Frankliniella occidentalis (western flower thrips): 113215275
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Entry
113215275 CDS
T07591
Name
(RefSeq) receptor-mediated endocytosis protein 6 homolog isoform X2
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
foc04131
]
113215275
Membrane trafficking [BR:
foc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113215275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
Motif
Other DBs
NCBI-GeneID:
113215275
NCBI-ProteinID:
XP_026290672
UniProt:
A0A6J1TD26
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MEDNASASSLQWDMLDLADRLRQERLFVSSEQEHLKELNAKVVSVSSCLAQKAWIMVQQR
ANLNRLILARPDCPPSVCCQRAIALEGTQFIDGDKELPFQDCLSFGEFMQTLRTSPHLLA
ACLAAGDRLMPETMPTIINTLYGGLFGSCLLPEDKLLVLRLLRHLTQIQLVPLENPRRML
RHGSSALARMYALFHEGLFSAKIFLTAALHDPIMQLLMEDESFLDIDPDKAVVRFAPDEQ
LKKFGKKGTPEYDLRLHEYRSWTVVNLVGLVQHFVVSLRENMHCFPTSIRWLVRQISGML
SKSGQLKPKEVFDICVDLIFSFLICPAIVNPEQHGITDAPVSYIARFNLIQVAQILQVLA
SRKYQDVDPKVWDLYSQFDKDILSSLVDGLLEGAANGLLEEPVISESSKLQGLSRSAALL
TEAELYGLVNFLQMVQASTSPDAAGLFDEAGVDRKLLAALLAQLPPTAIATAASFSQPTS
NMNGNMSSPSGGPAQGPSSSGNNSKLNNLSPPHAANGNGSSPDTPNRKASIIGKGVAVAM
SKTSKAIRSVAGSGDSVDENLGNEGVEDGLDVPKYSVLVIPFSPDRGQYVGLLPEQKVLN
IDCEAQKNIPTGSAVHLSVAGSSSVRVLGIPPERSESLEKRTRFSLSHDEGSIGNTSDNL
EAVSEAASNHSVASSLELENEDQDQNDNLSDMVSANVSGRGTPNISGRDTPSSQITEGDE
GARNVAIEPRPNYDLPPPPPPTKQSRSDIDDKFGKFEIKKLLEGDETTSLVSDTWSTDVL
ASDSELIEQSDRERERERERNYAQQPPLLPLALQPPLVPLPGILPGPPGSAQQSLIDMSE
TASEAWSTDVLASDSERMLEIDTDDTSSVARSDDTARSEVESRGEPEGGDDTPPLSSAGA
AVFRPIRDEGRPASVSSLASSASGMVPPSPTRSDTVAHHSWNVTGRGGGRADYRRRTLEY
IDNNARAQAAAISRPTPLPITHEETRIPPIGRSQSVPVSPPLSAVSDPTTASPLLRPEPS
STPLNPLSVSASSLIPVPSNSTPSSSNASMLPGPSEVLIDIDRGDEAASQIASHASTASL
TSSSSSAGGASGGPSGSGGSSSAQPPPPALTSTPTPDLPAPAPVLANGSICGVGAVPRTG
IATGAIPKSISFDKTAERGDKELLDDDQKHKRGFFRNFKLTFNKNRRGKSLNRSGDDMGR
YDSLDGDGPHLRLRRGPPEEEKGAYAESSEDILAKYRRKPSSGADSAASESSGRVPLSAA
SLSERDAEQGREDERLFIDPNNVEASYAFKDAKRKLRMVLSTADLHHVPWRSQCPNKVDD
PLLRKDNELIAFLKMQLAEAINLQDRALAAHLHETLRCIKLFNNDGCQKLFHSLKEDYRQ
RTPYTAYLVRCRQGLLSTLAHLERMIERIRCEGVICNRCIVSVCVRMFLERREGQVNDFT
LEFQQLTLADEKTDLLERFLLTVAADMERDPFWSGVNKEQLDQARTAIEQAIISRVYPYA
LYPNGEGDMLRDKVLHNHMKKLSEIITPNHKDIDIAKMFHYECPWPSAQAEIASISAYKT
PQDKLQCVSRCATTIMNLLKMVQERNVPAADDLVPVLVFVLIKANPPALLSTVQYVNTFY
GSRLEGEEHYWWTQFCSAIEYIKTLDYRD
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggaggataacgcatctgcatcatcccttcagtgggacatgcttgatctagctgaccgt
cttcgccaggaacgactttttgtgtcttcagaacaggaacacttaaaagaactcaatgcc
aaggtggtttcagtttcatcatgtttagctcagaaggcttggatcatggttcagcaaagg
