Frankliniella occidentalis (western flower thrips): 113215319
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Entry
113215319 CDS
T07591
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113215319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
foc03041
]
113215319
Spliceosome [BR:
foc03041
]
Complex C
Other components
Step II factors
113215319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
PQQ_2
Beta-prop_DCAF12
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_HPS5
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
113215319
NCBI-ProteinID:
XP_026290715
UniProt:
A0A6J1TG44
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MLGLQEYGSSSDSEAASDSEGSALHLKPLETSISTKIVSLCAAPDVVPLGAVDPRPLVDP
TSKEIMFNLKYDDLYAPELGPFNPNQTQQQKAQRNMLSGFVEPAHMDAFQFENQRRTFTS
YGFALDPSVDANTVEGAKVVGSELALQETGGKTVFESTSKRPLDKRKRNKNDQPEDVEGF
LGPWGTYVDEKRVMKPNEEEAAELEEILAKRQKKGKQVDERPIEEKTVLHIKEPFDYQGR
SFMHPPQDVGVNLKSDTPPDRCFLPKNLIHTWEGHTKGISQIRWLPKTAHLLLSCSMDCR
VKIWEVYNERRCVRTYYGHRQAVRDIAFNNGGNNFLSAAYDRYVKLWDTETGDCISRFTS
RKTPYCCKFHPDEDKQHLFVAGTSDKKIICWDTRSGEIVQEYDRHLGSVNTITFVDENRR
FVTTSDDKSLRVWEWDIPVDMKYIADPTMHSMPAVTLSPNYKWLACQSMDNKIVVFSALN
RFKMNRKKTFSGHMVAGYACSLDFSPDMSYVVSGDADGKVYVWDWKTTKLFKKWKAHDGV
CISTLWHPHEPSKVVSAGWDGKLKFWD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgctaggactacaagaatacggtagcagtagtgatagtgaggcagcgtcggattccgag
ggctcagctcttcatttaaaacctttagaaacatctatttctaccaaaattgtgtctttg
tgtgctgcccctgatgttgtacccttgggtgcagtagaccctcgtccactagttgatcct
acgtccaaagaaataatgttcaacctaaaatatgacgatttatatgccccagagctgggg
ccttttaatcctaatcaaacccaacaacagaaagctcagagaaatatgctttctggcttt
gtggaaccagcacacatggatgcctttcagtttgaaaatcaaaggcggacatttactagt
tatggatttgccctagatcctagcgtggacgccaacacagtggagggtgctaaggttgtt
ggctcagaactggctttacaagaaacaggcggaaagactgtatttgaatcaactagtaaa
agacccctagacaaacggaaacgcaataaaaatgaccaaccagaggatgttgagggcttc
ttaggtccttggggtacttatgttgatgaaaagagagtgatgaaaccaaatgaagaagaa
gcagctgaattagaagaaattcttgctaaaagacagaagaaaggaaagcaggttgatgag
agacctattgaagaaaagacagttcttcacattaaggaacctttcgactaccaaggccgc
tcattcatgcaccctcctcaggatgtgggcgtaaatttgaaatcagacacaccaccagat
cgttgcttcttgcctaaaaatcttattcacacgtgggagggtcatacaaaaggaatatct
caaattcgctggctaccgaagactgcccacttacttttatcatgtagtatggattgtcgt
gtgaagatctgggaagtctacaatgaaagaagatgtgtaaggacctactatgggcatcgt
caggctgtgcgagatattgcattcaataatggtgggaacaactttttgtctgctgcttat
gatagatatgtcaagttgtgggacacagaaacaggagattgcatatcccgtttcactagt
cggaaaacaccttattgttgcaagtttcatcctgatgaagataaacagcatctgtttgtt
gctggaacatctgacaaaaaaattatctgttgggacacgcgatctggagaaattgttcag
gaatatgatcgacatttaggatcagtcaacactataacatttgtggacgaaaaccgtcgg
tttgtgacaacatcagatgacaaaagcttgcgtgtttgggaatgggacattccagtcgac
atgaagtacatcgctgatccaactatgcactcaatgccagctgtaactctctctccaaac
tacaagtggcttgcttgccagtcaatggacaataaaattgttgtcttctctgctctcaac
cgcttcaaaatgaatcgaaagaagacattttctggtcacatggtggctggttatgcttgt
tcacttgacttctctccagatatgagttatgttgtttctggtgatgccgatggaaaagtt
tacgtgtgggactggaagactacaaaattgtttaaaaaatggaaagcacatgacggggtc
tgtatatcaacactgtggcatcctcatgagcccagtaaggttgtctctgcaggttgggat
ggtaaactcaaattctgggactaa
DBGET
integrated database retrieval system
