KEGG   Frankliniella occidentalis (western flower thrips): 113212834
Entry
113212834         CDS       T07591                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03018  RNA degradation
foc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113212834
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113212834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:foc03019]
    113212834
   03041 Spliceosome [BR:foc03041]
    113212834
Messenger RNA biogenesis [BR:foc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113212834
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113212834
Spliceosome [BR:foc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113212834
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 113212834
NCBI-ProteinID: XP_026287448
UniProt: A0A6J1T2G2
LinkDB
Position
Unknown
AA seq 142 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVMQKSRGRGDMKGGRGGGPGQRGRGGARGAFGGRGGRQ
GPLGRGGGLGGTGRPPNKPKKM
NT seq 429 nt   +upstreamnt  +downstreamnt
atgttaccattgtcactcctcaggactgcgcaaaaccatcctatgttggtagagttaaaa
aatggagaaacatacaatggacacttagttagctgtgacaactggatgaatatcaattta
cgagaagtgatttgcacatcaagggatggtgataagttttggaggatgccagaatgctac
atacgtggaagtaccataaaatatttgagaataccagatgaagttattgatatggttaaa
gaagaagtaatgcaaaagtcccgtggacgaggagacatgaaaggtggtcgaggtggtggc
ccagggcagaggggacgtggaggtgcacgtggtgcctttggaggacgtggaggacgacaa
ggacctttgggcaggggaggtggtcttgggggtacaggccgacctccaaacaagccaaaa
aagatgtaa

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