Frankliniella occidentalis (western flower thrips): 113212457
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Entry
113212457 CDS
T07591
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113212457
03036 Chromosome and associated proteins [BR:
foc03036
]
113212457
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113212457
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
113212457
SLIK complex
113212457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
113212457
NCBI-ProteinID:
XP_026286936
UniProt:
A0A6J1T8F1
LinkDB
All DBs
Position
Unknown
AA seq
1836 aa
AA seq
DB search
MHQVLSAEGSESASDSEKNSSGSDNESNSSSAASGSDSDSGSSSSSKSASGSGSDSEGSH
SKSRSSIAKISPDKSSPDKSTPEKSRPNSRSRDRTGLKQVKKNRDRSSSQTTAECWEENP
EVYGIRRSGRSRKEPERLRTVESDSGEKIRSKRSSRQSSRNQWNSDSGSESEESYDERPP
PSKSVQRNRTIPSRRPIAKSHAGGSRSSARKDDQKNRRRGSDSSDESSLDSENGATNRLY
SNAYYYDDPYRQTSLRTNRSVTYKEASDDETGSEDLVELDEEEAAAAAAAAAEPDNSETI
EKVLAARRGKRGAVGNITTMYAVETNGDPNEGSDPNDFENTELQYLIKWKNWSHIHNTWE
SEFSLKENKVKGLKKLENFVKKEEEINLWRSHSNPEDLEYYDCQLELSQDLLKSYTKVER
IIAETTKTSNAQVDYYVKWENLPYSEATWEDGILINGRWPEKVKEYREREDSRQCPSKLS
RVLKSRPKFVKIEKQPSYFGGEKDLVLRDYQMDGLNWLVGSWTKNNSVILADEMGLGKTI
QTICTLYYLFMEYQLYGPFLLVVPLSTMTSWQREFALWAPKINVVTYLGDVISRNIIRDY
EWFHAGSKRLKPNAVLTTYEIVLKDKVFLGSQSWAALMVDEAHRLKNDDSLLYKALKDFQ
TNHRLLITGTPLQNSLKELWALLHFIMPHKFETWEAFERDHEDSAKKGYAKLHKQLEPYI
IRRVKKDVEKSLPAKVEQILRVEMTSVQKQYYKWILTKNYNALRKGVKGSSTTFLNIVIE
LKKCCNHASLTKPPDPAEIQYKPPAEHIKELVKGSGKLVLLDKLLVRLRETGHRVLIFSQ
MVRMLDILAEYLQLRHFPFQRLDGSIKGELRKQALDHFNADGSQDFCFLLSTRAGGLGIN
LATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTRSSVEEDIVERAKEKMVL
DHLVIQRMDTTGRTVLDKKSASSSTPFNKDELTAILKFGAEKLFEKEEDADDEDEPTCDI
DEILRRAETRDEAPTMAGDELLSAFKVATFAIDEDEGPENLPKTEEDEESKDWDDIIPET
FRRKVEEEEKAKEMEDLYLPPRSRKTLQQINQSDTEEGSGRGRKRRKGGEESGSSEEESD
EERPKKRGRPSRREIKGFNDAEIRRFVKSYKKFSAPMKRLEAIAEDAELTDKSQSDLRKL
AELLRERCLQAVSENQENQAGEENTGSKQKGRVSLKIANVAVNAKAVLACEEEMASLDEM
IPNEPQERTKWMIDFKTKAANFDCDWGAEEDSALLKGIYQYGMGSWEAIKMDPTLGLGDK
ILMNQEKKPQGKHLQTRSDYLLRLLRKYSDQKKGVPKPKRQRKAAVKALTKEIVDDDSSG
EDNTNMSGTASLNSSSTQKRASKKNSDGKKSDDDDDMKDTKDDLKDIKEKVEKKKKGKEA
KEKKERKKKKKQEGPMHFTANSEPVSLDLLGNLDPAIFSECKEKMRPVKKSLMALDNPDT
TLSEHEQLKKTRQCLMLIGDNINKCLNELKDPEKVKAWRNYLWYFVSKFTEFDAKKLFKF
YCKYAEKKNHHDEKKDKKKEKDEKEKKVEKDIKKEPKEEKTPGSKRPHDEDSQSVPAKKT
LDGEGRDKEEKKEKDKEKKKKDKDRERDRDRERPSSRGPSTPQRSGQVGENPHPGNRAPN
EGSNDRWNSSGSQRERFSGEHKRDRFDNYSRGSAQQGYHRDRERDRDRDRDRDRRDRDRD
RDRSRDFNRDRDRDQRRFHHTPHMPYGAHYGPSSTAPGYGHAPGMYPQQDMYGRDSGRYP
GAPVNAAGGGPDWQSRPGKDREYSRDFDRRPPPNPS
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaggtcctatcagcagaaggctcagaatccgcctctgattctgagaaaaattca
tcaggttcggacaatgaatctaactcatcttcagcagcctcagggtcagacagcgattct
ggatcgagctcctcatctaaatcagcttcaggcagtggatcggattctgagggcagtcat
