KEGG   Frankliniella occidentalis (western flower thrips): 113213822
Entry
113213822         CDS       T07591                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03250  Viral life cycle - HIV-1
foc03272  Virion - Hepatitis viruses
foc04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113213822
   03272 Virion - Hepatitis viruses
    113213822
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113213822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:foc04131]
    113213822
   03400 DNA repair and recombination proteins [BR:foc03400]
    113213822
Membrane trafficking [BR:foc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    113213822
DNA repair and recombination proteins [BR:foc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    113213822
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_16 AAA_22 AAA_5 AAA_14 IstB_IS21 RuvB_N DUF815 AAA_18 AAA_2 NPHP3_N nSTAND3 RNA_helicase AAA_33 nSTAND_NTPase5 SURF2 AAA_28 AAA_24 PhoH AAA_17 ResIII Mg_chelatase YhdB AAA_7 Cwf_Cwc_15 NACHT Parvo_NS1 bpMoxR
Other DBs
NCBI-GeneID: 113213822
NCBI-ProteinID: XP_026288795
UniProt: A0A6J1TD76
LinkDB
Position
Unknown
AA seq 440 aa
MSATTTLQKAIDLVTKATEEDRNKNYEEALRLYEHGVEYFLHAIKYEAQGERAKESIRSK
CLQYLDRAEKLKEYLKKKDKKKPVKADGSSKEDKKNSDNSDSDSDDPEKKKLQAKLEGAI
VVEKPHVQWADVAGLEGAKEALKEAVILPIRFPHLFTGKRIPWKGILLFGPPGTGKSYLA
KAVATEANNSTFFSVSSSDLVSKWLGESEKLVKNLFELARSHKPSIIFIDEVDSLCSSRS
DNESESARRIKTEFLVQMQGVGNDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEP
ARLIMFKLHLGNTFNTLSEDDLKQLAKKSEGYSGADISIVVRDALMQPVRKVQTATHFRK
VRGPCRKDPTVVVDDLLTPCSPGHPDAIEMTWMEVDGDKLFEPPVSMSDMERSLQTSKPT
VNDEDLIKLDKFKEDFGQEG
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgtcagctacaacaacacttcagaaagccattgacttggtcacaaaggctacggaagag
gacagaaataaaaactacgaagaagctctgagactctatgaacatggtgtcgagtacttc
ctgcatgccatcaaatatgaagcccaaggagagagggccaaagaaagtatccgctccaag
tgtttgcaatatcttgatagagctgaaaaactcaaggagtatttgaagaagaaggataag
aaaaagccagtaaaagcagatggtagctccaaggaagacaagaagaatagtgataatagt
gatagtgattctgatgatccagagaagaagaaattgcaagccaaactggaaggtgcaatt
gttgttgaaaagccccatgtgcaatgggcagatgttgctggcttagagggggcgaaagag
gctttgaaggaggctgttattttacccatcagattcccacatctattcactggaaaaagg
ataccatggaaaggcatcttgctttttggtccccctggaactggtaaatcttacctcgct
aaagccgttgcaactgaagcaaataattccacattcttttctgtctcatcatcagacctt
gtgtctaaatggcttggagaaagtgaaaaattggtgaaaaacctatttgaactagccaga
tctcacaagcctagtataattttcattgatgaggtcgattcactgtgctcttctcgttca
gacaatgaatctgaatcagctaggaggattaaaactgaatttctagtacagatgcaaggt
gttggaaatgacaatgatgggatcttggttttgggtgctacaaacataccttgggtcttg
gactctgccattaggagacgatttgagaaaagaatctacatacctctccctgaagagcct
gctaggcttatcatgttcaaacttcatttgggaaacacattcaacacactttctgaagat
gatttgaagcagttggctaagaaaagcgaaggttactcaggagcagacataagtattgtt
gttagagatgctctcatgcagcctgtccgcaaggttcagacagctacccacttcagaaaa
gtcagaggcccttgccgcaaagaccccactgtcgttgtggatgatctcttgactccatgc
tctcctggtcatccagatgctattgaaatgacttggatggaagtggatggagataaatta
tttgaaccaccagtttcaatgagtgatatggaacgttctctccagacgtccaagccaaca
gtaaatgatgaagatcttatcaagctcgataagttcaaagaagattttgggcaagagggc
taa

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