KEGG   Frankliniella occidentalis (western flower thrips): 113212570
Entry
113212570         CDS       T07591                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113212570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:foc04121]
    113212570
Enzymes [BR:foc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113212570
Ubiquitin system [BR:foc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    113212570
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     113212570
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EIPR1 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_RIG_2nd zf-C3HC4_2 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd zf-C3HC4 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 zf-RING_2 Beta-prop_WDR35_TULP_N Beta-prop_CAF1B_HIR1 zf-RING_UBOX zf-C3HC4_3 Beta-prop_Vps41 WD40_like zf-RING_5 zf-C3HC4_4 Beta-prop_IFT122_1st Beta-prop_DCAF12 RING_XB3-XBAT31 WD40_MABP1-WDR62_1st Beta-prop_SCAP WD40_RFWD3 zf-RING_10 Beta-prop_IFT140_1st zf-rbx1 U-box Sina_RING Beta-prop_SPT8 zf-RING_4 WDR54 Prok-RING_4 zf-RING_6 TRAF3_RING
Other DBs
NCBI-GeneID: 113212570
NCBI-ProteinID: XP_026287107
UniProt: A0A6J1T299
LinkDB
Position
Unknown
AA seq 659 aa
MASNSPSSSHNTTPQRSRPAKRQHPAVLNGVGGSFEDKNNDYLCPICFELIQEAHITRCG
HTFCHQCISKSLESSGRCPKCSSSVGSLDHVFPNYLLNELISKFKAKSKVKNEFSATSSN
TREWAQSPVDGLREFVSTESRNLTLPDVNVILELLTQRKSVLEAESTYSQNKLLQEFLDH
LLRLKEAQLDLLNKEVSLIKNDLQEVERILKDCVQEELSASIDSRTSSIKSKKKTGASNS
LDSSTPQDEAQPQDSEGFNEKRLSGNIVENRLASRRKRMHTHFEDFMQCYLNIRAKEVTF
GRQSERPSLSVDAGSVSAGGLDTFRENLVKFSRYNYLRPLATLNYSSDIFNNSTIVSSIE
FDKDNEFFAIAGVTKRIKVFEYGSVIRDVVDIHYPCVEMMSTSKISCIIWNSYHKNVLAS
SDYEGAVTVWDAATGQRTKTFQEHEKRCWSVDFNAVDSRLIASGSDDARVKLWNLNMENS
VASLEAKANVCCVKFNPCSSYHLAFGSADHCVHYYDLRNMKEALMVFKGHRKAVSYVKFL
NKEDIVSASTDSQLKMWNVNNLHCLRSFVGHTNEKNFVGLATDGDYIACGSENNSLYVYY
KGLTKQLFSFKFDAVRSILEKDRKEDDVKEFVSAVCWRQNSNVVVSANSQGIIKILELV
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggcatccaattcaccctcctcatcccacaacactactcctcaacggagccgtcctgcc
aaacgtcagcatccagctgttcttaatggcgtgggtgggtcttttgaggacaaaaataat
gattatttatgtcctatttgctttgaacttattcaagaagcacacattacacgttgtgga
catacattttgccaccagtgcatttccaagtccttggaatcaagtggtcgatgtcccaaa
tgcagttcgtctgtggggtcccttgaccatgtattcccgaactacctcctaaatgagttg
atctcaaagttcaaagccaagtccaaagtgaaaaatgaattcagtgccacctcaagcaat
accagagaatgggcacagagcccagttgatggtctcagagagtttgtctccacagaatct
cgaaatcttacactccctgatgttaatgtaattcttgagttactaactcaacgaaaaagt
gttcttgaagccgaatcaacctattcacagaataagttactccaagaatttttggatcac
ttgttgaggttgaaggaagcccaattggatttgttaaataaagaggtttctctcatcaaa
aacgatttacaagaagtggaaagaattttgaaggattgtgttcaagaagaattatcagca
agtattgatagtagaacatcatctataaaatccaagaaaaagactggtgcatcaaattct
cttgacagttcaacacctcaggatgaggcacaaccacaggatagtgaaggctttaatgag
aagcgtctgtcaggaaatattgtggaaaatagacttgcttcccggaggaaacgaatgcac
actcattttgaagattttatgcaatgttaccttaatataagagctaaagaggtcaccttt
ggtaggcagagtgagagaccttcattgtctgtggatgctggaagtgtgagtgctggtgga
ttggacactttcagagagaatttagtgaaattctcacggtacaactatttaagacctctt
gcaaccctaaactattccagtgacattttcaataactcaacaattgtctctagtatagag
tttgacaaggacaatgaattttttgctattgctggtgtaactaaaagaatcaaagtgttt
gaatatggatcagtcattagagatgttgtcgacattcattatccctgtgtagaaatgatg
tcaacctcaaaaatttcatgtatcatctggaattcctatcataaaaatgttttggcaagc
agtgactatgaaggggctgttactgtatgggatgcggctactggtcagagaacaaagact
ttccaagaacatgaaaaacgctgttggagtgtggattttaatgctgttgactcacgtctc
attgcatcaggttcagatgatgccagagtaaagctttggaatttgaatatggagaactct
gtggcttctttggaagcaaaagcaaatgtttgctgcgtgaaatttaatccctgcagttct
tatcatctagcctttggttcggctgaccactgtgtacattattatgacttacgaaatatg
aaggaagctctcatggtcttcaaaggtcatcgtaaagctgtttcatatgtcaaatttcta
aacaaagaagatattgtttcagcttcaacagatagtcagttgaaaatgtggaatgtcaat
aatcttcattgtcttcgttcctttgttggacacaccaatgagaagaattttgtgggcctg
gccacagatggagactatattgcatgtggctcagaaaataattccctgtatgtgtactac
aaaggccttacaaaacaactgttcagttttaaatttgatgctgttagaagcattttggag
aaagataggaaagaagatgatgtaaaagagtttgtgtctgctgtttgttggagacagaac
tcaaatgttgtggtgtctgccaacagccagggcatcataaaaatactggaattagtctga

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