Frankliniella occidentalis (western flower thrips): 113213993
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Entry
113213993 CDS
T07591
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113213993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foc03400
]
113213993
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113213993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
113213993
NCBI-ProteinID:
XP_052128460
UniProt:
A0A9C6XRJ8
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MAVQPVHQLSMDSTQQQGFVRFFKSLPEKPATTIRFFNRVDFYTLHGSDAVYAAKEVFKT
SSVVKQIGAGDNKVDSVVLSKANFESFVRDLLLVKQYRVEVYTNKSGTRNSSDWSLEYKG
SPGNLVQFEDVLFSSQDQVVGSAVIAVKLSKDEKNKFVGVGFVETADRKFCVCEFPDDDH
FTNLEALIVQLGPKECLVPQGDGSPEQAALKKVLDRSNILVTGRKKADFSTSNLPSDLNR
LLLFKSGQQQNSLALPEMNLSTATMALAAIIKYLELGNDEGNSGQFTLTTIDIKRYVHMD
AAAVRALNLLPGPGSNSLTRHHSVLGLLDRCRTPQGHRLLGQWVKQPLRDLNAVTERHDI
VQVLCENEELRQTLTEDHLRRIPDLQALGKKLHRKKATMQDCYKIYQAVSRLPLMLESLN
NYNGGSPHPTFAAVIIDPLRDCIGEMDKFQEMIETTLDMDIVDRGEFLVKPSFDENFQDL
RNQMDELEEKLKSQLNKAARDLSLEPGKSIKLESNAQLGYYFRVTLKDEKVLRNNKNFNT
IDTNKNGVRFRDSKLEQMNSDYIATREQYQEHQKAVVDEIMNIAAGYSGTLNTLSGVVAH
LDVLTSFAVVVATAPRPYIRPKMHAEGSGILRLSQARHPCLERQDGVDYIPNDAYFQHGN
CTFHIITGPNMGGKSTYIRSVGVCVLLAQLGSYVPCDEAEISLVDAILARVGADDCQLKG
MSTFMTEMVETAGILGTATKNSLVIIDELGRGTSTYEGCGIAWAIAEHLAKDVQAFCLFA
THFHELTRLAGMLPNIKNSHVTAITTDDSLTLMYQVKDGVCDQSFGIHVAKMAKFPPHVI
EYAKRRQAELEDYQGLDFASDDTSKSKIIEEAEQIMEDFLQKCKKVCGESSSDQAKVLEE
LRAEVLSKDNAYIKTLLSQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggcagtccaaccagttcaccaactgtccatggattctactcaacaacaaggctttgtg
agattttttaagtcactgccagagaaacctgcaacaactatccgcttttttaatcgagta
gacttttatactcttcatggatctgatgctgtttacgctgccaaagaagtttttaaaact
tcatctgttgtcaaacaaattggagcaggtgacaataaagtagattctgttgtattgagt
aaagcaaactttgaatcatttgttagagatttacttcttgtaaaacagtacagagttgaa
gtctacaccaataaaagtggtacacgtaattcaagtgattggtctttggaatataagggc
tctcctggcaatctagtgcagtttgaggatgtgctctttagttcccaagaccaagttgtt
ggatctgctgtcattgctgtaaaactgagtaaagatgaaaaaaacaaatttgttggagtt
ggctttgttgaaacagcagaccggaaattctgtgtgtgtgaatttcccgatgatgaccat
tttactaacttggaagctttaattgtccagttgggcccaaaagaatgcctggtacctcaa
ggagatggttcacctgaacaagcagcattgaaaaaggtcttagatagaagtaatattctt
gttactggccgtaaaaaggcagatttttccacttccaatctacccagtgacctcaacaga
cttcttttatttaaaagtggacagcaacagaattctttggctttaccagaaatgaacctg
tctactgctacaatggccttggctgcaattataaagtatttggagcttggaaatgatgaa
ggcaacagtggtcagtttacacttactacaattgatatcaaacgatatgttcatatggat
gctgctgctgtacgggccttaaaccttttgccagggcctggctccaactccctaacacgg
catcatagtgtattagggcttcttgatagatgccgaactcctcaaggtcatcgacttcta
ggccagtgggtcaaacagcctcttagagatcttaatgctgttactgaaagacatgatata
gtgcaggtgttgtgtgaaaatgaggaattgcgtcagacgctgacagaagaccatttaaga
agaattcctgatctccaagcccttggaaagaaattgcatagaaaaaaggcaaccatgcaa
gattgctacaaaatataccaggctgtgtcacgtctccctctaatgctggaatctcttaac
aattacaatggaggcagcccacatccaacatttgcagcagtaatcattgatccgcttcgt
gattgtattggtgaaatggacaagttccaggagatgatagaaactacactggatatggat
attgttgaccgtggggagtttcttgtcaaaccttcatttgatgaaaatttccaagacctt
cgtaatcagatggatgaattggaggaaaagttaaaatctcaacttaacaaagcagcaaga
gacctcagtctggaacctggaaaatccataaaattagaatctaatgctcagttgggttat
tacttccgcgtcactctaaaggatgaaaaagttcttaggaataataaaaattttaatacc
attgataccaacaaaaatggtgtaaggtttcgagattcaaaactggagcagatgaattcg
gactacattgccacacgagaacaatatcaagagcaccaaaaagctgttgtggatgaaatc
atgaacattgcagctggatattctggaacactcaacactcttagtggggttgtggctcat
ttggatgtcctgacaagctttgctgttgtggtggcaacagcccctagaccatatatacgt
cctaaaatgcatgcagaaggctctggtatattgcgcctttctcaagctcgccatccctgc
ttggagcgtcaggatggagttgattacatacctaatgatgcttattttcaacatggaaat
tgcacttttcatattataactggtccgaatatgggcggtaaaagtacttacattcgatca
gttggggtctgtgttcttcttgctcagttgggttcttacgtaccttgtgatgaagcagaa
atttcattggttgatgctatacttgctcgagtaggtgctgatgactgccagctgaagggc
atgtcaacgttcatgactgagatggtggaaacagctggaattttagggactgccactaag
aactctcttgtgattattgacgagttgggtcgaggcacatcaacttatgaaggatgtggt
attgcatgggctattgcagagcacttggctaaagatgttcaagcattttgcttgtttgcc
acacatttccatgaacttactaggcttgctggaatgctaccaaatatcaaaaatagtcat
gtgactgctatcacaactgatgattccctgactctaatgtatcaagtgaaagatggtgtc
tgtgaccaaagttttggaattcatgtagccaagatggctaaatttcctccacatgtaatt
gagtatgcgaaaaggagacaagcagaacttgaagattaccaaggtcttgactttgcttct
gatgacacatccaaatcgaagattattgaggaagcagagcaaatcatggaggatttcctt
cagaaatgtaaaaaggtatgtggagaatcatcatctgatcaggctaaagtattagaagaa
ttacgtgcagaagttttgtcaaaagacaatgcttacatcaaaacattactctctcaataa
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