Frankliniella occidentalis (western flower thrips): 113212940
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Entry
113212940 CDS
T07591
Name
(RefSeq) E3 ubiquitin-protein ligase MYCBP2-like
KO
K10693
RCR-type E3 ubiquitin transferase [EC:
2.3.2.33
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
foc04121
]
113212940
Enzymes [BR:
foc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.33 RCR-type E3 ubiquitin transferase
113212940
Ubiquitin system [BR:
foc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113212940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
113212940
NCBI-ProteinID:
XP_052124547
UniProt:
A0A9C6WQJ0
LinkDB
All DBs
Position
Unknown
AA seq
2199 aa
AA seq
DB search
MLVLGNTIDIIDHVVTLEGTWVQLDKSAMTKYCFNSDGEAWSLSSGRNGAVYLQAEDELF
KEMCTDSGNPENAFGASPKKGFDFINTSPHQLMAFGLSEAEPTPAAPFKFQPHNSPGQSP
EKTSEPKGFWDEPAPSTPPKTFFFGPQTQTNVPPPPKVVPRTTSDGERRHSTCKPPPDAE
REKDGQKERRQSSDGGKFASLQRWLKGDDGKKPPERPSAPPRGDMPPELVGVSVRDLVKA
IGESSSNGNTATPPSTPKRMSRSSSPKAPLLSSSQISESSSSSPVPIPGRALSGMVLESP
SPSSSPQAAGSMGISPLVSSGMADFSSQRRSSTQSDTSAFASSLTRDQSSASPGNTRDLS
PGSSCSIQSEGSTKEDTIAKQAEQESDSSSKSVSQAYTQTSPEGTTVVKGRFSMGTAHSA
KDETRLSPKLSRKADRSLKARGGKRAVSPSPAPLPTARVIPQPVKEAVSPSVAESLRAVF
AAFLWHEGIVHDAMACASFLKFHPNLPKQGAVVVTRPQPITSKQGDKVRQRHSVEVTNAG
SYLHIQPATLESLTRSAANANANRSRTKKPQTQAEAIIREESGIPGAIDGVPLQRSGASS
SGEPLRSGIPLPTQTVAILPPALKALVLLWEQLSTSCLQAINNQAALLSPNPSTSSQARS
LHRLKQKEKAVSFKDQDANKENKDTKKSGRKKKEWRFVSGTNAGISANGAAAPALENETV
CELCGNCYPHPVTYHMRVAHPGCGAHAGGKGYNSGGNFCVGWAGNCGDGGIGGSSWYLVC
DACRDRYLRTKKSSAGQGQPGTPKKSGIPLRKRSVYSGPGTPIKMLSPGGAVPPQDVHII
MRNNAMFLLELASAAGSGLHLERRPSPNMPTVAENYSPQEASGPFTPVGPFQCLAALGAN
PSQLREDAAHSHAAAFPGYPGYAGRAAAEESNGNGHGHGGHRGGGGARPVSEFYSDMEAD
GARGRGLGLGFHRSVSMGTNGASWSRREGDGRVVMMRRRNNSGGEQVSGDGGSYLLCYPS
AALQKLVPNMDRSAIVASSSASPGTVPGTNADILSRPVMTFLFQHHNLESLQFAMKQALR
KASCRVYAMQALNWLLHNVSQPCSLHDLLWWLVAALTSSSQESEQEIEASRGDAHRKDDL
DMRSICEHPLSDISIAGEAVHPLPSTFHGLLQSVADLMLLLPPGSALQQMAVQCWGLRFT
PQDHVFLHRSQVFSNISKILSHTEEEQEDLTMSMNESHQSSFSQVYFNNVEILKDLTPDV
DIKASSRQAMVMSLTDNSTETFWESGDEDRNKTKIITITCDPRANPRMIYIHVDNCRDLA
NKVSSVILLTGQAVDELYFIQQTDVENRSTGWICCPILEANHSVIRLELKGPDNSLRLRQ
VRILGDMQGESTKVRQRSALTIQQRNCEAETLRVFRLITSQVFGKLLQQQQISDTDSQQP
SGPEQSDSAQREAEENNDLKEHMVGILFSRSKLTHLQKQVVIHIVQAIRKEALHVREEWE
ILLCSPPSASSAGLNVSFGNGDMMKQADAYCFEMLSMVLALSGSSVGKAYLSQQHGLIRD
VLSLLHTGSARVQRQVTSLLRRMLPEVAPQSLGSIMNIGQLPPADFSIVTVVSKTLSQTD
SSFDIHKVSILDVFLSCIAKALTVQVKVKGKEAGTTGAGSGKGLTTVTLATSIHPRDFVG
