Frankliniella occidentalis (western flower thrips): 113214070
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Entry
113214070 CDS
T07591
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113214070
Membrane trafficking [BR:
foc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
113214070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
113214070
NCBI-ProteinID:
XP_026289117
UniProt:
A0A6J1T8B2
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MYFPIGWPRVLSFPQHGQCSIRQVICNRDKILFAILTDDTLSIWFCKPCLPIVSHRRPRE
SVQAVGSNESVEWRPDSSMLVVITSAGYMLMYRLGVRPDQKGLYEQVDSPTPSMRRDSAE
LFLQESIPPLLLTLEQEISVFDGSLTCLACIRDELMIATTQGHILRYRWDGHQNRDYNLD
LRRIPFSIDQQVSKAIPIVESNTYVISIDYSPLVGGFAVVLNDGRAAFLTASTLKFDPNV
TPKEEDCNSSSFEKWMQVQGIWAQNVDDATCAAVNHKYRLIAFGRKNSQATVYCVDETTG
GLEVTHQIVLSPKDYPGCPGRVRCIRWTPDGRCVALAWANGGLSLWSTFGALLLCSLGWD
YGLNSESASASLLNIQSMEWSAEGYQLWMVRRLPDRDLGEDDGLDQPTDAVVLLDFVKSA
LTVNPCMGHLTHLYLQGEDKLFINLGGTGLSSPKKSADETKGHGALFVPGPGLAFAEPTK
STTSGVGTNSQLMGSKQWVVVPLPSTYSAANWPIRYTAMDLSGEHLAVAGRAGLALYSVA
NRKWKLFGSESQERDIIVSGGLLWWGSYVVLAAYSVASDCDQLRLYPRDSRLDNSFATVT
RLPAQALLLNILQDRLVTFCSDARVTIYALALKDNISSGPSVEVTALQMIDISALCVHPA
CVVSLALTPLRTESGRSHSQQNSQQMESIVMNVSGRLLMVQREHGGRVDPQIPHSSELFQ
CTPPTVLASCVEHVWVPNRSVPEKPHLTEALWLFCGAHGMRVWLPLFPRSKDNQHSFMAK
RIMLPFHLRIYPLAILFEDAILLGAENDTLLYTSDTKSPFSLPFCVLERTSQVYLHQILR
QLIRRNLGYHAWEIARSCTALPYFPHSLELLLHEVLEEEATSKQPIPDALLPSVVEFIQE
FPVYLETVAHCARKTEIALWPYLFSAAGKPKDLFQECLARWQLDTAASYLIILQNLEPST
VSRQYATLLLDAALENCHWELSKDLVRFLRAIDPNDVESPRASFVMPSHSLRYGLSPQSP
PLSPSQEDLTLVLGTMQVSRGRSFSTTLTPKLDAGGKDYPSGSSNLLPLRRDSILKGNTG
IGSPSPTPGVAVPLRRKKSVPTGRGDSRDLSGSAEEFFMDVILQRHARRLLSTRRLADLG
RFAARLDFHLVAWLARERERAARVDEPVAALQQLHADFHWPHPAVMSPLALGLDPKKSSI
LTEEHLQTLSIDVTSVPPGLTGNIGSGSRIGDSGYMSQSGVPNRLLPHNYTDYLSSPNCV
EEARLVPHTVADDRSIVSEESSYWGDEKERDRGQYSPDDVSGTWSQAAADMTSTLEQLTM
EGSIRGSQKVEVQLRYLLQLMTEAGCLEWALILAILLHDALAVVRTTAAARAPSQSYSCV
LRLRDTITTLTSWSNTECIGYKPFMMAIQGQVGVLTKLMTNKQQHQMQQYQLHQQLHQQQ
VTPQGVQNPTTNAAFCIENGNNQEYITTESLPMKADRTIVTPSSSRPRSDTASSSSTVMT
AGPLPSTVTSQESGIDTVQEGIDVGKVEEENPMPLEAKPEAESGCTIS
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtactttccgattgggtggccgagggtcttgagtttccctcaacatgggcaatgttcc
atccgtcaagttatttgtaatagagacaaaattctcttcgctattttgacagacgatact
ctgtcaatttggttttgtaagccatgtctcccaattgtgtcacatcgacgtccacgagag
