KEGG   Frankliniella occidentalis (western flower thrips): 113214114
Entry
113214114         CDS       T07591                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03013  Nucleocytoplasmic transport
foc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113214114
  09122 Translation
   03013 Nucleocytoplasmic transport
    113214114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:foc03019]
    113214114
   03041 Spliceosome [BR:foc03041]
    113214114
Messenger RNA biogenesis [BR:foc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113214114
Spliceosome [BR:foc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113214114
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_DCAF12 Beta-prop_DCAF4 BBS2_Mid Beta-prop_WDR19_1st WD40_like Beta-prop_Vps41 WDR54 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 113214114
NCBI-ProteinID: XP_026289168
UniProt: A0A6J1T7C4
LinkDB
Position
Unknown
AA seq 332 aa
MVDRINYNTVLSQVFSPCGNFLAASNTYGDIAVYSLNNVTNPSEVSKSSNGIQHPSHHIR
PLEGGNICSLTSTPKFLIAGGIGEIKGQTWDSVTGGKKEKPRFKVLIPAQRERSEQTDVN
SLQYNSADERLCAGCGDNNIYIFNLESGKLIRTLSGHTGFIHSINLSENQLVSASEDGTV
RLWDMRQTAATNIIKPFENPRLNRPELGKWVGAAALSDDWLLLCGGGPRLSVWHLRSMEV
TTVFPMKDLKGVHVAKFHEDRVFAGGAGPHFYQFSLNGQVYGQIPTSASTVYSAELQETP
QRILSIAGSSPYIDICTTFNYLDQKLAFALPA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggtagaccgtattaattacaatactgtactctcgcaagtcttttctccgtgtggaaac
ttcttagccgcttccaacacttacggggatatcgctgtctacagtttgaacaatgtcaca
aacccttctgaagtgtcaaagtcatcaaatggaatacaacatccctcacaccatattcgt
ccattagaaggaggcaacatttgctctttaacgtctactcccaaatttctcattgctggt
ggcatcggtgaaattaaaggtcagacatgggactctgtcaccggaggaaaaaaagagaag
ccccgcttcaaagtattgataccagcacagagagaacggtcagagcagacagatgtaaat
tcgctacagtacaatagtgctgatgaacgtctctgtgcagggtgtggtgataacaatatt
tacatttttaatttggaaagtggtaaattgattagaacgctatcgggccacactggattt
atccattcaatcaatttaagtgaaaaccaacttgtatctgcaagtgaagatgggactgtc
cgattgtgggatatgaggcaaactgctgccacgaacataattaaaccctttgaaaatccc
agactcaaccgacctgagttgggcaagtgggttggtgctgctgcattaagtgatgattgg
ctgctgctgtgtgggggaggtcctagactttcagtgtggcatcttcggtccatggaagtg
accactgtatttccgatgaaggatttaaaaggtgttcatgttgccaaatttcatgaagac
cgtgtatttgctggtggtgctggtccacacttctatcagtttagtttgaatggtcaagtt
tatggccaaattcccacttcagcctctacagtttattctgctgaattacaagaaactcct
caaaggattctctcaatcgctggttctagcccctacatagacatttgtacaaccttcaat
tacctggatcagaagcttgcatttgcattaccagcatga

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