ARWWLRGCITRKLAEVIIQLLKDMAAGKISDSWAEVTKGAIAESILNLTRLGETERAPTE
CLRTPTLWLALAALCVLDSDHVERLSSGEWRGADGQPPPPRPLCSNHDDGETGAIIQCSV
CGNLCAECDRFLHLHRRTRMHQRQVCKEEEEAIKVDLHEGCGRTKLFWVMALADSSTLKA
MVEFRERRSGKSANFSSGTCRFCGATGNTGLLAISNVCADQECQEHAKNACTKHNPCGHV
CGGIVGETACLPCLHGCSGNPSLKQDADDMCMICFTEALSCAPAVQLSCGHVFHLHCCQN
VLSKRWPGPRITFGFSQCPICKAAIEHEVLNELLGPIKELLEDVRRKALMRLEYEGLHQT
EAITTPGARFYNDPAAYAMDRYAYYVCFKCNKAYYGGEARCDAEMGEQYDPTELVCGGCS
DVASAQMCPKHGTDFLEYKCRYCCSVAVFFCFGSTHFCNPCHDDFQRVTNIPKNELPSCP
AGPKAKQLEGDECPLHVKHPPTGEEFALGCGVCRNAHTF
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atgctagttcttgggaacaccattgatatcattgatcatgtggttactctagaaggaaca
tgggtacaactggacaagagtgccatgactaaatactgctttaactcagatggagaagcg
tggtcactatctagtggaagaaatggcgctgtttatcttcaagctgaggatgaacttttt
aaagaaatgtgcactgactctggaaatccagaaaatgcctttggtgcctcccccaagaaa
ggttttgactttatcaatacttctccacaccaacttatggcttttggactgtcagaggca
gagcccacgcctgctgcaccattcaaatttcagcctcataattcccctggccaaagtcca
gagaaaacttcagagcccaaagggttttgggatgaacctgctccttctacaccaccaaaa
accttcttttttggaccccagactcaaactaatgtacccccaccgccgaaagttgttccc
aggactacatctgatggagaaagacgtcattcaacttgtaaaccaccgcctgatgctgag
agggagaaagacggacaaaaggagaggcgccagagcagtgatggaggaaaattcgcatcc
ctacaaagatggttgaaaggagatgatggaaagaaaccaccagagcgcccttctgcccca
ccaagaggtgatatgcccccagagcttgtaggtgtctctgttagggatttggtaaaagca
attggtgaaagttcttccaatggaaatacagcaacaccaccaagcaccccaaaaagaatg
tcacgcagctctagtccaaaggcacctcttctttcctcatctcagatttcagaatcatca
tcttcaagccctgtcccaataccaggtcgtgccttgtctggcatggttttagagagtcca
agcccaagttcaagtccacaagctgcaggttctatgggaatatctccactagtgtcgagt
ggtatggcagatttttcatcacagagaaggagctccacccaaagtgacacgagtgcattt
gcgagtagtctaacaagagaccaatcttctgcgagtcctggaaacaccagagatctatct
cctggttctagctgcagcatacagtctgagggttctaccaaagaggacactattgctaaa
caagctgaacaggagtcagacagtagcagcaaatcagtcagtcaagcctacacacagact
agtccagagggaacaactgttgttaagggccgattcagtatgggtactgctcacagtgct
aaagatgaaacacgtttatctcctaaactttctcgaaaggctgacagaagtttgaaagct
cgaggtggaaagcgggctgtatccccttcccctgcgcctttacccaccgctagagtcata
ccacaacctgtgaaggaggctgtcagtccctctgtggcagaaagtttaagagcagtattt
gcagcctttttatggcatgaaggaatagtgcatgatgcaatggcctgtgcctccttcctg
aaatttcacccaaatcttcctaaacaaggagctgtggttgttacaagacctcaaccaata
actagcaaacagggtgataaagtcagacaacgccattcagtagaggtcacaaatgctgga
agctatttgcatatacaaccagccactcttgaatccctcacccgttccgctgccaatgct
aatgcgaaccgcagtcgcactaaaaagccacagactcaagcagaagcaatcattcgagaa
gaaagtggaattcctggagctattgatggtgtaccactacaacggtcaggagcttcaagc
tctggagaacccctgcgaagtgggataccgctaccaactcaaactgtagcaatcttacct