tctgtacaggcagttgggagcaacgagtctgtagaatggagaccagattccagcatgctt
gtcgttattacatcagcagggtatatgcttatgtatcgccttggggtacgacctgatcag
aaaggtctctatgagcaggttgactcacctacacctagtatgagaagggatagtgcagaa
cttttcttgcaagaatcaataccaccattacttcttacactggaacaagaaattagtgtt
tttgatggttccctaacatgtttagcatgtatcagagatgaattaatgatagcaacaact
cagggccatattttacgttatcgttgggatggacatcaaaatagagactataatttggat
ctacgaagaattcctttttcaattgatcaacaagtctccaaagctattccaattgttgaa
tccaatacatatgttattagtattgattattcaccccttgttggtggttttgctgtagtc
ctaaatgatggacgggctgcttttcttactgcctctaccttgaaatttgaccccaatgtg
accccaaaagaagaggactgtaattcaagcagttttgaaaaatggatgcaagttcagggt
atttgggctcaaaacgttgatgatgctacctgtgctgctgttaaccataagtacagactt
attgcctttggaaggaagaattctcaggcaacagtgtactgtgtggatgaaacaactggt
ggtctagaggttactcatcaaatagtcctctctcccaaagactatcctggttgtccaggg
agagtacgctgcatacggtggactccagatgggcgttgtgttgccctagcatgggctaat
ggtggtctttcactgtggagcacttttggagcccttctgttatgttcgcttggatgggat
tacggcttaaacagtgaatctgcaagtgctagtcttttaaacatacagagcatggaatgg
agtgcagaagggtatcaactgtggatggtacgtaggctacctgatcgagatctcggagaa
gatgatggattagaccaacccacagatgctgtggtattacttgattttgtgaaaagtgct
cttactgtcaatccttgtatgggtcatttgactcacctttatctacaaggagaagataag
ttgtttattaatttaggtggtactggtttatccagccctaaaaaatctgctgatgagact
aaaggccatggagcattatttgtgccgggtcctgggctagcttttgcagaacccaccaaa
agtacgaccagtggtgttggtaccaacagtcaattaatggggagtaagcagtgggttgtt
gtacctttaccctcaacatattctgctgccaattggcccatacggtatacagccatggat
ctctctggagagcatcttgcagttgctggaagagccggcttagctctatactctgtagcc
aaccgcaaatggaaactttttggaagtgaaagtcaagaaagagatattatagtatctggg
ggactactttggtggggttcctatgtagtcctggccgcctacagtgtggcttccgactgt
gatcaacttcgtctttatccacgggattctcgacttgacaattcatttgcaactgttaca
aggttaccagctcaggctttgctgttgaacattcttcaagatcgtcttgtaactttctgc
tcagatgctagagtcacaatctatgcccttgctctaaaagataatatcagttcaggtcct
tcagtggaagttaccgctcttcagatgattgacataagtgccttgtgtgtccacccagca
tgtgttgtctctcttgctttgacacctctccgcactgaatctggaagaagtcattcacaa
caaaattctcaacaaatggagagtattgttatgaatgtcagtggaagattgctaatggtt
caaagagaacatggtggaagagttgatcctcaaatacctcacagcagtgaactgtttcag
tgcaccccacctactgttttggcttcctgtgttgagcatgtttgggttccaaaccgcagt
gtgccagaaaaaccacatcttacagaggccttgtggcttttctgtggggcacatggtatg
cgagtttggctgcctctctttccacgatccaaagacaaccagcatagttttatggccaag
cgcatcatgctcccatttcatctacggatctatcccttagcaattctttttgaagatgcc
atacttcttggagctgaaaatgacacacttctttatacatctgataccaaaagtccgttt
