Frankliniella occidentalis (western flower thrips): 113212400
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Entry
113212400 CDS
T07591
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113212400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
foc04147
]
113212400
Membrane trafficking [BR:
foc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113212400
Exosome [BR:
foc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113212400
Exosomal proteins of bladder cancer cells
113212400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
zf-Tbcl_FmdE
PHF5
Motif
Other DBs
NCBI-GeneID:
113212400
NCBI-ProteinID:
XP_026286865
UniProt:
A0A6J1T5G0
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLSSLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH
SQQPLFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTVFHHEYPWILSASDDQTIRIW
NWQSRTCICVLTGHAHYVMCAQFHPSEDLVVSASLDQTVRVWDISGIASQCNSQGLRKKN
VAPGPGGLEEHLRNPNATDLFGQADAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRLI
KMWRMNESKAWQVDTCRGHYNNVSCVLFHPRQELILSNSEDKSIRVWDATKRSCLHTFRR
EHERFWVLAAHPTLNLFAAGHDSGMIIFKLERERPAYAVHGNFLYYVKDRFLRRLDLTAS
KDITLMQLRGGGRTPVYSMSYNPAENAVLLCTRTSNVETSTYDLYVIPKETDSQNPEAPD
SKRASGITAIWVARNRFAVLDRTHALVIKNLKNEVTKKVQTPACDEIFYAGTGMLLLRDP
DAITLFDVQQKRTLSQVKISKCRYVVWSADMSLVALLAKHTVLICTRRLETKCSIHENTR
VKSGAWTDDGIFIYTTSNHIKYALSNGDHGIIRTLDMPIYITQVKGNQVFNLDRECRPRV
MNIDPTEFKFKLALINRNYDEVLHMVRNARLVGQSIIAYLQQKGYPEVALHFVKDEMTRF
GLALECGNIEVAVESARALDDKHCWECLGEAALLQGNHQVVEMCYQRTKNFDKLAFLYLI
TGNLEKLRKMTKIAEIRKDCMGQYQGALYLGDIAERVKVLKPTQPSLAYLTAATHGLEEE
AEQMKEQLLSAGKKLPELNPDAMLIRPPAPILQAESNWPLLTVTKGFFEGAMGNRTTNAA
SAALAAVPVEGDVEAEGWDTDPEVGEEGDGEEGAVEGGEGGTGWDEGDDDLELPPELEET
LPAAAEEGYFVAPTKGSSQGQLWVNNSQLAVDHILAGSFESAFRLLHDQVGVVNFNAYES
VFMSTFSRARASYPAFPMTGSIYRHLQRSWGDSGPKGGLPAVGLKLNDLVQRLQVCYQLT
TGGKFIEAVEKFRALLLSIPLLVVDTKPDIVQAQALLQICREYISGLMMELLRKDLPKNT
LEENKRNCEMAAYFTHCNLQPVHQILTLRTALKLFFKLKNFKTAGSFARRLLELGPSPEL
CQQAKKFLQACDMNPVDEHKLTYDEHNPFSLCGVTYKPIYRGKPEEKCPLCGTSYMPQYK
GTVCTVCTVAEVGKDCLGLRISTIQFR
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgaagtttgagacgaaatctgctcgggtgaaaggtttgtcctttcacccaaaa
cgtccatgggttctgtcaagtttgcacaatggcgtcatccagctgtgggactaccgcatg
tgcacgctgctggagaagttcgacgagcacgacggcccggtccggggcatctgcttccac
tcgcagcagcccctcttcgtgtccggaggagacgactacaaaatcaaggtttggaactac
aaacaaaaacgctgtattttcacgttgctgggccacttggactacatccggacgacagtt
ttccatcatgagtacccatggattctcagcgcctcagatgaccagaccatcaggatttgg
aactggcagagccggacatgtatttgtgtcctgactggtcatgcccactatgtaatgtgt
gcgcaatttcacccatctgaagatcttgttgtgtccgcctcattggatcagacagtccgt
gtctgggatatctcaggtattgccagccagtgcaacagtcaaggccttcgcaagaaaaat
gttgctcctggtcctggaggtcttgaggagcacctcagaaatccaaatgccaccgatttg
ttcggccaagctgatgctgtggtgaagcatgtgcttgagggacacgatcgcggagtgaac
tgggctgccttccacccaactctccctctcattgtgtctggcgctgatgatcgcttgatt
aagatgtggagaatgaatgaatccaaggcttggcaggtggacacttgtcgtggacactac
aacaatgtgtcatgtgtacttttccatccgcgtcaagaactcattctctccaattctgaa