ccagcactcaaagctcttgtcctactctgggagcaattgagcaccagctgtctccaggca
atcaataaccaggcagcgttgcttagccccaacccgagcacctcctctcaagctcgatcc
ctgcatcgcctgaaacaaaaggagaaagctgtgtcattcaaggatcaagatgccaacaag
gaaaacaaggacacgaaaaagtcgggtcgcaagaagaaagaatggcgttttgtcagtggc
acgaacgctggcatttcagccaacggcgccgccgcaccggccctggagaacgagaccgtc
tgcgagctctgcggcaactgctacccgcacccggtgacgtaccacatgcgcgtggcgcac
ccgggctgcggcgctcacgcgggaggcaagggctacaacagcgggggcaacttctgcgtc
ggctgggccgggaactgtggcgacggaggcatcggcgggagctcttggtacctcgtgtgt
gatgcctgcagggatcggtatctgaggaccaagaagtcatcggccgggcaggggcagccg
ggcacgcccaagaagtcgggcattcccttgcgcaagaggagcgtgtactcggggccaggc
acccccatcaagatgctctctcccgggggcgcggtcccgcctcaagacgtgcacatcatc
atgaggaacaatgccatgttcctcctggagcttgccagcgccgccggctcgggacttcat
cttgagaggaggccgtcccccaacatgccgacggtggcggagaactacagcccgcaggag
gcgtcggggcccttcacgcccgtggggccgttccagtgcctggcggcgctcggcgccaac
ccgtcgcagctgcgcgaggacgcggcgcactcgcacgccgccgccttccccgggtacccg
ggctacgccggccgggccgccgccgaggagagcaacggcaacggccacggccacggcggc
caccgcggcggcggcggcgccaggcccgtgtccgagttctactcggacatggaggcggac
ggcgcccgcggccgcggcctgggcctcggcttccaccgctccgtgtccatgggcaccaac
ggcgcgtcctggagcagacgcgagggcgacggcagggtggtcatgatgcggcgcaggaac
aacagcggcggcgagcaggtgtccggagatggggggtcgtacttgctgtgctacccgtcg
gccgccctgcagaagctggtgcccaacatggaccgctcggcgatcgtggcgagcagctcg
gcgtcccccggcacggtgcccggcaccaatgcagacatcctgagccggcccgtgatgacc
ttcctcttccagcaccacaacctggagagcctccagttcgccatgaagcaggcgctgcgc
aaggcgtcgtgccgggtctacgctatgcaggcattaaattggcttctgcacaatgtctcg
caaccctgtagtctccatgacctactgtggtggctggtagcagctttgacatcatccagt
caagaatcagaacaagaaatagaggctagccgtggagacgctcatcgcaaagatgatttg
gatatgcgttccatttgtgaacatcctttgagtgacatcagcattgctggagaggcagtc
catccattgccatccacattccatggcctactacaaagtgtggctgatcttatgctgttg
ctgccacctggatctgcattgcaacaaatggcggtgcaatgctggggtctacgttttact
cctcaagatcatgtcttccttcataggtctcaagtatttagcaacataagtaaaatatta
tctcataccgaggaggaacaggaagatttgactatgagcatgaatgaaagccaccaatcc
agcttttcacaggtctacttcaacaatgtggaaattctcaaagatctcaccccagatgtt
gacatcaaggcatctagccgtcaagctatggtgatgagtttgactgataactcaactgag
acattttgggaatcgggtgatgaagacagaaataagaccaagataataacaattacatgt
gacccacgtgccaatcccagaatgatatatattcatgtggataactgcagagaccttgca
aataaagtttcaagtgttattcttttgactggccaagctgtagatgagttgtacttcata
cagcaaacagatgttgaaaatcgatcaacgggctggatatgttgtcccattctagaagcc
aaccattctgtcataagactggagctgaaggggccagataattctctaagattacgtcaa
gttagaattttgggtgatatgcaaggtgaaagtacaaaagtacgccagcgcagtgccctg
actattcagcaacgtaactgtgaagcagaaacactcagagttttccgcctaattacaagc