tctaagtcacgttcatccatagcaaagatttctcctgataaatcttcaccggataagtca
actccagagaaaagtcgacctaactcaaggtctagggacaggactggtttaaaacaggta
aagaagaatcgggatagatcttcatcacagacgacagcagagtgctgggaggagaatcct
gaggtttatggcatcagacgctcagggcggtctaggaaggagccagaacgcttacgaaca
gttgaaagtgactcaggggaaaagatcaggtcaaaacggagttctagacagtcatccaga
aatcaatggaactctgattcaggatcagaatcagaggaatcttatgatgagcggcctccc
cctagcaaatcagtccaacgaaaccggactatcccatcacgtcgccccatcgctaaatca
catgctggtgggtcccggtcgtcagctagaaaagatgatcaaaagaatcgacgaagagga
agtgattcctcggatgaatctagtttggatagtgaaaatggagctacaaacaggttgtat
tccaacgcctactattatgatgacccatacagacaaacttcgcttcggaccaatcgttct
gtcacttacaaggaagcaagtgatgatgagactggctctgaagatttggttgagcttgat
gaagaggaggcggcagctgctgcagctgctgcagcagaaccagataactctgaaaccatt
gagaaagttttggcagcccgaagaggcaaacgtggagcggttggaaatataactactatg
tacgctgtggaaactaatggagatcctaatgaaggttctgatcctaatgattttgaaaat
acagaattgcaatatttaatcaaatggaagaattggtctcacatacacaacacatgggaa
tctgagttttcactcaaagagaacaaggttaagggtctgaaaaagcttgaaaattttgtg
aagaaagaagaagaaatcaatctatggcggtctcattcaaatccagaggacttagaatac
tatgactgtcaattggagttgtcccaggacttgttgaaaagttacaccaaagttgaacgt
attatagctgagacgacaaaaacatctaatgcccaggttgattactatgtaaaatgggaa
aacttgccatacagtgaggccacatgggaagatggtatactcattaatggcaggtggccg
gaaaaagttaaagaatatagagaaagagaagactcacgccagtgtccatctaaattgtct
agggttctcaagagtcggcctaagtttgtaaaaattgaaaagcaaccttcctattttggt
ggtgagaaggatttggttctgagggactaccaaatggatggtcttaactggttggtgggc
tcctggaccaaaaacaattctgtgattctagctgatgagatgggacttgggaaaacaatt
caaaccatctgcactttgtattacttgttcatggagtatcagctgtatggccctttttta
ttggttgtacccctatcaaccatgacatcttggcaacgagagtttgccctgtgggctcct
aaaataaatgttgtcacttatcttggtgatgtcatttctagaaatattatcagggattac
gagtggtttcatgctggttctaaacgactgaaaccgaatgctgtacttacaacatatgaa
atagttctgaaagacaaagtcttccttggaagtcaaagttgggcagcattgatggttgat
gaagctcatcgcctgaagaatgatgattctttattatacaaagcactcaaagacttccaa
accaatcatcgcctcttaatcacaggaactcctcttcaaaacagtttgaaagaattatgg
gccctcttgcacttcattatgcctcataaatttgagacttgggaagcctttgagcgtgac
catgaagatagtgccaagaaaggttatgcaaaacttcacaaacagctggagccttacatc
atcagaagagtgaagaaagatgtggagaagtcattgccagcaaaggttgaacaaattctc
agagttgaaatgacttcagtacaaaaacagtattacaaatggattttaaccaaaaattac
aatgctcttcgcaagggagtgaaaggatcttccactacctttctgaatattgttattgag
ttaaagaagtgttgcaaccatgcatcacttacaaaacccccagatccagcagaaattcaa
tacaaaccccctgctgagcatatcaaggaattggtcaaaggatccggtaaactagtatta
ctagacaagcttcttgtacggttaagagaaacaggccatagagtccttattttctcccag
atggtcaggatgttagatatattagcagagtatctacaactgagacatttcccattccaa
aggctggatggaagtattaagggtgaactgcgtaagcaagcattggaccacttcaatgca
gatggctctcaggacttttgttttctgctatctaccagagctggtggcttaggcattaat
ctagctactgcagatactgtcatcatttttgattctgactggaaccctcaaaacgatctc
caagctcaagcaagagcccatcgaattggccaaaaaaatcaagtcaatatctaccgtctt
gtgaccagatcatcagtagaggaagatattgtagagagagctaaggaaaagatggtactt
