Frankliniella occidentalis (western flower thrips): 113212331
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Entry
113212331 CDS
T07591
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113212331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113212331
04121 Ubiquitin system [BR:
foc04121
]
113212331
03036 Chromosome and associated proteins [BR:
foc03036
]
113212331
03400 DNA repair and recombination proteins [BR:
foc03400
]
113212331
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113212331
Ubiquitin system [BR:
foc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113212331
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113212331
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113212331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_6
Ank_KRIT1
zf-C3HC4_3
zf-RING_10
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
113212331
NCBI-ProteinID:
XP_026286770
UniProt:
A0A6J1T574
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MASNTSGIEKWKNVKAAMVDLQDLLRCWTCNKIFLEPVSYRCGHFFCADCAKESGTKCGT
CNVPSLASEIRSDRIVTAVVGCFQKLSQIINSEECSDKTISNTTTNEKKASRSTLYDYDT
HEDSNISPSKKDTSKVPDDSKGNLRENESTNVTKDIPQKRPRKMSEKLKEAMADLGVNEE
NFLKPSSVKKQPVKETKKKVGARKKSLSTSIPTTSNQSVDLSGSINLEETMLKNTSNPSS
SEPIKDLTGKKTTSNEEFLKDSFITPKKPRRSTKSSSTIASTPKSTEVKYTPRKSNTPGR
ELSKKNHKGETPLHVACIKGNVDRIRTLLSANASPNTKDNAGWTPLHEAAIRGFTEVVEL
LLKAGALIDVPGTGNVTPLHEAVIYNHIAIVKSLVAHGADIHARSSDGKTPIDLATSSEI
KEVLLNTEPKDQLSKSDSSHQQNNLAQQEMVLCGEASLTAEERNELCALAVTLDARLVPV
FGPDVTHFIVPSNANCTCPPSLEVLCAILKGVLILTSDWISVCKDGDIGVDIDLFELAGI
TDFRDSEAPKKSRINAQKQLPRLFDGCHFYLTSNVQYKLQTCLLTRSDIMTLVKSGGGIV
LTRQPDPEAIPAKEQTVPYHAPRDGPLTATSHIILYSPGKGEPDMKYNMKHCKTLPMEWF
IHSVVNWCLLDP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaatacatcagggatcgagaaatggaaaaatgttaaagccgctatggtcgac
ctgcaagacctactaaggtgttggacatgcaacaaaatatttcttgagccagtaagctac
aggtgcggtcacttcttttgtgctgactgtgctaaagaatcgggaacaaaatgtggcacc
tgcaacgttccatcccttgcctcagaaatcagatcggaccgtattgtgactgcagtggtt
ggatgctttcaaaaattgtcccaaattatcaattctgaagaatgttccgataaaaccatc
tctaacactaccacaaacgaaaaaaaggcatccagaagcactttgtatgattacgataca
catgaagacagtaacatatctccttctaagaaagatacaagtaaagtccctgacgactcc
aaaggtaatttgagagagaatgagagtacaaatgtaacaaaagatataccccaaaagcgt
ccaaggaaaatgtctgaaaaacttaaagaagctatggcagacctaggggtgaatgaggaa
aatttccttaagccatcttctgttaaaaaacaaccagtcaaggaaactaaaaaaaaagtt
ggtgcaaggaaaaaaagtttatctacttccattcctactactagcaatcaatcagtagat
ttatctggtagtattaatcttgaagagacaatgttgaaaaataccagtaatccttcaagt
tctgagccaataaaggacttaacaggtaagaagactacaagtaatgaagaattcctcaaa
gattcctttataactcctaaaaaaccaagaaggtcaactaagtcttcaagcaccatagct
tctacccccaagagcactgaagtaaaatatactcctagaaagagtaacactccaggtaga
gagctctccaaaaagaaccataaaggtgaaacacctttacatgttgcgtgcattaagggc
aatgttgaccgcattcgtactcttctcagtgccaacgcaagtccaaacaccaaggacaac
gctggatggactcccttacatgaagcagcaatccgtggttttactgaggtggtggaactg
ctcctcaaggcaggagctcttattgatgtgcctggaacaggcaatgttactccacttcat
gaagctgttatctataatcatatagcaattgtgaaaagtcttgttgctcatggtgctgat
attcatgcacgatcttctgatgggaaaactcctatagatttagcaacatctagtgaaata
aaagaagtgttgctaaacactgaaccgaaagatcagcttagcaaatctgactcaagtcat
cagcagaataatttggctcagcaggaaatggttttgtgtggagaagctagccttacagct
gaagaaagaaacgaattgtgtgctttagctgtgaccttagacgctaggctagttcctgtc
tttggccctgatgtgacacatttcattgtgccatcaaatgccaattgtacatgcccacct
tcattagaggtgctatgtgccattctaaaaggagttcttattttgactagtgattggata
agtgtctgtaaggatggagatataggcgttgatattgatttatttgaacttgctggaatt
actgatttcagagattctgaagcacctaaaaaaagtagaatcaatgcccaaaagcagtta
cctcgcttatttgatggatgccatttctacttaaccagcaatgtccagtacaaacttcag
acatgtttgttaacccgatcagatataatgaccctggtcaaatcaggcggaggaattgta
ttgacccggcaaccagatccagaagctatacctgctaaagaacagacagttccttatcat
gccccaagagacggcccccttactgccacttctcatattattttgtattctccaggtaaa
ggggagccagatatgaagtataacatgaaacactgtaagacccttccaatggaatggttt
attcacagtgtggtcaactggtgtctgttggatccgtaa
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integrated database retrieval system