caagtttttggtaaattgctgcaacagcagcaaatttctgacactgactcccagcaaccc
tcaggccctgagcagagcgattctgctcaaagagaagctgaagagaacaatgatttgaaa
gaacacatggttggaatacttttcagtaggagcaaactaacgcacctgcagaagcaagtt
gttattcatatcgtgcaggccattcgtaaagaggcactccatgttagggaggagtgggaa
atactcctctgctcaccacccagcgcctcaagtgctggtcttaatgttagttttggcaat
ggagacatgatgaagcaagccgatgcatactgctttgaaatgctctccatggtacttgca
ttgtctggatcaagtgttggcaaggcttacttatctcagcagcatggcttgatcagagat
gtgctcagtctcttgcatacagggtcagccagagttcagagacaagtgacatcactacta
cgcagaatgcttccggaggtagcacctcagtctttaggcagcatcatgaatattggccag
ctccctcctgctgactttagtattgtaactgttgtcagtaaaactttgtcccaaacagat
tcgtcatttgatatccacaaggtcagtattttggacgtatttttgagctgcatagccaag
gccctcactgttcaggtgaaagtcaaagggaaagaagctgggacaacaggagctggtagt
ggcaaaggtctgaccactgttactttggcaacatccatccaccctcgtgattttgttggg
gctcgttggtggctgcgtgggtgtataacacgcaagcttgctgaagtgataatccagctc
ctcaaagatatggctgcaggtaaaatttctgattcctgggctgaggttaccaaaggagca
attgcggaaagtatactaaatttgactcgcctcggagaaactgaaagagctcccactgaa
tgccttcgaactcctaccttgtggcttgcccttgctgcattatgtgtgctagacagtgat
catgttgagagactttcatctggagagtggcgtggtgctgatggacagcctccaccccca
aggccattatgtagcaaccatgatgatggtgagaccggagccattattcagtgcagtgtc
tgtggtaatttgtgtgctgaatgtgatcgtttcctgcatcttcaccgacgtacccgcatg
caccagagacaggtgtgcaaagaagaggaggaagccattaaagtcgatctccatgaggga
tgcggtcgtacaaaattattttgggtaatggccttggctgacagtagtactttgaaagca
atggttgagttcagagaacggagatcagggaaatcagccaactttagttctggaacatgc
cgattttgtggagcaactggcaatacaggattacttgccatcagcaatgtatgcgctgac
caagaatgccaggaacatgctaaaaatgcatgcaccaaacataatccctgtggtcatgta
tgtggaggtattgtaggtgaaacagcatgtctaccttgtctccatggttgctcaggaaat
ccaagtttgaagcaagatgcagatgacatgtgcatgatttgcttcactgaagctctctct
tgtgctccagcagtgcagttgtcttgtggccatgtatttcatttgcactgctgccaaaat
gtgctcagcaaacgctggccaggcccaagaattacatttggattttctcagtgtcctata
tgcaaggctgcaattgaacatgaagttctaaatgaattgttagggccaattaaggaatta
ttggaagacgttcgtaggaaggcattaatgagacttgaatatgagggtctccaccagaca
gaagctatcactacacctggagctcgattttacaatgatccagcagcttatgcaatggat
cggtatgcctattatgtgtgcttcaagtgtaataaggcttattatggtggtgaagctcgc
tgtgatgctgaaatgggagagcagtatgatcctactgaactagtgtgcggaggatgcagt
gatgtagctagtgcacaaatgtgccctaaacatggcacagacttccttgaatacaaatgt
cgatattgttgctctgttgctgttttcttctgctttggttcaactcatttctgcaatcca
tgccatgatgactttcagcgagtcacaaacatccctaaaaatgagttgccaagttgtcct
gcaggtcctaaagcaaagcagctggaaggtgatgaatgcccgttgcatgtaaaacaccca
ccaactggtgaagaatttgctcttggatgtggtgtttgtcgcaatgcacacactttttaa
DBGET
integrated database retrieval system