gatcatctcgtcattcaaagaatggacaccactggtagaactgtgcttgataaaaagtca
gcctcatcatcaacgcctttcaataaagatgagttaaccgctattcttaaatttggtgct
gagaaattgtttgagaaagaagaagatgctgatgatgaagacgaaccaacttgtgacata
gatgaaattttgcggcgtgctgagactcgtgatgaggcaccaacaatggctggtgatgaa
cttttgtctgcattcaaagtggctacctttgccattgatgaagatgaaggccctgaaaat
cttccaaagacagaagaggatgaagaaagtaaagattgggatgacattattcctgaaaca
tttcgtagaaaggttgaagaggaagagaaagctaaggagatggaagatctgtacctgcca
cctcgaagccgcaaaacactccaacaaattaaccagtctgacacagaagaaggtagtggc
agaggacgaaaacgacggaagggaggtgaggaatcgggttctagtgaggaggagagcgat
gaggaacgcccaaagaaaagagggcggccatcaagaagagaaattaaaggattcaatgat
gccgagatacggcgttttgttaaaagttacaaaaagttctctgcgcccatgaaacgtttg
gaagctatagctgaagatgcagaactcactgataagtctcaaagtgatttacgcaagctt
gcagaacttttaagagagagatgtttgcaagcagtatcagagaaccaagaaaatcaagca
ggggaagagaatacaggttccaagcagaagggccgtgtttcccttaaaattgctaatgtt
gctgtcaatgccaaggctgttctggcatgtgaagaagagatggcttctttagatgaaatg
atacctaatgaaccacaagaaagaacaaaatggatgatcgattttaagaccaaagctgct
aattttgactgtgattggggtgcagaagaagactctgctcttttaaaaggaatatatcag
tacggtatgggatcatgggaagctataaagatggatccaaccttaggacttggcgataaa
attttgatgaatcaggaaaagaaacctcaaggaaagcatcttcaaactcgttctgactat
ttattgaggcttcttcgcaaatatagtgaccagaagaaaggggtgccaaaaccaaaacga
caaagaaaagctgctgtcaaagcactgaccaaagaaattgttgatgatgattcatctgga
gaggacaatacaaatatgtctggcacagccagccttaactcgtccagcacacagaagaga
gcttcaaaaaagaactcggatggaaagaaatcagatgatgacgatgatatgaaagataca
aaggatgacttaaaggatattaaagagaaggttgagaaaaagaagaaagggaaagaagct
aaagagaaaaaggaaaggaaaaagaaaaagaagcaagagggtcctatgcattttacagcc
aacagtgagcctgtctctcttgacctactgggtaatctcgatccagccatttttagtgag
tgtaaggaaaaaatgagaccagtcaaaaaatctctgatggccttagacaatccagataca
acattatctgagcatgaacagctgaagaaaactcggcagtgcttaatgcttattggagat
aatatcaataagtgtctaaatgaactcaaagaccctgaaaaggttaaagcgtggaggaac
tacctgtggtacttcgtttccaaattcactgaatttgacgccaaaaagctgtttaaattt
tattgtaagtatgctgagaagaaaaatcaccatgatgagaaaaaggataaaaagaaagaa
aaagatgaaaaagaaaagaaagtggagaaagacattaaaaaagaaccgaaagaagaaaag
acgccagggagcaaaagacctcatgatgaagattcacagtctgttccagcaaaaaagaca
ttagatggcgaaggaagggataaggaagaaaaaaaggaaaaagataaggagaaaaagaag
aaagacaaagatagagaacgtgatagagaccgagagcgtccttcatctcgtggtccttct
actcctcagagatcgggtcaggttggagaaaacccacatcccggaaatagggcgcctaac
gaaggttccaatgaccgctggaattcgagtggcagtcagagagagagattcagtggtgag
cacaagcgggataggttcgacaactactctcgtggttctgcacaacaaggctaccacagg
gatagagagcgtgaccgggatcgtgacagggaccgtgatcgcagagatagagaccgagat
cgagaccgaagtcgagatttcaaccgggatcgagatcgagaccagaggaggttccatcac
acaccccacatgccttatggcgcgcattatggtccttcctctaccgcccccggttatggg
catgctccgggaatgtatcctcagcaagacatgtatgggcgggactcagggcggtaccct
ggtgcaccagtaaatgctgctggaggaggaccagattggcaatcaaggcctgggaaagac
cgagaatatagtagagactttgacagaagacctccgcctaacccctcgtag
DBGET
integrated database retrieval system