gcaaacctgaatagacttatattagctaggcctgactgtcctccttcagtttgttgccaa
cgtgcaattgcacttgagggcactcagtttattgatggagacaaagagctccctttccag
gattgtctatcatttggtgaatttatgcaaacattgcgtacttcaccccacctccttgca
gcttgtcttgctgctggtgatagactcatgccagaaacaatgcctacaatcataaatact
ctgtatggaggactgtttgggtcttgtttgttgcctgaagacaaacttcttgtcttacgt
ctgctgcgacatttgacacagatccagcttgtgccattggaaaatcctcgaaggatgctt
agacatggttcgtctgctcttgccagaatgtatgctttattccatgaaggtctgttctcc
gctaaaatatttttaacagcagcattgcatgatccaattatgcagttactcatggaagat
gagtcctttctagacattgaccctgacaaggctgtagtgagatttgctccagatgaacag
ctgaaaaagttcggcaagaaaggtacaccagaatatgacttgcgcttgcacgaatatcgc
agttggacagtggtcaatcttgtgggattagtgcaacattttgtcgttagtctgagagaa
aatatgcattgtttcccaacttctattcgatggcttgttcggcaaatatcagggatgctc
agcaaatctggacagctgaaacctaaggaggtctttgacatctgtgtggaccttatcttc
tcctttctgatttgccctgcaattgtaaatccagagcagcatggtattactgatgcacct
gtcagttatatcgcaagatttaatctaattcaggttgctcaaattttacaagtcctggcc
tcccgcaaatatcaagatgtggatcctaaagtgtgggatctgtattcacaattcgataaa
gacatattgtcttctcttgttgatggactcttagaaggtgcagccaacggactcttggaa
gaaccagtcatatcagagagtagtaaattacaaggactgtcccgctctgctgctctcttg
acagaggctgagctctatggcttggtgaatttcctccagatggtccaggctagtactagt
cctgatgcagctggactctttgatgaagctggagtcgacaggaaactcctggcagctctt
cttgcacaacttccaccaacagccattgctactgctgcatctttttcacagcctaccagc
aacatgaatggcaatatgtcatctccatctggtggtccagctcaaggtccttcctcctca
ggaaataattctaagctaaacaatttgtctcctccacatgcagcaaatgggaatgggtcc
tcaccggacacgcccaacaggaaggctagcataataggaaaaggggttgcagtagctatg
agtaaaacttcaaaggctatccgcagtgtggcagggtctggtgatagtgttgatgaaaac
cttggaaatgagggtgttgaagatgggttggatgtgccaaagtacagtgtgctggtcata
cccttctctcctgataggggacagtatgttggccttctccctgagcagaaagttttgaac
attgattgtgaggcacaaaaaaatatcccaactggatctgctgtccaccttagtgtggct
ggttcatcttctgtaagagtactgggcattcctcctgaacgctcagagagtttggagaag
cgcacaaggttctctttatctcatgacgaagggtcaattgggaacacaagtgacaatctt
gaagcagtttcagaagctgcttctaaccatagtgtagcttcatctctggaactagagaat
gaagatcaagatcaaaacgacaacttgtcagacatggtgtcagccaatgtgtctggaaga
ggaactcccaatatatcaggacgtgatacaccttcttcacagatcacagagggtgatgaa
ggagcaaggaatgttgccattgagccacgtcctaactatgatctcccacctccaccacct
ccaaccaagcaaagccgctccgatattgatgataaatttggaaagtttgaaatcaaaaaa
ttgcttgaaggtgatgagactacatctcttgttagtgatacctggagcacagatgtcctt
gccagtgatagtgaactgattgagcaaagtgatagagagcgtgagcgtgaacgtgaacgc
aactatgctcaacaaccccccttgttgccactcgctttacagccacctttagtcccactt
ccaggtattttacctggtcctcctggttcagctcaacaaagtttgattgatatgtctgaa
actgcttctgaagcatggagcacagatgttcttgcttcagactcagagcgcatgcttgaa