gacaaaagtatcagagtatgggatgcaacaaagcgctcttgtcttcatacattccgccga
gagcatgaacgtttctgggtactagctgctcacccaacactcaacctctttgctgctggt
catgattcaggaatgataatcttcaagcttgaacgtgaacgcccagcgtatgctgttcat
ggaaacttcctctattatgtgaaagatcgcttccttcggcggctggacctaacagcatca
aaggacataactctaatgcaactaagaggaggtggacgcacaccagtctatagcatgtcg
tacaatcctgctgagaatgcagttttgttgtgcacccgcaccagtaatgtggagacatcc
acttatgacctgtatgtcattcccaaagaaaccgacagccaaaatccagaggcacctgac
agcaagagagcatctggcatcactgccatttgggttgcaagaaatcgttttgctgttctg
gaccgcactcatgcacttgtgattaagaatttgaagaatgaagttaccaagaaggttcaa
acaccagcctgtgatgagattttctatgctggtactggtatgctccttctcagagaccca
gatgccataacattgtttgatgtgcaacagaaaagaactttgtctcaggtgaaaataagc
aagtgtcgctatgttgtttggtctgctgatatgtctttggtagctctgctagccaaacat
actgttctaatttgcactcgccggttggagaccaagtgctcaattcatgaaaacaccaga
gtcaagtctggagcatggactgatgatggcattttcatctacaccacaagtaaccacatc
aaatatgctttatccaacggtgatcatggtattattcgtactttggacatgcctatctac
atcacccaagtcaaaggaaatcaagtgttcaaccttgatcgtgaatgtagacccagagtc
atgaatattgatcccaccgagttcaaatttaagttggccctgataaaccgtaactatgat
gaggttctacatatggttcgcaatgcaaggttggttggacagtctattattgcctacctg
cagcaaaaaggatatccagaggtggctcttcactttgtcaaggatgaaatgactcggttt
ggtcttgctctggaatgtggaaatattgaggttgctgtagagtcagctcgtgctcttgat
gacaagcactgctgggagtgtttgggcgaagcagctcttcttcaaggaaatcaccaggtc
gttgagatgtgttaccaaagaactaagaacttcgacaagcttgcatttttgtacctcatc
actggcaacttggagaaactgcgcaaaatgactaagattgctgaaatccgtaaagactgt
atgggtcagtaccaaggtgccctgtacctgggagacattgctgagcgggtgaaggtttta
aagccaacacagccttctcttgcctatctcactgctgctactcatggattagaagaagaa
gcagaacaaatgaaagaacagctgttgtcagctggaaagaaactgccagagctgaatcct
gatgccatgctgattcgtcctcccgcacctatattacaagcagaatccaactggcctttg
cttacagtcaccaagggcttctttgagggagccatgggcaaccgtaccacaaatgctgcc
agtgctgctttggctgccgttccagtggaaggtgatgttgaggctgagggttgggacact
gatccagaggtcggtgaggagggtgatggtgaagaaggtgctgttgaaggtggagagggt
ggtactggttgggatgagggtgatgatgatttggagctgcctcctgagctggaagaaacc
ttacccgctgcagccgaggaagggtattttgttgctccaacaaaaggatcatctcagggt
caactctgggtcaacaattcccaattggctgtggaccatattcttgctggttcatttgaa
tctgcatttagattattacatgatcaggttggtgttgtaaacttcaacgcatacgaaagt
gttttcatgagcactttcagccgagcaagagcttcctatcctgctttccccatgactggt
tctatctaccgtcacctccaaaggagttggggcgattcagggcccaaggggggcttacct
gctgttggactaaaactaaatgatcttgttcagagattacaagtttgctatcaattgaca
acaggtggcaaatttattgaagcagtagaaaaattcagagctcttcttctaagcattcct
cttttagttgttgacactaagccagacattgtccaagcccaggcgctccttcagatatgc
agagaatatatttcaggcttaatgatggaacttcttcgtaaagatctccctaaaaacact
ctagaagaaaacaaaagaaattgtgagatggcagcctatttcactcactgcaatctccag
cctgtccatcaaattcttaccctccgcacagctctcaagctgttctttaaattgaaaaat
ttcaaaactgctggttcctttgcgcgaaggttgcttgagctggggccaagtccagagtta
tgccaacaagcaaagaaattcttacaggcatgtgatatgaatcctgttgatgagcataag
ttaacatatgacgagcacaatcctttctcattatgtggagtcacctacaagccaatctac
cgtgggaaaccagaagagaaatgtccactgtgtggcactagttatatgccacagtacaag
ggcactgtatgcacagtctgcactgttgctgaagtaggcaaagactgtctaggacttcgt
atttcaaccatacagttccgataa
DBGET
integrated database retrieval system
