Frankliniella occidentalis (western flower thrips): 113212605
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Entry
113212605 CDS
T07591
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113212605
Membrane trafficking [BR:
foc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113212605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
EGF
DUF5527
DAG1
Orf78
Motif
Other DBs
NCBI-GeneID:
113212605
NCBI-ProteinID:
XP_052133492
UniProt:
A0A9C6XBY6
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MAPRVPVVVILGAGLLLTLMLCEDCASSGVTVLPENRELPPSVHHPDGHPLGVHPPGVHH
PDGHLLGVHPPGLHHPDGHPLGVQPPGLHHPDGHPLGVHPPRLHHPDGHPLGVHPPGLHH
PDVHPRGVHPAGTHRPANAHPGQGSSQDSPTGPQHQGWSKFSDRFDPVAGSRTCAQSEFR
CANSRCIQGHWQCDGEADCTDGSDEDPAVCDETCRPDEFTCGNSRCVQSRWVCDHDDDCG
DNSDEAHCPEHVCNADQFTCASKTCIQARWRCDGDVDCPDGSDEKGCPSVQGKIPSLCSD
REHMCQDRLTCVQRLWLCDGDTDCPDGDDESHEICANVTCRADHFQCKNHECIPGHLQCS
GTAECSDGSDEENCRAPPKRCDPKTQFDCGGGMCINQSMVCDQKPDCPAWEDEPKELCNI
NECATKNGGCSHICVDMPAGFYCDCPSGYHLNANNTCEDVNECEMPGVCSQICINEKGKF
KCECVHGYLRDPRDLTRCKAAEGHASLLFTRRHDIRKVSLDHHDITAIVNDTKSATALDF
VFRTGMIFWSDVSDKKIYKAPIDEGSQKTVVIKDDITTSDGLAVDWIYNHIYWTDSSKDT
IQLANFEGNMRKTVIKGKMEEPRSIAVNPLEGWLYWTDWGSVPKIERAGMDGSHREDIVT
HDIKWPNGLTLDLVGRQLYWLDARLHTISSCNFDGTNRRVVLYSDEYLLHPFSITTFEDY
LYWTDWEKHAVFRANKFNGSGIEAITAVHTLQNPMVVHVYHPYRQPDGENFCTAVNGHCS
HLCLPSPLMNSKSPRISCACPDGLTLLSDGLMCVEATTESRDKTSATPAEETDSLMVTLI
VIAVISIILLLAGLIIFIIYRHYMHRNIASMNFDNPVYRKTTEDQFALEKNQYQPTRVFP
ATIAEEVAFKINSLYPCYGLLHGCRDEQGMNDSLAQEPLTSPGSNDYV
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggccccacgcgtccccgtcgtcgtgatcctgggcgccgggctcctgctgacgctcatg
ttgtgcgaggactgcgcctccagcggcgtcacggtgctgcccgagaaccgcgagttacct
cccagtgtacaccacccggacgggcatcctcttggcgtgcaccctcccggtgttcaccac
ccagacggacatcttctcggcgtgcaccctcccggtttacaccacccggacgggcatccc
ctcggcgtgcaacctcccggtttacaccacccggacgggcatcctctcggcgttcaccct
ccgcgtttacaccacccggacgggcatcctctcggcgtgcaccctcccggtttacaccac
cccgacgtgcatcctcggggcgtacaccctgctggcactcatcgccccgccaacgcgcac
ccaggacaaggctcaagccaagactcacctactggtccgcaacaccaggggtggtctaaa
ttcagtgatagattcgatccagtggccggcagtcgcacgtgcgcgcagtcggagttccgg
tgcgccaacagccgctgcatccagggccactggcagtgtgacggcgaggcggactgcacc
gacggctccgacgaggaccccgccgtatgcgacgagacgtgccgcccggacgagttcacc
tgcggcaacagtcgctgcgtgcagagccgctgggtctgcgaccacgacgatgactgcggc
gacaactctgacgaggcgcactgccccgagcacgtctgcaacgccgaccagttcacctgc
gcgtccaagacgtgcatccaggctcgctggcgctgcgacggtgacgttgactgcccggac
ggctccgacgagaagggctgcccatctgtgcaagggaagatccccagtctgtgctccgat
cgggaacacatgtgtcaggatcgtctgacgtgcgttcagaggctatggctttgtgatggc
gacacggactgtccagatggtgacgatgagtctcatgaaatttgtgcaaatgtcacctgc
cgtgccgatcatttccagtgcaaaaatcatgagtgcattcccggccacttgcagtgctct
ggcactgcagagtgctctgatggtagtgacgaggaaaattgccgtgccccacctaagcgc
tgtgatcctaaaactcaatttgactgtggtggtggaatgtgcatcaaccagagcatggtc
tgtgatcagaaaccagactgccctgcctgggaagatgaaccaaaggagctctgtaacata
aacgaatgcgcaactaagaacgggggctgctcacatatctgtgtcgatatgccagctgga
ttttattgtgattgcccctctgggtatcatctaaatgcaaacaacacatgtgaagacgtc
aatgaatgtgagatgcctggagtttgctcacagatttgcatcaatgagaaaggcaaattc
aaatgcgaatgtgttcatggatacttgagggaccctcgagatctcacaagatgtaaggca
gccgaaggacatgcttcattgctcttcacaagacgacatgatattagaaaagtttctctc
gatcatcatgacattactgcaatagtcaatgacaccaagtctgctacagctctagatttt
gtattccgtactggaatgatcttctggagtgatgttagtgacaagaaaatttacaaagca
ccaattgatgaaggtagccaaaaaacagttgttatcaaagatgacattacaacatctgat
ggacttgctgtagactggatctacaatcacatttattggactgatagttccaaagacact
attcagctagcaaactttgagggaaatatgagaaaaactgtgattaaaggaaagatggag
gaacccagatcaattgctgttaatcccttggaggggtggttgtattggacagactggggc
tcagtgccaaagatagagagagctggaatggatggatcccaccgtgaggatattgttacg
catgatatcaaatggcccaatggcttgactttagacttggttggtcggcagttgtattgg
cttgatgcaagattgcataccatttcctcctgcaactttgatggaacaaaccgtagagtt
gtattatactctgatgagtaccttctccatccattttcaatcacaacatttgaggattat
ttgtactggacagactgggaaaagcatgccgtatttagagccaataaatttaatggcagt
ggtattgaagctattactgcagtacacacactgcagaatccaatggttgtgcatgtatat
cacccctatagacagccagatggagaaaacttctgtacagctgtgaatgggcattgttct
catctctgcttaccatcacctttgatgaattcaaaatcacctcgtatatcatgtgcgtgc
cctgatgggctcacacttctttcagatggactcatgtgtgtcgaagccacaacagaatca
agagacaagacttctgcaactcctgcagaagaaacggacagcctaatggttacattgata
gtcattgcagtcatcagtatcattctactgctagcaggccttattattttcattatttac
cgtcactatatgcatcgaaatattgcaagtatgaactttgataatccagtgtatcgcaaa
accacagaggatcagtttgctctggagaaaaatcagtaccagccgacacgtgtatttcca
gccacaatagccgaagaggtggccttcaaaataaattctttatatccatgttatggattg
ttacatggctgtcgagatgaacagggcatgaatgattctttggctcaagaaccattaact
agtccaggcagcaatgattacgtatga
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