAALSNAAEKSNRPPSKIKKQETPLPQREPRVHPTTAGKPQKTEDP
VAIVTSKPDAFTSAEKVQPPVKIVPPGAKTVNVTKGFEVLSVKQENDSGEGLRPAFSTPR
TQSPASGRGTPSGRNTPSMGELGEGDGTPREIRARPRVSKEDILAKYKSDRGDNKEQLHM
VVIGHVDAGKSTLMGRMLLEMGQVSKKTMHKYEQESKKLGKQSFVYAWILDETGEERGIT
MDVGQSKFETNSKSVTLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFESGGQ
TREHALLVRSLGVSQLGVVVNKLDTVGWSQERFEEITAKLSAFLRQAGFKESDVTYVPCS
GLTGENMVVKPTAAELTSWYTGPCLLEVIDGFKTPERPITKPFRMSINDIFKGMGAGFCV
SGRIETGMVQPGDRVLVSPLGETAFIKALLVDDMPIQVAFAGDCVSATISGLDQQNISVG
YILCDPQRPIPITSRYQARIVIFQLKVPITKGYSVVMHHQSLVEQAVVSKLVAQLHKSTG
AIIKQKPRCLTGNTIALVELEVSRPICLELYGDIKELGRVMLRVGGVTIAAGLVTKIIK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacacaggaatgtgaggtctatgaactatgctgatgagtatgacggctacgat
gatgtttatggacactctgtcgaagacgattacagcatctccccgagtgatgctaaatat
gtttttgatagaaacacggaaaaggctcagatgtcagcatttctggccggagatgaagac
attgccgaagacgatgaagacgctgaggaaggaggaactgaatgccctaaaaggagagac
tctgataccttggggctccgtaccagaaatttaagtgaattggatgaagctaggttaagg
tcgtgtttagatgaaatacgtgatgtgattggagattctatgtcagaggcttcccttgca
gacatcattctttcaaatgactttgatgtggccaagtcattagatgctgctctatcaaat
gctgcagaaaaatcaaacagacctccatcaaaaataaagaagcaagagaccccactgcct
cagagagaaccaagagttcatccaaccacagcaggtaagcctcaaaaaacagaagaccca
gtggctatagtaacatcaaaaccagatgccttcacctcagcggagaaggtgcagcctcca
gtgaagattgttccccccggtgccaagactgttaatgttacaaagggatttgaagtgctg
tcagtgaaacaagaaaatgattctggagagggattacgacctgccttctcaacaccgcgc
actcagtcccctgcgtccggacgcggaacaccgtcaggtcggaatactccaagtatgggt
gaactaggagagggtgacggaactccacgggaaatacgagccagacctcgagtgtcaaag
gaagacattttggcgaagtacaagagtgacagaggtgacaataaagagcagctgcacatg
gttgtgattgggcatgtcgatgcaggtaaaagtaccctaatgggacgtatgctgttagag
atgggacaggtatcaaagaaaactatgcacaaatatgagcaggagagcaaaaagttggga
aaacagtcatttgtttatgcatggatcctggatgaaactggcgaggaaagaggaattact
atggatgttggtcaatctaagtttgaaacaaattcaaaatctgttacccttttggatgct
cctggccacaaggattttatcccaaatatgattactggtgccacgcaggctgatgtagca
cttcttgttgttgatgcaactagaggggaatttgaaactggttttgagagtggtggacaa
acccgtgagcacgctctgctggttcgctccctgggtgtgagtcagcttggggttgtggta
aacaaacttgacacagtggggtggtcacaggaaagatttgaggagataactgcaaagctg
tccgcttttctacgccaagcgggtttcaaggaatcagatgttacctatgtaccctgtagt
gggctgacaggtgaaaatatggttgtaaaacccactgctgctgaacttacatcatggtat
actggtccatgtttattggaagtcatagacggttttaaaacgccagagaggccaataact
aaaccattccgaatgtcaataaatgacatatttaagggcatgggagcaggattttgtgtt
tctgggagaattgagactgggatggtccaaccaggagacagagttcttgtttctcccctt
ggtgaaacagcatttatcaaagcacttttggttgatgacatgcctatccaagttgcattt
gctggagattgtgtaagtgctacaatttctggtctagaccagcaaaatatatctgtgggc
tatatactctgtgatcctcaacgaccaatacctattacctctcgttatcaagcacgtatt
gttatattccaacttaaagtccccattactaaaggatactcagttgtgatgcatcaccag
tcacttgttgaacaggcagttgttagtaaactggttgcccaactccacaaaagcactgga
gccattattaagcaaaaaccccgttgtttgactggaaacacaattgctttagttgagctt
gaagtttctcgaccaatttgcttggaactttatggtgatattaaggaattgggacgagtc
atgttacgtgttggtggtgttactattgcagcaggattggttacaaagattataaagtga
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integrated database retrieval system