atagacactgatgatactagcagtgttgctagatctgatgataccgcaagatcggaggtt
gaaagccggggtgaacctgaaggtggtgatgatacccctccattgagttcagctggtgct
gcagtttttcgtccaattcgagatgaaggcagaccagcaagcgtgtctagtttggctagt
tctgccagtggaatggtgccaccttccccaacgagaagtgatactgttgctcatcattct
tggaatgtaactggaagaggagggggccgtgcagattatagaagacgcacccttgaatat
attgataacaatgctcgtgcacaagcagctgccatcagccgaccaactccattgcccatc
actcacgaagagactcgcattccaccaattggccgcagtcaaagtgttccagtttcacca
cctctgtctgcagtcagtgatcctaccacagcctctccgttgcttcgtcctgagccatct
tccacccctctaaatccgctttcagtatctgcttcctcactgattcctgtgccttccaat
tccacaccatcctcctccaatgcttcaatgcttcctggaccttctgaggtgttgattgac
attgatcggggagatgaagctgcttctcagatagcaagtcatgccagcacagcgagtttg
acttcctcgagtagtagcgctggcggtgccagtggtggccccagtggaagtggtggaagc
agtagtgcacaaccacctccacctgcactgacctcaacacccactccggacttgccagct
cctgcgcccgtgctagccaacggtagtatttgtggggttggcgctgtccctcgtacaggc
attgctactggagccattccgaagagcatcagctttgacaagacggctgaaagaggagac
aaagagctcctggatgatgaccaaaaacacaaacgtggtttcttcagaaactttaaacta
acatttaacaagaatcgtcgtgggaaaagtctaaaccggtctggtgatgacatggggcgg
tatgacagtctggatggtgacggtccgcatctccgtctgagacgtgggcctcctgaagaa
gaaaagggagcttacgctgagtcttccgaagacatccttgccaagtatcgtcggaagccc
agctctggtgccgattcagctgcttccgagtcatccgggagggtaccgctgtccgctgct
agtctctctgaacgcgacgcagagcagggcagggaggacgaaaggctttttattgatcct
aataatgtggaggcatcttacgctttcaaggatgcaaagagaaaacttagaatggtctta
agcactgccgatctgcatcatgtgccctggcgctctcagtgccctaacaaagttgatgat
ccattgttgaggaaagataatgagttgattgcatttttgaaaatgcagctggcagaggcc
ataaatttgcaagatcgagctctagctgcccacttgcatgaaacattacgctgcattaaa
ctgttcaacaatgatggatgtcagaaacttttccattctcttaaagaggactatcgacaa
agaactccttatactgcatatcttgtcagatgccgtcaaggtttactatccaccctggct
catcttgaaagaatgattgagcgtattagatgtgagggagtgatatgcaatcgatgtatt
gtttcggtgtgcgtccgaatgttcttggaaagaagggaaggacaggtcaatgactttact
ctggagttccaacagctaacccttgcagatgaaaaaacagatcttctagagagatttttg
ctaactgttgctgctgatatggaaagagatccattctggtcaggtgttaacaaagagcaa
ttagatcaagctcggactgcaattgaacaagctattataagcagagtatatccatatgct
ctgtatcccaatggggaaggtgacatgttacgcgataaagtgcttcataatcatatgaaa
aagttatctgaaattattacaccaaaccacaaagatattgatattgccaagatgtttcac
tatgagtgcccatggccttccgcccaagcagaaattgcttccatctctgcatacaagaca
cctcaggacaagctgcaatgtgtgtcccgttgtgcaactacaattatgaatttgttaaag
atggttcaagaacgcaatgttccagctgctgacgatcttgttcctgtgctggtttttgtt
cttataaaggctaatccaccagctctcctatccactgttcaatatgtgaacacattttat
ggaagcagattagaaggagaggaacattattggtggactcagttctgctctgccattgag
tacataaagaccttggactacagggattga
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integrated database retrieval system