tcattacctttttgtgtacttgaacgcactagccaagtttatcttcatcaaatcttacgt
caactaattcgacgcaaccttggttatcatgcttgggaaatagctcggagctgtactgct
ttgccatattttcctcactctttagaattacttttgcatgaggttttggaagaggaagct
actagcaagcaaccaattcctgatgctctgttgcctagtgttgtggaatttattcaagaa
ttccctgtttatctagaaactgttgctcactgtgcaagaaaaacagaaattgccctatgg
ccatatcttttttcagcggctggtaaacccaaggatctttttcaggaatgtttggcaaga
tggcagctggatactgcggcatcctatcttattattcttcagaacttggagccatctact
gtgagccgtcaatatgccactcttctcttggatgcagcgctagaaaattgtcactgggag
ctttccaaagacttggtacgattcttacgagctatagatcccaatgatgttgagtctcca
cgtgcatcctttgttatgccgtctcactctctacgatatgggctaagtccacagtctcct
cctttgagtcctagtcaagaagatttgactttagttcttggtaccatgcaagtttcacgt
ggacgcagctttagcacaacactcactccaaaattagatgctggaggaaaggactatcca
tccggtagtagtaatcttttaccactccgacgagatagtattctaaaaggcaatacagga
atcggaagcccttctcctactcctggtgttgctgtgcccttacgacgaaagaaatctgtt
ccaacaggaagaggagattcaagggacttatctggttcagcagaggaattttttatggat
gttattcttcaacgacacgcacggcgattgttgtctacgcgtcgtttggctgacttggga
cggtttgcggctcgtctagactttcatctcgtagcctggctggcccgagaaagggaaaga
gctgcccgcgtggatgagcctgtcgctgcgctgcagcagcttcatgctgattttcattgg
cctcatccagcagtgatgtctcctctcgccctaggcctcgaccccaaaaaatcaagcatt
ctcactgaagagcatttacagacgctgagtatagatgtcacaagtgtacctccaggtttg
actggaaatattgggagtggaagcagaataggagacagtggttatatgagtcagtctggt
gttcccaatcgacttctgcctcacaattatacagattacctgagtagtccaaactgtgta
gaagaagcaaggctggtacctcacacagttgcagatgatagaagtatagtcagcgaagaa
agctcttactggggggatgaaaaagaaagagatagaggtcagtactcacctgatgatgta
agtggaacatggagccaagctgctgcagatatgacaagcacgttagagcagttaactatg
gagggttcaatcagggggtcccaaaaagttgaagtacagttacgatatcttctccagtta
atgacagaagcaggttgtctggaatgggctttaatcttagcaatcctactgcatgatgcc
ctagctgtagtgcgcaccacagctgcagctcgagcaccttctcagtcatattcttgtgtg
ctgcgtttgcgtgacacaattactacattaacgagctggagcaacacagaatgcattgga
tacaaaccatttatgatggcaattcaaggacaagttggtgtacttactaaattgatgacg
aataagcagcagcaccagatgcagcaatatcagctacatcaacaactacatcaacagcag
gttacccctcagggtgttcaaaaccctaccaccaatgcagccttttgcattgagaatggg
aacaatcaagaatacattacaacagagtcattaccaatgaaagctgatcgtactattgtg
acccctagtagtagtcgcccaagatccgacacagccagcagttcttcaactgtaatgaca
gcaggtcctttacctagtactgttacttctcaggaaagtggcattgacacagttcaagaa
ggtattgatgttggcaaagtagaagaggaaaatccaatgccactagaagcaaagccagaa
gcagagtcaggatgtactatttcgtaa
DBGET
integrated database retrieval system
